Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 2.0e-110 402.5 217 100.0
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 4.9e-40 168.7 168 55.4
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 4.2e-39 165.6 170 55.3
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 1.5e-36 157.1 169 50.3
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 9.6e-36 154.5 177 48.0
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 9.6e-36 154.5 169 48.5
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 2.8e-35 152.9 172 48.8
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 3.7e-35 152.5 183 48.6
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 8.1e-35 151.4 174 47.7
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 1.8e-34 150.2 180 47.2
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 1.8e-34 150.2 170 46.5
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 2.4e-34 149.8 174 47.7
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 9.0e-34 147.9 183 46.4
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 1.2e-33 147.5 181 46.4
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 2.6e-33 146.4 175 43.4
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 4.5e-33 145.6 168 48.8
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 5.8e-33 145.2 185 44.3
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 7.6e-33 144.8 173 50.3
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 7.6e-33 144.8 175 44.0
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 1.0e-32 144.4 176 46.6
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 1.7e-32 143.7 209 42.1
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 6.5e-32 141.7 169 48.5
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 8.4e-32 141.4 173 45.1
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 1.1e-31 141.0 200 43.5
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 2.5e-31 139.8 174 44.8
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 4.2e-31 139.0 173 46.2
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 7.1e-31 138.3 180 47.8
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 7.1e-31 138.3 170 48.2
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 7.1e-31 138.3 170 48.2
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 7.1e-31 138.3 173 45.7
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 1.2e-30 137.5 171 50.3
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 1.2e-30 137.5 196 41.3
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 2.1e-30 136.7 170 47.6
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 4.6e-30 135.6 173 46.2
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 6.0e-30 135.2 178 44.9
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 7.9e-30 134.8 173 45.1
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 1.3e-29 134.0 174 44.3
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 1.3e-29 134.0 175 44.0
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 1.3e-29 134.0 165 43.6
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 3.0e-29 132.9 173 45.1
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 3.9e-29 132.5 177 45.8
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 5.1e-29 132.1 172 47.7
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 8.7e-29 131.3 173 45.7
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 8.7e-29 131.3 178 44.9
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 1.1e-28 131.0 175 43.4
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.1e-28 131.0 149 50.3
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 1.5e-28 130.6 173 45.7
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 3.3e-28 129.4 159 51.6
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 4.3e-28 129.0 144 48.6
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 7.4e-28 128.3 181 42.5
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 7.4e-28 128.3 157 49.0
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 1.3e-27 127.5 168 45.2
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 2.8e-27 126.3 177 46.9
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 2.8e-27 126.3 179 44.1
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 6.3e-27 125.2 177 46.3
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 6.3e-27 125.2 181 42.5
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 8.2e-27 124.8 174 43.1
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.4e-26 124.0 180 43.3
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 1.8e-26 123.6 151 49.7
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 2.4e-26 123.2 173 41.0
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 4.1e-26 122.5 176 45.5
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 1.5e-25 120.6 152 48.7
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 2.0e-25 120.2 175 43.4
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 2.6e-25 119.8 182 42.9
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 4.5e-25 119.0 175 42.3
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 7.6e-25 118.2 176 42.0
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 1.0e-24 117.9 149 44.3
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 8.5e-24 114.8 125 50.4
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 8.5e-24 114.8 165 44.2
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 1.1e-23 114.4 182 41.8
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 1.4e-23 114.0 166 42.2
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 1.4e-23 114.0 165 42.4
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 3.2e-23 112.8 166 44.0
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 3.2e-23 112.8 166 44.0
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 2.7e-22 109.8 175 40.6
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 3.6e-22 109.4 147 45.6
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 4.6e-22 109.0 183 39.3
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 7.9e-22 108.2 154 41.6
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 1.8e-21 107.1 170 42.4
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 5.1e-21 105.5 147 46.3
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 5.1e-21 105.5 164 42.1
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 5.1e-21 105.5 164 42.1
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 8.7e-21 104.8 164 40.9
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 1.5e-20 104.0 188 38.3
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 1.9e-20 103.6 167 41.3
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 2.2e-19 100.1 164 42.1
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 3.7e-19 99.4 148 41.9
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 8.2e-19 98.2 154 42.9
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 8.2e-19 98.2 154 42.9
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 2.4e-18 96.7 142 45.1
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 2.4e-18 96.7 129 45.0
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 5.3e-18 95.5 108 49.1
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 6.9e-18 95.1 159 39.6
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 3.4e-17 92.8 124 41.1
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 9.4e-15 84.7 101 46.5
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.0e-13 81.3 178 36.0
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 5.1e-13 79.0 189 34.4
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 1.1e-12 77.8 126 43.7
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 4.4e-12 75.9 105 42.9
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 4.4e-12 75.9 105 41.9
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 4.4e-12 75.9 148 39.9
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 5.7e-12 75.5 89 50.6
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 1.8e-10 70.5 180 33.9
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 2.4e-10 70.1 161 31.7
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 2.1e-06 57.0 161 32.9
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 2.1e-06 57.0 161 32.9


User provided reference genes

Program Settings