Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.N018500 Gossypium raimondii HOM05D000871 ORTHO05D047226 1.3e-36 156.0 82 100.0
Gohir.D04G172866 Gossypium hirsutum HOM05D000871 ORTHO05D047226 4.0e-35 151.0 82 97.6
Gorai.N018600 Gossypium raimondii HOM05D000871 ORTHO05D000770 1.3e-33 146.0 82 95.1
Gohir.A04G128124 Gossypium hirsutum HOM05D000871 ORTHO05D000770 3.0e-30 134.8 82 90.2
Gorai.012G162300 Gossypium raimondii HOM05D000871 ORTHO05D000770 1.6e-28 129.0 83 85.5
Gohir.A04G128400 Gossypium hirsutum HOM05D000871 ORTHO05D000770 8.1e-28 126.7 83 85.5
Gorai.012G163000 Gossypium raimondii HOM05D000871 ORTHO05D000770 1.4e-27 125.9 82 81.7
Gohir.D04G172900 Gossypium hirsutum HOM05D000871 ORTHO05D000770 4.0e-27 124.4 82 80.5
Gohir.A04G128500 Gossypium hirsutum HOM05D000871 ORTHO05D000770 6.9e-27 123.6 83 85.5
Gohir.A04G127918 Gossypium hirsutum HOM05D000871 ORTHO05D000770 3.8e-25 117.9 82 78.0
Gorai.012G162100 Gossypium raimondii HOM05D000871 ORTHO05D000770 2.7e-23 111.7 82 74.4
Duzib248G0183 Durio zibethinus HOM05D000871 ORTHO05D000770 8.1e-20 100.1 82 72.0
Gohir.D04G172700 Gossypium hirsutum HOM05D000871 ORTHO05D000770 3.8e-17 91.3 86 68.6
Thecc.02G034300 Theobroma cacao HOM05D000871 ORTHO05D000770 6.5e-17 90.5 82 72.0
Gohir.D04G172800 Gossypium hirsutum HOM05D000871 ORTHO05D000770 8.4e-17 90.1 86 67.4
Gorai.012G162900 Gossypium raimondii HOM05D000871 ORTHO05D000770 8.4e-17 90.1 86 67.4
Gorai.012G162400 Gossypium raimondii HOM05D000871 ORTHO05D218782 1.4e-16 89.4 86 67.4
Thecc.02G034400 Theobroma cacao HOM05D000871 ORTHO05D000770 5.5e-16 87.4 82 69.5
Gorai.012G162800 Gossypium raimondii HOM05D000871 ORTHO05D218978 1.9e-13 79.0 84 63.1
Gohir.D04G172833 Gossypium hirsutum HOM05D000871 ORTHO05D000770 2.5e-13 78.6 41 97.6
Gohir.A04G128106 Gossypium hirsutum HOM05D000871 ORTHO05D000770 5.7e-13 77.4 86 60.5
Gohir.A04G128100 Gossypium hirsutum HOM05D000871 ORTHO05D000770 7.4e-13 77.0 47 85.1
Gohir.A04G128112 Gossypium hirsutum HOM05D000871 ORTHO05D000770 3.1e-11 71.6 86 61.6
COL.COLO4_17831 Corchorus olitorius HOM05D000871 ORTHO05D000770 1.5e-10 69.3 74 59.5
Thecc.02G034200 Theobroma cacao HOM05D000871 ORTHO05D000770 1.0e-09 66.6 79 50.6
Duzib052G1239 Durio zibethinus HOM05D000871 ORTHO05D000770 8.4e-09 63.5 76 57.9
Duzib248G1223 Durio zibethinus HOM05D000871 ORTHO05D000770 8.4e-09 63.5 77 53.2
Duzib132G0101 Durio zibethinus HOM05D000871 ORTHO05D000770 1.1e-08 63.2 85 50.6
COL.COLO4_17829 Corchorus olitorius HOM05D000871 ORTHO05D000770 1.4e-08 62.8 80 60.0
CiPaw.05G024700 Carya illinoinensis HOM05D000871 ORTHO05D000770 9.3e-08 60.1 88 51.1
CSS0005808 Camellia sinensis var. sinensis HOM05D000871 ORTHO05D000770 1.2e-07 59.7 83 51.8
arahy.Tifrunner.gnm1.ann1.J8Q3D1 Arachis hypogaea HOM05D000871 ORTHO05D000770 2.7e-07 58.5 90 46.7
Dinv16050 Davidia involucrata HOM05D000871 ORTHO05D000770 2.7e-07 58.5 86 45.3
Actinidia28009 Actinidia chinensis HOM05D000871 ORTHO05D000770 3.5e-07 58.2 87 47.1
Duzib052G0528 Durio zibethinus HOM05D000871 ORTHO05D000770 4.6e-07 57.8 87 48.3
Lj4g0016542 Lotus japonicus HOM05D000871 ORTHO05D000770 4.6e-07 57.8 78 47.4
arahy.Tifrunner.gnm1.ann1.F74L81 Arachis hypogaea HOM05D000871 ORTHO05D000770 1.0e-06 56.6 90 44.4
Atru.chr2.2134 Acer truncatum HOM05D000871 ORTHO05D000770 3.0e-06 55.1 73 53.4
CANSAT25G0545 Cannabis sativa HOM05D000871 ORTHO05D000770 3.0e-06 55.1 86 46.5
Atru.chr2.2138_Atru.chr2.2139_Atru.chr2.2141 Acer truncatum HOM05D000871 ORTHO05D000770 3.9e-06 54.7 75 52.0
Aqoxy6G02965 Aquilegia oxysepala HOM05D000871 ORTHO05D000770 3.9e-06 54.7 74 50.0
RcHm_v2.0_Chr7g0177181 Rosa chinensis HOM05D000871 ORTHO05D000770 3.9e-06 54.7 83 49.4
MSTRG.5303 Avicennia marina HOM05D000871 ORTHO05D000770 5.1e-06 54.3 82 43.9
Manes.10G091832 Manihot esculenta HOM05D000871 ORTHO05D000770 5.1e-06 54.3 86 47.7
QL11p027722 Quercus lobata HOM05D000871 ORTHO05D000770 5.1e-06 54.3 86 46.5
SalBow6G6822 Salvia bowleyana HOM05D000871 ORTHO05D000770 5.1e-06 54.3 83 49.4
Lj4g0009126 Lotus japonicus HOM05D000871 ORTHO05D000770 6.7e-06 53.9 79 44.3
Psat7g104480 Pisum sativum HOM05D000871 ORTHO05D000770 6.7e-06 53.9 82 46.3
Thecc.02G034100 Theobroma cacao HOM05D000871 ORTHO05D000770 6.7e-06 53.9 89 46.1
Sabra19G0028600 Salix brachista HOM05D000871 ORTHO05D011596 8.7e-06 53.5 86 45.3


User provided reference genes

Program Settings