Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 1.4e-142 509.6 256 100.0
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 6.1e-130 467.6 256 94.1
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.5e-117 426.4 297 77.1
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.3e-116 423.3 272 82.0
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 2.6e-112 409.1 272 78.7
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.1e-94 350.5 211 78.2
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 1.7e-92 343.2 206 79.6
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 3.8e-92 342.0 229 72.9
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 3.8e-92 342.0 207 79.7
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 4.0e-89 332.0 229 69.9
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 4.9e-87 325.1 211 73.0
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.7e-85 319.3 208 72.6
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 2.9e-84 315.8 227 67.0
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 5.0e-84 315.1 212 70.3
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 8.6e-84 314.3 209 71.8
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 8.6e-84 314.3 233 75.1
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.1e-83 313.9 245 65.3
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 4.3e-83 312.0 277 57.8
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 2.8e-82 309.3 212 69.8
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 2.8e-82 309.3 208 72.1
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 4.7e-82 308.5 207 72.5
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 4.7e-82 308.5 207 72.5
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.0e-81 305.8 203 71.4
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 4.0e-81 305.4 208 69.7
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 4.0e-81 305.4 211 67.8
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 4.0e-81 305.4 212 68.9
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 5.2e-81 305.1 261 59.4
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 6.8e-81 304.7 227 67.0
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 6.8e-81 304.7 208 69.7
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 6.8e-81 304.7 212 67.9
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 8.9e-81 304.3 212 68.4
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 1.2e-80 303.9 262 59.9
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 1.2e-80 303.9 208 66.3
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 4.4e-80 302.0 208 66.8
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 5.8e-80 301.6 211 67.8
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 5.8e-80 301.6 207 67.6
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 9.8e-80 300.8 212 66.0
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 2.2e-79 299.7 242 60.3
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 2.2e-79 299.7 246 60.6
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.9e-79 299.3 205 69.8
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 2.9e-79 299.3 207 72.0
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 2.9e-79 299.3 211 68.2
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 6.4e-79 298.1 259 59.5
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.4e-78 297.0 222 64.9
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 1.9e-78 296.6 266 57.5
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 2.4e-78 296.2 207 71.5
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 3.2e-78 295.8 210 65.7
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 3.2e-78 295.8 211 64.5
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 4.1e-78 295.4 229 62.4
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 5.4e-78 295.0 195 72.8
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.2e-77 293.9 243 60.5
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 1.2e-77 293.9 209 66.0
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 1.6e-77 293.5 214 67.3
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 4.6e-77 292.0 202 67.8
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 1.7e-76 290.0 216 62.5
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 1.7e-76 290.0 209 65.6
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 3.0e-76 289.3 182 76.4
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 5.0e-76 288.5 247 58.7
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 5.0e-76 288.5 212 65.1
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 6.6e-76 288.1 212 64.2
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 8.6e-76 287.7 245 57.6
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.5e-75 287.0 224 62.5
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 1.5e-75 287.0 254 59.1
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 3.3e-75 285.8 252 57.9
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 8.0e-74 281.2 232 59.5
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 3.1e-73 279.3 208 67.8
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 1.2e-72 277.3 206 63.1
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 2.0e-72 276.6 207 61.8
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 7.5e-72 274.6 205 62.9
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 3.7e-71 272.3 208 61.5
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 8.1e-66 254.6 216 60.6
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 8.1e-66 254.6 210 60.0
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.4e-65 253.8 237 54.4
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 5.2e-65 251.9 182 63.7
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 2.0e-64 250.0 181 66.3
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 2.6e-64 249.6 217 56.2
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.1e-62 244.2 166 71.7
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 1.6e-61 240.4 193 62.7
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 2.3e-60 236.5 210 60.0
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 8.1e-58 228.0 188 63.3
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 1.4e-57 227.3 170 63.5
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 5.2e-57 225.3 234 48.7
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 1.2e-53 214.2 232 46.1
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 5.1e-52 208.8 249 47.4
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 1.1e-51 207.6 274 43.1
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.8e-50 203.0 141 68.8
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 9.0e-49 198.0 199 48.2
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 2.0e-48 196.8 229 42.8
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 2.1e-45 186.8 185 49.2
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 1.0e-44 184.5 141 62.4
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 5.6e-35 152.1 110 60.9
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.4e-33 146.7 155 51.6
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 5.5e-30 135.6 105 60.0
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 4.6e-29 132.5 146 47.9
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.0e-28 131.3 100 65.0
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 8.7e-28 128.3 204 36.3
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 8.2e-26 121.7 166 39.2
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 5.8e-24 115.5 208 39.9
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 6.5e-23 112.1 77 64.9
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.0e-20 104.8 102 52.9
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 1.3e-20 104.4 78 61.5
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 2.7e-13 80.1 191 28.3
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 1.7e-10 70.9 41 75.6
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 2.2e-10 70.5 78 42.3
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 1.8e-09 67.4 41 63.4
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 3.1e-09 66.6 54 55.6


User provided reference genes

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