Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 7.1e-217 756.9 366 100.0
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.7e-205 719.2 366 96.2
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 2.7e-171 605.5 368 81.5
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 3.2e-164 582.0 350 84.3
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 2.2e-149 532.7 281 94.7
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 1.8e-135 486.5 374 65.2
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 6.8e-135 484.6 374 64.7
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 9.9e-134 480.7 374 64.7
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.9e-133 479.2 374 64.2
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 6.4e-133 478.0 374 64.2
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 9.3e-132 474.2 380 63.4
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 2.1e-131 473.0 412 60.7
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 3.0e-130 469.2 378 64.6
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 2.4e-127 459.5 371 64.2
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 9.0e-127 457.6 378 64.0
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 5.4e-124 448.4 376 62.0
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.2e-123 447.2 421 56.3
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 2.7e-123 446.0 410 58.5
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 5.1e-122 441.8 370 60.5
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 3.3e-121 439.1 449 54.1
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 7.4e-121 438.0 408 59.1
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 1.6e-120 436.8 370 60.3
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.6e-120 436.8 395 58.5
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 6.2e-120 434.9 372 60.2
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 5.3e-119 431.8 374 59.4
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 3.4e-118 429.1 371 60.1
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 3.4e-118 429.1 370 60.3
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 9.9e-118 427.6 374 58.8
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.1e-116 424.1 373 59.8
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 1.1e-116 424.1 370 59.5
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 5.5e-116 421.8 456 51.5
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 1.2e-115 420.6 376 57.7
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 2.1e-115 419.9 374 59.1
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 2.7e-115 419.5 374 58.0
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 4.6e-115 418.7 386 58.0
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 1.3e-114 417.2 373 58.7
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 2.3e-114 416.4 388 57.2
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 1.1e-113 414.1 453 51.2
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 5.6e-113 411.8 373 57.6
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 9.6e-113 411.0 312 67.9
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 9.6e-113 411.0 286 68.9
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 9.6e-113 411.0 377 58.4
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 1.6e-112 410.2 373 57.6
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 1.1e-111 407.5 423 53.2
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.1e-111 407.5 373 56.6
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 3.1e-111 406.0 384 58.3
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 4.0e-111 405.6 375 57.6
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 6.9e-111 404.8 372 56.2
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 6.9e-111 404.8 346 59.2
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 2.0e-110 403.3 396 56.8
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 4.5e-110 402.1 374 56.1
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 7.6e-110 401.4 402 53.2
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 4.9e-109 398.7 374 55.3
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 4.2e-108 395.6 419 53.2
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 3.5e-107 392.5 454 49.6
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 4.6e-107 392.1 264 69.7
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 4.6e-107 392.1 374 57.0
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 1.8e-106 390.2 364 55.5
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 9.6e-105 384.4 389 55.0
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 1.3e-104 384.0 365 53.2
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 1.4e-103 380.6 376 54.0
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 1.4e-103 380.6 346 56.6
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 6.9e-103 378.3 360 56.4
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 2.2e-101 373.2 364 53.0
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 8.5e-101 371.3 288 62.5
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 1.1e-100 370.9 385 51.7
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 1.9e-100 370.2 263 69.2
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 4.2e-100 369.0 306 59.5
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 4.2e-100 369.0 375 52.8
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 1.6e-99 367.1 352 55.1
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 4.6e-99 365.5 396 51.8
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 1.0e-98 364.4 396 51.8
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 1.0e-98 364.4 367 54.5
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 3.9e-98 362.5 363 53.2
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 3.9e-98 362.5 363 53.2
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 5.1e-98 362.1 270 64.1
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 1.1e-97 360.9 268 64.9
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 8.2e-96 354.8 388 50.8
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 7.7e-94 348.2 400 49.8
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 7.7e-86 321.6 367 49.9
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 8.5e-85 318.2 399 45.9
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 1.4e-82 310.8 396 47.0
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 2.0e-81 307.0 382 48.2
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 3.3e-81 306.2 271 58.7
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 9.7e-81 304.7 347 51.9
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 9.7e-81 304.7 285 57.5
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 1.4e-79 300.8 425 44.7
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 1.1e-76 291.2 294 55.8
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 2.0e-73 280.4 278 50.7
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 7.5e-73 278.5 188 70.7
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.7e-72 277.3 180 72.8
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 4.1e-71 272.7 275 53.5
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 3.2e-68 263.1 257 53.7
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 5.5e-68 262.3 374 44.1
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 8.0e-67 258.5 286 52.1
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 6.3e-56 222.2 360 41.7
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 2.0e-54 217.2 205 51.2
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 7.3e-52 208.8 238 50.4
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 4.0e-50 203.0 152 63.2
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 3.4e-49 199.9 115 79.1
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 6.4e-48 195.7 177 57.6
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 2.3e-45 187.2 246 41.9
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 2.1e-43 180.6 357 37.0
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.3e-37 160.6 225 47.1
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 1.1e-34 151.8 97 75.3
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 2.6e-33 147.1 86 74.4
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 2.6e-33 147.1 311 33.1
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 2.9e-32 143.7 89 70.8
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 1.6e-27 127.9 129 54.3
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.6e-27 126.7 212 37.7
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 3.4e-25 120.2 139 43.2
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 1.4e-23 114.8 225 36.9
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 1.6e-19 101.3 153 41.8
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.5e-17 94.7 86 50.0
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 6.0e-14 82.8 62 62.9
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 3.9e-13 80.1 47 72.3
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 4.3e-12 76.6 136 37.5
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.9e-07 61.2 184 29.9


User provided reference genes

Program Settings