Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.013G149500 Gossypium raimondii HOM05D004608 ORTHO05D006533 1.8e-232 808.9 419 100.0
Gohir.D13G133200 Gossypium hirsutum HOM05D004608 ORTHO05D006533 3.1e-224 781.6 419 97.9
Gohir.A13G130142 Gossypium hirsutum HOM05D004608 ORTHO05D006533 6.1e-220 767.3 419 95.7
Duzib213G0525 Durio zibethinus HOM05D004608 ORTHO05D006533 3.0e-203 711.8 419 89.0
COL.COLO4_07760 Corchorus olitorius HOM05D004608 ORTHO05D006533 3.2e-197 691.8 419 86.6
Thecc.07G005400 Theobroma cacao HOM05D004608 ORTHO05D006533 5.7e-194 681.0 420 85.2
Gorai.009G453300 Gossypium raimondii HOM05D004608 ORTHO05D006533 6.1e-188 661.0 421 81.9
Gohir.D05G386600 Gossypium hirsutum HOM05D004608 ORTHO05D006533 1.4e-187 659.8 421 81.7
Potri.001G469300 Populus trichocarpa HOM05D004608 ORTHO05D006533 1.5e-186 656.4 420 81.4
Gohir.A04G003100 Gossypium hirsutum HOM05D004608 ORTHO05D006533 3.4e-186 655.2 420 80.7
Potri.011G166100 Populus trichocarpa HOM05D004608 ORTHO05D006533 2.2e-185 652.5 420 81.0
Ciclev10008478m.g Citrus clementina HOM05D004608 ORTHO05D006533 2.4e-184 649.0 421 80.3
Eucgr.F03661 Eucalyptus grandis HOM05D004608 ORTHO05D006533 3.1e-184 648.7 423 80.6
QL08p001615 Quercus lobata HOM05D004608 ORTHO05D006533 3.1e-184 648.7 418 80.9
TWI38G2408 Tripterygium wilfordii HOM05D004608 ORTHO05D006533 5.4e-184 647.9 420 80.0
PGR031G2516 Punica granatum HOM05D004608 ORTHO05D006533 1.2e-183 646.7 420 79.5
TWI38G1265 Tripterygium wilfordii HOM05D004608 ORTHO05D006533 2.0e-183 646.0 420 79.8
Prupe.6G031700 Prunus persica HOM05D004608 ORTHO05D006533 2.7e-183 645.6 420 80.5
Sabra16G0318300 Salix brachista HOM05D004608 ORTHO05D006533 1.0e-182 643.7 424 79.7
CiPaw.12G141700 Carya illinoinensis HOM05D004608 ORTHO05D006533 3.8e-182 641.7 421 80.0
MD03G1039600 Malus domestica HOM05D004608 ORTHO05D006533 6.5e-182 641.0 420 80.0
Glyma.18G072500 Glycine max HOM05D004608 ORTHO05D006533 8.5e-182 640.6 422 79.4
Cfa016939 Carpinus fangiana HOM05D004608 ORTHO05D006533 1.5e-181 639.8 420 79.5
MD11G1040100 Malus domestica HOM05D004608 ORTHO05D006533 2.5e-181 639.0 420 79.5
THA.LOC104815684 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 3.2e-181 638.6 424 80.2
Cpa.g.sc12.91 Carica papaya HOM05D004608 ORTHO05D006533 5.5e-181 637.9 420 80.7
Glyma.08G337500 Glycine max HOM05D004608 ORTHO05D006533 2.1e-180 636.0 422 78.9
Lj1C897G12 Lonicera japonica HOM05D004608 ORTHO05D006533 8.0e-180 634.0 421 78.6
Atru.chr2.3848 Acer truncatum HOM05D004608 ORTHO05D006533 1.8e-179 632.9 417 80.3
VMungo0540G0162 Vigna mungo HOM05D004608 ORTHO05D006533 6.3e-177 624.4 422 77.3
Ca_14850_v3 Cicer arietinum L. HOM05D004608 ORTHO05D006533 8.3e-177 624.0 425 78.1
Phvul.006G060300 Phaseolus vulgaris HOM05D004608 ORTHO05D006533 8.3e-177 624.0 422 78.2
RcHm_v2.0_Chr5g0075221 Rosa chinensis HOM05D004608 ORTHO05D006533 8.3e-177 624.0 420 78.1
Sp3g11470 Schrenkiella parvula HOM05D004608 ORTHO05D006533 1.1e-176 623.6 419 78.3
Hund22995 Selenicereus undatus HOM05D004608 ORTHO05D006533 5.4e-176 621.3 419 76.4
Rhsim06G0233900 Rhododendron simsii HOM05D004608 ORTHO05D006533 2.0e-175 619.4 419 77.1
arahy.Tifrunner.gnm1.ann1.R4UTE8 Arachis hypogaea HOM05D004608 ORTHO05D006533 2.7e-175 619.0 426 77.7
Sed0006020 Sechium edule HOM05D004608 ORTHO05D006533 4.5e-175 618.2 417 77.5
vmacro11628 Vaccinium macrocarpon HOM05D004608 ORTHO05D006533 1.3e-174 616.7 432 75.2
Thhalv10020839m.g Eutrema salsugineum HOM05D004608 ORTHO05D006533 1.7e-174 616.3 419 77.1
DCAR_017596 Daucus carota HOM05D004608 ORTHO05D006533 2.3e-174 615.9 414 76.8
AL3G25090 Arabidopsis lyrata HOM05D004608 ORTHO05D006533 2.9e-174 615.5 424 76.9
AT3G13235 Arabidopsis thaliana HOM05D004608 ORTHO05D006533 2.9e-174 615.5 423 77.1
TPR.G17932 Trifolium pratense HOM05D004608 ORTHO05D006533 3.8e-174 615.1 422 76.8
CAN.G492.45 Capsicum annuum HOM05D004608 ORTHO05D006533 6.6e-174 614.4 419 76.4
GSVIVG01014786001 Vitis vinifera HOM05D004608 ORTHO05D006533 8.6e-174 614.0 421 77.4
Haze_09894 Corylus avellana HOM05D004608 ORTHO05D006533 1.1e-173 613.6 431 75.6
HanXRQChr11g0334621 Helianthus annuus HOM05D004608 ORTHO05D006533 1.5e-173 613.2 419 76.6
EL10Ac4g07509 Beta vulgaris HOM05D004608 ORTHO05D006533 2.5e-173 612.5 419 75.9
CsaV3_7G021370 Cucumis sativus L. HOM05D004608 ORTHO05D006533 3.3e-173 612.1 417 77.5
Lj6g0013957 Lotus japonicus HOM05D004608 ORTHO05D006533 4.3e-173 611.7 420 76.7
SGA_v2.0_scaffold168G38588 Striga asiatica HOM05D004608 ORTHO05D006533 5.6e-173 611.3 420 75.7
CANSAT11G0422 Cannabis sativa HOM05D004608 ORTHO05D006533 9.5e-173 610.5 424 74.5
ECA236G2785 Erigeron canadensis HOM05D004608 ORTHO05D006533 9.5e-173 610.5 420 76.4
C01p51800 Brassica napus HOM05D004608 ORTHO05D006533 1.6e-172 609.8 420 76.4
CARHR087890 Cardamine hirsuta HOM05D004608 ORTHO05D006533 2.1e-172 609.4 423 76.4
Cc05_g15480 Coffea canephora HOM05D004608 ORTHO05D006533 2.1e-172 609.4 420 76.0
HanXRQChr05g0160221 Helianthus annuus HOM05D004608 ORTHO05D006533 2.8e-172 609.0 422 75.6
Sabra11G0139800 Salix brachista HOM05D004608 ORTHO05D006533 3.6e-172 608.6 457 72.4
arahy.Tifrunner.gnm1.ann1.EI2AUC Arachis hypogaea HOM05D004608 ORTHO05D006533 4.7e-172 608.2 440 74.5
CSS0047803 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 4.7e-172 608.2 419 75.9
C03p46240 Brassica napus HOM05D004608 ORTHO05D006533 1.0e-171 607.1 427 75.6
FvH4_3g42010 Fragaria vesca HOM05D004608 ORTHO05D006533 1.4e-171 606.7 420 76.2
Migut.M01599 Erythranthe guttata HOM05D004608 ORTHO05D006533 1.8e-171 606.3 423 74.7
ClCG09G021670 Citrullus lanatus HOM05D004608 ORTHO05D006533 2.3e-171 605.9 439 74.5
BraA03t12964Z Brassica rapa HOM05D004608 ORTHO05D006533 3.0e-171 605.5 421 76.2
A03p38110 Brassica napus HOM05D004608 ORTHO05D006533 4.0e-171 605.1 421 76.2
BolC3t16895H Brassica oleracea HOM05D004608 ORTHO05D006533 4.0e-171 605.1 429 75.1
FAN16G3187 Fragaria x ananassa HOM05D004608 ORTHO05D006533 4.0e-171 605.1 431 74.7
Actinidia30368 Actinidia chinensis HOM05D004608 ORTHO05D006533 1.5e-170 603.2 419 75.9
Lalb_Chr15g0082461 Lupinus albus HOM05D004608 ORTHO05D006533 2.6e-170 602.4 420 75.5
Sed0022757 Sechium edule HOM05D004608 ORTHO05D006533 3.4e-170 602.1 417 76.5
FAN25G0703 Fragaria x ananassa HOM05D004608 ORTHO05D006533 7.5e-170 600.9 431 74.2
Lsat_1_v5_gn_7_116460 Lactuca sativa HOM05D004608 ORTHO05D006533 9.8e-170 600.5 421 75.8
Sopen10g001840 Solanum pennellii HOM05D004608 ORTHO05D006533 9.8e-170 600.5 419 75.4
Solyc10g005890.3 Solanum lycopersicum HOM05D004608 ORTHO05D006533 1.3e-169 600.1 419 75.2
Aqoxy4G02317 Aquilegia oxysepala HOM05D004608 ORTHO05D006533 1.7e-169 599.7 421 75.1
PGSC0003DMG400014406 Solanum tuberosum HOM05D004608 ORTHO05D006533 4.9e-169 598.2 414 75.6
MELO3C013214.2 Cucumis melo HOM05D004608 ORTHO05D006533 8.3e-169 597.4 417 76.0
Aa31LG8G500 Aethionema arabicum HOM05D004608 ORTHO05D006533 1.4e-168 596.7 432 73.1
FAN21G2140 Fragaria x ananassa HOM05D004608 ORTHO05D006533 3.2e-168 595.5 451 71.4
PSO541G2325 Papaver somniferum HOM05D004608 ORTHO05D006533 7.0e-168 594.3 421 71.7
A01p40280 Brassica napus HOM05D004608 ORTHO05D006533 1.2e-167 593.6 421 74.8
Oeu026626.2 Olea europaea HOM05D004608 ORTHO05D006533 1.2e-167 593.6 428 73.8
BraA01t04064Z Brassica rapa HOM05D004608 ORTHO05D006533 1.6e-167 593.2 422 74.6
Carub.0003s1265 Capsella rubella HOM05D004608 ORTHO05D006533 1.6e-167 593.2 423 74.9
MSTRG.7029 Avicennia marina HOM05D004608 ORTHO05D006533 2.0e-167 592.8 422 73.7
FAN11G3108 Fragaria x ananassa HOM05D004608 ORTHO05D006533 3.5e-167 592.0 451 71.0
Nn1g07694 Nelumbo nucifera HOM05D004608 ORTHO05D006533 1.0e-166 590.5 419 73.7
AUR62017165 Chenopodium quinoa HOM05D004608 ORTHO05D006533 2.1e-164 582.8 417 73.1
CSS0013715 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 3.1e-163 578.9 419 74.9
AUR62035639 Chenopodium quinoa HOM05D004608 ORTHO05D006533 8.9e-163 577.4 417 72.9
MBI14_g00953_MAGBIO Magnolia biondii HOM05D004608 ORTHO05D006533 1.2e-162 577.0 419 71.6
Dinv40894 Davidia involucrata HOM05D004608 ORTHO05D006533 2.0e-162 576.2 368 81.8
Nitab4.5_0007214g0010 Nicotiana tabacum HOM05D004608 ORTHO05D006533 1.4e-160 570.1 419 72.6
Peaxi162Scf00219g00158 Petunia axillaris HOM05D004608 ORTHO05D006533 1.4e-160 570.1 422 72.3
THA.LOC104801910 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 4.6e-159 565.1 370 80.0
THA.LOC104810298 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 4.6e-159 565.1 370 80.0
Os02g0198600 Oryza sativa ssp. japonica HOM05D004608 ORTHO05D006533 1.9e-157 559.7 425 70.1
Manes.05G206400 Manihot esculenta HOM05D004608 ORTHO05D006533 1.2e-156 557.0 346 83.2
Duzib268G0270 Durio zibethinus HOM05D004608 ORTHO05D006533 2.1e-156 556.2 420 72.4
Psat5g164640 Pisum sativum HOM05D004608 ORTHO05D006533 9.8e-154 547.4 358 78.8
ATR0587G001 Amborella trichopoda HOM05D004608 ORTHO05D006533 2.9e-153 545.8 399 71.9
Hma1.2p1_0193F.1_g084100 Hydrangea macrophylla HOM05D004608 ORTHO05D006533 7.3e-149 531.2 486 62.6
Hma1.2p1_2995F.1_g331425 Hydrangea macrophylla HOM05D004608 ORTHO05D006533 7.3e-149 531.2 486 62.6
BolC1t05127H Brassica oleracea HOM05D004608 ORTHO05D006533 1.8e-147 526.6 419 69.5
HPP92_021912 Vanilla planifolia HOM05D004608 ORTHO05D006533 3.1e-147 525.8 424 67.0
TAR624G0837 Trochodendron aralioides HOM05D004608 ORTHO05D006533 5.2e-147 525.0 421 67.9
TAR626G0684 Trochodendron aralioides HOM05D004608 ORTHO05D006533 3.6e-140 502.3 325 79.1
Zm00001eb205890 Zea mays HOM05D004608 ORTHO05D006533 3.1e-139 499.2 357 73.1
Nitab4.5_0001622g0040 Nicotiana tabacum HOM05D004608 ORTHO05D006533 1.4e-136 490.3 356 71.9
Pp3c4_20890 Physcomitrium patens HOM05D004608 ORTHO05D006533 3.3e-133 479.2 425 60.5
AagrBONN_evm.TU.Sc2ySwM_117.3155 Anthoceros agrestis HOM05D004608 ORTHO05D006533 6.4e-121 438.3 432 54.6
Oeu019694.2 Olea europaea HOM05D004608 ORTHO05D006533 5.1e-118 428.7 435 58.6
Oeu019695.1 Olea europaea HOM05D004608 ORTHO05D006533 1.9e-112 410.2 415 57.6
Mapoly0030s0110 Marchantia polymorpha HOM05D004608 ORTHO05D006533 1.2e-111 407.5 380 56.8
Sc03g0011700 Simmondsia chinensis HOM05D004608 ORTHO05D006533 1.8e-110 403.7 281 74.7
Ah.06g180960 Amaranthus hybridus HOM05D004608 ORTHO05D006533 1.1e-104 384.4 336 61.9
unitig_899.g15266 Utricularia gibba HOM05D004608 ORTHO05D006533 1.4e-104 384.0 332 65.4
Actinidia10581 Actinidia chinensis HOM05D004608 ORTHO05D006533 8.2e-100 368.2 371 59.3
CBR_g36902 Chara braunii HOM05D004608 ORTHO05D006533 1.3e-84 317.8 321 53.6
MCO11G772 Micromonas commoda HOM05D004608 ORTHO05D006533 2.6e-82 310.1 426 43.4
CDE05G0237 Ceratophyllum demersum HOM05D004608 ORTHO05D006533 6.7e-78 295.4 261 62.5
PRCOL_00000426 Prasinoderma coloniale HOM05D004608 ORTHO05D006533 8.2e-76 288.5 428 41.1
Pp3c17_4800 Physcomitrium patens HOM05D004608 ORTHO05D006533 2.0e-66 257.3 472 38.1
Cre10.g447300 Chlamydomonas reinhardtii HOM05D004608 ORTHO05D006533 1.4e-62 244.6 362 39.8
Aa31LG10G450 Aethionema arabicum HOM05D004608 ORTHO05D006533 8.3e-60 235.3 335 43.0
CDE05G1663 Ceratophyllum demersum HOM05D004608 ORTHO05D006533 2.0e-58 230.7 126 86.5
QL09p009005 Quercus lobata HOM05D000176 ORTHO05D000106 3.0e-54 216.9 134 81.3
Aa31LG10G470 Aethionema arabicum HOM05D004608 ORTHO05D006533 2.0e-53 214.2 325 40.3
unitig_699.g19599 Utricularia gibba HOM05D004608 ORTHO05D006533 1.8e-46 191.0 352 36.1
CSS0026438 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 2.3e-46 190.7 116 81.9
Cfa022177 Carpinus fangiana HOM05D004608 ORTHO05D006533 3.1e-46 190.3 350 36.6
CSS0036658 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 4.0e-46 189.9 115 82.6
AL5G25300 Arabidopsis lyrata HOM05D004608 ORTHO05D038587 7.8e-42 175.6 109 80.7
Ah.06g180950 Amaranthus hybridus HOM05D004608 ORTHO05D006533 1.4e-38 164.9 139 64.0
QL05p082689 Quercus lobata HOM05D004608 ORTHO05D006533 2.3e-33 147.5 98 77.6
AUR62020809 Chenopodium quinoa HOM05D004608 ORTHO05D006533 2.1e-31 141.0 145 58.6
AL3G34310 Arabidopsis lyrata HOM05D004608 ORTHO05D038587 1.2e-26 125.2 129 55.8
CSS0047513 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 4.7e-23 113.2 58 86.2
MD12G1084200 Malus domestica HOM05D004608 ORTHO05D249232 4.7e-23 113.2 57 94.7
VMungo0954G0002 Vigna mungo HOM05D004608 ORTHO05D432787 2.7e-18 97.4 132 47.7
AUR62025404 Chenopodium quinoa HOM05D000200 ORTHO05D000262 3.5e-18 97.1 103 54.4
A05p36340 Brassica napus HOM05D004608 ORTHO05D006533 2.5e-16 90.9 65 70.8
unitig_899.g15265 Utricularia gibba HOM05D004608 ORTHO05D018951 5.6e-16 89.7 96 50.0
CDE05G3009 Ceratophyllum demersum HOM05D004608 ORTHO05D006533 1.6e-15 88.2 79 62.0
Ca_07476_v3 Cicer arietinum L. HOM05D004608 ORTHO05D018951 1.5e-13 81.6 60 71.7
CBR_g31527 Chara braunii HOM05D004608 ORTHO05D006533 1.3e-09 68.6 110 37.3
Glyma.10G116100 Glycine max HOM05D004608 ORTHO05D021061 1.8e-09 68.2 50 64.0
QL09p040375 Quercus lobata HOM05D000176 ORTHO05D000106 8.7e-09 65.9 42 76.2
MD05G1213200 Malus domestica HOM05D004608 ORTHO05D006533 7.4e-08 62.8 64 59.4
CDE05G1534 Ceratophyllum demersum HOM05D004608 ORTHO05D018951 9.6e-08 62.4 52 59.6
MD05G1213500 Malus domestica HOM05D004608 ORTHO05D246297 2.1e-07 61.2 62 59.7
TAR629G0124 Trochodendron aralioides HOM05D002759 ORTHO05D021026 4.8e-07 60.1 42 66.7
arahy.Tifrunner.gnm1.ann1.C1KQ7I Arachis hypogaea HOM05D004608 ORTHO05D006012 6.2e-07 59.7 71 50.7
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 1.8e-06 58.2 43 67.4
HanXRQChr05g0144601 Helianthus annuus HOM05D004608 ORTHO05D018951 4.0e-06 57.0 44 63.6
HanXRQChr08g0229721 Helianthus annuus HOM05D004608 ORTHO05D018951 4.0e-06 57.0 44 63.6
HanXRQChr12g0367991 Helianthus annuus HOM05D004608 ORTHO05D018951 4.0e-06 57.0 44 63.6
CDE05G2773 Ceratophyllum demersum HOM05D004608 ORTHO05D018951 6.9e-06 56.2 58 58.6


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