Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 2.1e-288 995.0 481 100.0
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 3.1e-244 848.2 483 83.9
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 3.7e-237 824.7 480 82.9
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 6.7e-223 777.3 379 98.2
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 4.0e-207 724.9 470 73.0
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 1.6e-203 713.0 474 71.9
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 3.5e-203 711.8 473 71.0
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 3.8e-202 708.4 474 70.5
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 5.5e-201 704.5 480 70.0
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 7.2e-201 704.1 471 70.7
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.4e-201 703.7 474 70.3
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.4e-201 703.7 474 70.0
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.7e-200 702.2 474 70.5
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 2.7e-200 702.2 405 81.5
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.6e-200 701.8 474 70.5
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.1e-200 701.0 474 70.0
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.1e-200 701.0 474 70.0
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 6.1e-200 701.0 477 71.1
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.0e-199 698.7 475 70.1
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.0e-199 698.4 474 70.0
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.0e-199 698.4 474 69.4
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.8e-199 697.2 474 69.4
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-198 696.4 474 69.8
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.4e-198 695.3 474 69.2
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.5e-198 694.1 474 69.8
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 2.2e-197 692.6 478 67.6
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 1.7e-194 682.9 476 68.9
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 2.3e-194 682.6 474 67.7
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 4.7e-192 674.9 471 70.1
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 3.0e-191 672.2 402 78.6
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 1.3e-189 666.8 479 67.0
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 2.8e-189 665.6 469 69.3
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 5.9e-187 657.9 402 76.6
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 1.3e-186 656.8 475 65.7
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 1.7e-186 656.4 473 66.4
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 6.6e-186 654.4 475 66.7
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 1.9e-185 652.9 402 74.1
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 2.5e-185 652.5 475 65.5
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 5.6e-185 651.4 480 65.0
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 2.8e-184 649.0 469 67.2
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 3.6e-184 648.7 468 65.2
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.0e-183 647.1 476 65.1
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 1.4e-183 646.7 400 75.8
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 5.2e-183 644.8 402 74.4
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 8.9e-183 644.0 480 64.0
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 5.8e-182 641.3 401 75.6
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 7.5e-182 641.0 414 71.0
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.3e-181 640.2 476 65.5
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 1.7e-181 639.8 470 66.0
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 2.2e-181 639.4 472 64.8
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 3.7e-181 638.6 447 68.2
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.1e-180 637.1 473 65.5
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 1.1e-180 637.1 473 67.0
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 1.9e-180 636.3 480 66.2
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 3.2e-180 635.6 480 64.6
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 1.2e-179 633.6 472 65.3
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 1.6e-179 633.3 473 64.9
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 2.0e-179 632.9 471 66.5
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 2.7e-179 632.5 402 73.4
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 6.6e-178 627.9 473 64.5
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 6.6e-178 627.9 402 72.1
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 6.6e-178 627.9 406 70.2
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 1.1e-177 627.1 472 64.6
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 1.9e-177 626.3 472 64.8
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 4.7e-176 621.7 362 78.2
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 5.2e-175 618.2 396 71.2
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 2.6e-174 615.9 478 63.4
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 1.9e-172 609.8 475 63.2
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.9e-172 609.8 401 70.1
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 1.6e-171 606.7 403 71.2
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 2.1e-171 606.3 402 70.4
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 6.0e-171 604.7 473 63.2
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 2.3e-170 602.8 473 63.0
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 2.3e-170 602.8 403 69.5
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 6.6e-170 601.3 396 71.7
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 1.5e-169 600.1 395 70.1
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 6.8e-167 591.3 404 68.8
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 6.4e-165 584.7 368 72.3
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 7.1e-164 581.3 466 62.2
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 2.7e-163 579.3 393 69.7
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 3.0e-162 575.9 402 67.2
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 6.2e-160 568.2 368 69.8
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 1.4e-159 567.0 356 74.7
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 2.0e-158 563.1 476 57.4
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 9.9e-158 560.8 358 70.7
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 7.1e-156 554.7 346 74.3
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 2.7e-155 552.7 481 56.5
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 3.5e-155 552.4 428 62.9
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 1.7e-149 533.5 475 55.6
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 6.4e-149 531.6 441 60.1
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 2.1e-147 526.6 474 58.0
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 3.9e-130 469.2 394 56.6
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 6.7e-130 468.4 294 74.8
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 7.6e-126 454.9 404 54.2
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 2.2e-120 436.8 357 60.5
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 9.0e-119 431.4 447 51.7
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 1.3e-109 401.0 407 49.4
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 2.6e-94 350.1 294 58.2
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 6.8e-90 335.5 431 42.9
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 2.6e-89 333.6 209 75.1
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 2.7e-86 323.6 455 41.5
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 3.2e-71 273.5 450 38.9
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 2.8e-67 260.4 302 46.0
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 9.2e-63 245.4 402 37.8
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 7.8e-62 242.3 161 67.7
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 8.9e-42 175.6 200 48.5
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 4.4e-41 173.3 411 28.5
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.6e-30 138.3 93 72.0
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 2.5e-28 131.0 303 31.4
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 6.7e-21 106.3 292 29.5
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 2.4e-18 97.8 69 71.0
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 6.0e-14 83.2 58 63.8
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 8.2e-11 72.8 111 38.7


User provided reference genes

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