Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.013G136900 Gossypium raimondii HOM05D008742 ORTHO05D010377 4.2e-153 544.7 275 100.0
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 3.1e-148 528.5 275 97.8
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 2.0e-142 509.2 279 93.9
Thecc.08G171700 Theobroma cacao HOM05D008742 ORTHO05D010377 4.7e-96 355.1 276 67.4
QL10p026828 Quercus lobata HOM05D008742 ORTHO05D010377 3.0e-58 229.6 289 48.1
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 1.3e-56 224.2 292 47.9
TAR628G0950 Trochodendron aralioides HOM05D008742 ORTHO05D010377 1.9e-52 210.3 290 46.2
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 1.2e-51 207.6 294 45.9
CiPaw.03G017300 Carya illinoinensis HOM05D008742 ORTHO05D010377 6.7e-50 201.8 293 43.7
Aqoxy6G00073 Aquilegia oxysepala HOM05D008742 ORTHO05D010377 8.7e-50 201.4 248 46.4
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 1.5e-49 200.7 279 44.4
CANSAT25G0509 Cannabis sativa HOM05D008742 ORTHO05D010377 4.0e-47 192.6 281 43.8
Sabra13G0088400 Salix brachista HOM05D008742 ORTHO05D010377 4.0e-47 192.6 347 40.3
Ciclev10021221m.g Citrus clementina HOM05D008742 ORTHO05D010377 5.3e-47 192.2 331 41.1
Eucgr.F02959 Eucalyptus grandis HOM05D008742 ORTHO05D010377 2.7e-43 179.9 289 41.5
MBI03_g14517_MAGBIO Magnolia biondii HOM05D008742 ORTHO05D010377 2.7e-43 179.9 283 42.0
MSTRG.25490 Avicennia marina HOM05D008742 ORTHO05D010377 1.9e-41 173.7 276 42.0
Nitab4.5_0001278g0110 Nicotiana tabacum HOM05D008742 ORTHO05D010377 1.4e-39 167.5 279 40.5
Nitab4.5_0001359g0010 Nicotiana tabacum HOM05D008742 ORTHO05D010377 6.9e-39 165.2 280 41.1
Solyc11g031970.2 Solanum lycopersicum HOM05D008742 ORTHO05D010377 6.9e-39 165.2 237 41.8
PGR042G1068 Punica granatum HOM05D008742 ORTHO05D010377 1.2e-38 164.5 224 47.8
GSVIVG01025912001 Vitis vinifera HOM05D008742 ORTHO05D010377 2.6e-38 163.3 228 46.5
Sopen11g014500 Solanum pennellii HOM05D008742 ORTHO05D010377 5.9e-38 162.2 238 41.6
PGSC0003DMG400031182 Solanum tuberosum HOM05D008742 ORTHO05D010377 5.9e-38 162.2 280 40.0
PSO170G1705 Papaver somniferum HOM05D008742 ORTHO05D010377 3.2e-36 156.4 298 38.3
PSO782G1932 Papaver somniferum HOM05D008742 ORTHO05D010377 5.5e-36 155.6 249 41.8
Peaxi162Scf00688g00019 Petunia axillaris HOM05D008742 ORTHO05D010377 9.3e-36 154.8 275 37.1
ATR1136G217 Amborella trichopoda HOM05D008742 ORTHO05D010377 1.0e-34 151.4 218 41.3
Migut.C01345 Erythranthe guttata HOM05D008742 ORTHO05D010377 8.2e-32 141.7 252 39.3
Duzib177G0721 Durio zibethinus HOM05D008742 ORTHO05D010377 5.3e-31 139.0 90 73.3
Cc10_g16420 Coffea canephora HOM05D008742 ORTHO05D010377 2.0e-30 137.1 196 43.9
SalBow7G3290 Salvia bowleyana HOM05D008742 ORTHO05D010377 1.3e-29 134.4 283 36.4
ClCG08G000630 Citrullus lanatus HOM05D008742 ORTHO05D010377 1.1e-28 131.3 254 37.0
MELO3C022199.2 Cucumis melo HOM05D008742 ORTHO05D010377 2.7e-27 126.7 282 33.7
CsaV3_5G040230 Cucumis sativus L. HOM05D008742 ORTHO05D010377 4.6e-27 125.9 283 33.6
Cpa.g.sc21.53 Carica papaya HOM05D008742 ORTHO05D010377 5.1e-26 122.5 236 39.4
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 1.7e-24 117.5 135 49.6
Haze_13917 Corylus avellana HOM05D008742 ORTHO05D010377 2.4e-23 113.6 107 56.1
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 6.5e-21 105.5 271 32.5
CDE07G1611 Ceratophyllum demersum HOM05D008742 ORTHO05D010377 2.0e-17 94.0 248 33.9
Duzib177G0864 Durio zibethinus HOM05D008742 ORTHO05D010377 2.8e-16 90.1 85 58.8
Dinv41793 Davidia involucrata HOM05D008742 ORTHO05D010377 3.7e-16 89.7 107 49.5
Aa31LG9G12020 Aethionema arabicum HOM05D012304 ORTHO05D010377 4.1e-15 86.3 235 31.5
AL6G43670 Arabidopsis lyrata HOM05D012304 ORTHO05D010377 2.1e-11 73.9 236 29.2
SMO236G0128 Selaginella moellendorffii HOM05D008742 ORTHO05D010377 2.1e-11 73.9 234 29.5
Sed0018339 Sechium edule HOM05D008742 ORTHO05D010377 6.1e-11 72.4 126 40.5
Thhalv10028904m.g Eutrema salsugineum HOM05D012304 ORTHO05D010377 2.3e-10 70.5 223 26.5
Carub.0006s2851 Capsella rubella HOM05D012304 ORTHO05D010377 6.7e-10 68.9 244 31.6
Mapoly0060s0075 Marchantia polymorpha HOM05D020309 ORTHO05D010377 3.3e-09 66.6 287 25.8
Sp6g07500 Schrenkiella parvula HOM05D012304 ORTHO05D010377 1.3e-08 64.7 240 25.4
AT4G09970 Arabidopsis thaliana HOM05D012304 ORTHO05D010377 4.8e-08 62.8 222 30.2
SGA_v2.0_scaffold24G10618 Striga asiatica HOM05D000065 ORTHO05D000162 2.7e-06 57.0 109 33.9
CARHR260950 Cardamine hirsuta HOM05D012304 ORTHO05D010377 7.7e-06 55.5 116 36.2


User provided reference genes

Program Settings