Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.013G110600 Gossypium raimondii HOM05D004398 ORTHO05D005268 5.6e-46 187.2 90 100.0
Gohir.D03G064300 Gossypium hirsutum HOM05D004398 ORTHO05D005268 2.7e-40 168.3 81 98.8
Duzib150G1379 Durio zibethinus HOM05D004398 ORTHO05D005268 6.2e-37 157.1 80 92.5
Thecc.09G147500 Theobroma cacao HOM05D004398 ORTHO05D005268 1.1e-36 156.4 80 91.2
COL.COLO4_24002 Corchorus olitorius HOM05D004398 ORTHO05D005268 1.8e-36 155.6 80 91.2
MELO3C011228.2 Cucumis melo HOM05D004398 ORTHO05D005268 1.2e-35 152.9 80 90.0
Gohir.D08G102900 Gossypium hirsutum HOM05D004398 ORTHO05D005268 1.2e-35 152.9 77 93.5
Gorai.004G110900 Gossypium raimondii HOM05D004398 ORTHO05D005268 1.2e-35 152.9 77 93.5
Ciclev10009736m.g Citrus clementina HOM05D004398 ORTHO05D005268 2.6e-35 151.8 80 86.2
Eucgr.C01806 Eucalyptus grandis HOM05D004398 ORTHO05D005268 3.4e-35 151.4 80 86.2
ClCG08G013040 Citrullus lanatus HOM05D004398 ORTHO05D005268 4.4e-35 151.0 79 89.9
Duzib187G0288 Durio zibethinus HOM05D004398 ORTHO05D005268 4.4e-35 151.0 80 88.8
Gohir.A08G090062 Gossypium hirsutum HOM05D004398 ORTHO05D005268 4.4e-35 151.0 77 92.2
Manes.16G118300 Manihot esculenta HOM05D004398 ORTHO05D005268 4.4e-35 151.0 80 87.5
Cfa013194 Carpinus fangiana HOM05D004398 ORTHO05D005268 5.8e-35 150.6 80 86.2
Manes.03G018300 Manihot esculenta HOM05D004398 ORTHO05D005268 7.5e-35 150.2 80 87.5
Nn2g11907 Nelumbo nucifera HOM05D004398 ORTHO05D005268 7.5e-35 150.2 80 85.0
TWI63G1039 Tripterygium wilfordii HOM05D004398 ORTHO05D005268 9.8e-35 149.8 80 85.0
Cpa.g.sc91.31 Carica papaya HOM05D004398 ORTHO05D005268 1.3e-34 149.4 80 85.0
QL12p031735 Quercus lobata HOM05D004398 ORTHO05D005268 1.3e-34 149.4 84 83.3
Glyma.14G003300 Glycine max HOM05D004398 ORTHO05D005268 1.7e-34 149.1 85 80.0
Glyma.02G309600 Glycine max HOM05D004398 ORTHO05D005268 2.2e-34 148.7 77 88.3
Lj1g0014596 Lotus japonicus HOM05D004398 ORTHO05D005268 2.2e-34 148.7 78 85.9
MD08G1142000 Malus domestica HOM05D004398 ORTHO05D005268 3.7e-34 147.9 80 86.2
Potri.018G032400 Populus trichocarpa HOM05D004398 ORTHO05D005268 3.7e-34 147.9 80 85.0
GSVIVG01035773001 Vitis vinifera HOM05D004398 ORTHO05D005268 4.9e-34 147.5 80 83.8
CSS0033658 Camellia sinensis var. sinensis HOM05D004398 ORTHO05D005268 6.4e-34 147.1 79 86.1
Nitab4.5_0000508g0250 Nicotiana tabacum HOM05D004398 ORTHO05D005268 6.4e-34 147.1 80 82.5
Oeu032496.1 Olea europaea HOM05D004398 ORTHO05D005268 8.3e-34 146.7 80 85.0
Hund03009 Selenicereus undatus HOM05D004398 ORTHO05D005268 8.3e-34 146.7 85 78.8
TWI34G0493 Tripterygium wilfordii HOM05D004398 ORTHO05D005268 8.3e-34 146.7 80 85.0
Lalb_Chr17g0349351 Lupinus albus HOM05D004398 ORTHO05D005268 1.1e-33 146.4 77 85.7
MD15G1118400 Malus domestica HOM05D004398 ORTHO05D005268 1.1e-33 146.4 84 82.1
Rhsim07G0150800 Rhododendron simsii HOM05D004398 ORTHO05D005268 1.1e-33 146.4 79 86.1
TAR625G0264 Trochodendron aralioides HOM05D004398 ORTHO05D005268 1.1e-33 146.4 80 83.8
Phvul.008G289800 Phaseolus vulgaris HOM05D004398 ORTHO05D005268 1.4e-33 146.0 77 85.7
SalBow8G2141 Salvia bowleyana HOM05D004398 ORTHO05D005268 1.4e-33 146.0 80 82.5
SalBow8G2197 Salvia bowleyana HOM05D004398 ORTHO05D005268 1.4e-33 146.0 80 82.5
Hund25700 Selenicereus undatus HOM05D004398 ORTHO05D005268 1.4e-33 146.0 79 86.1
TPR.G35885 Trifolium pratense HOM05D004398 ORTHO05D005268 1.4e-33 146.0 79 86.1
VMungo0647G1556 Vigna mungo HOM05D004398 ORTHO05D005268 1.4e-33 146.0 77 85.7
Actinidia20317 Actinidia chinensis HOM05D004398 ORTHO05D005268 1.9e-33 145.6 79 84.8
MSTRG.13991 Avicennia marina HOM05D004398 ORTHO05D005268 1.9e-33 145.6 79 83.5
Sed0003647 Sechium edule HOM05D004398 ORTHO05D005268 2.4e-33 145.2 80 86.2
Ca_06490_v3 Cicer arietinum L. HOM05D004398 ORTHO05D005268 3.2e-33 144.8 79 84.8
Nn8g39345 Nelumbo nucifera HOM05D004398 ORTHO05D005268 3.2e-33 144.8 80 82.5
Medtr5g098790 Medicago truncatula HOM05D004398 ORTHO05D005268 4.1e-33 144.4 80 82.5
Potri.006G248900 Populus trichocarpa HOM05D004398 ORTHO05D005268 4.1e-33 144.4 80 81.2
CiPaw.07G219500 Carya illinoinensis HOM05D004398 ORTHO05D005268 5.4e-33 144.1 80 82.5
TAR636G1605 Trochodendron aralioides HOM05D002580 ORTHO05D005268 5.4e-33 144.1 80 83.8
CAN.G199.38 Capsicum annuum HOM05D004398 ORTHO05D005268 7.0e-33 143.7 86 76.7
Prupe.1G471800 Prunus persica HOM05D004398 ORTHO05D005268 7.0e-33 143.7 80 85.0
vmacro05207 Vaccinium macrocarpon HOM05D004398 ORTHO05D005268 7.0e-33 143.7 79 84.8
HanXRQChr13g0402451 Helianthus annuus HOM05D004398 ORTHO05D005268 9.2e-33 143.3 79 84.8
Sabra06G0194700 Salix brachista HOM05D004398 ORTHO05D005268 9.2e-33 143.3 80 82.5
SGA_v2.0_scaffold169G38624 Striga asiatica HOM05D004398 ORTHO05D005268 1.2e-32 142.9 80 80.0
HPP92_024601 Vanilla planifolia HOM05D004398 ORTHO05D005268 1.2e-32 142.9 79 84.8
Lsat_1_v5_gn_6_21660 Lactuca sativa HOM05D004398 ORTHO05D005268 1.6e-32 142.5 79 84.8
Nitab4.5_0002339g0050 Nicotiana tabacum HOM05D004398 ORTHO05D005268 1.6e-32 142.5 80 80.0
PGSC0003DMG400007371 Solanum tuberosum HOM05D004398 ORTHO05D005268 1.6e-32 142.5 80 82.5
PSO170G5542 Papaver somniferum HOM05D004398 ORTHO05D005268 2.1e-32 142.1 80 80.0
Psat2g001840 Pisum sativum HOM05D004398 ORTHO05D005268 2.1e-32 142.1 80 81.2
Lj7A716G42 Lonicera japonica HOM05D004398 ORTHO05D005268 2.7e-32 141.7 80 82.5
PSO017G1065 Papaver somniferum HOM05D004398 ORTHO05D005268 2.7e-32 141.7 80 78.8
RcHm_v2.0_Chr6g0298801 Rosa chinensis HOM05D004398 ORTHO05D005268 2.7e-32 141.7 80 81.2
Solyc06g065570.3 Solanum lycopersicum HOM05D004398 ORTHO05D005268 2.7e-32 141.7 86 75.6
Sopen06g024110 Solanum pennellii HOM05D004398 ORTHO05D005268 2.7e-32 141.7 86 75.6
CANSAT54G1009 Cannabis sativa HOM05D004398 ORTHO05D005268 3.5e-32 141.4 87 75.9
CANSAT54G1633 Cannabis sativa HOM05D004398 ORTHO05D005268 3.5e-32 141.4 87 75.9
CANSAT54G2276 Cannabis sativa HOM05D004398 ORTHO05D005268 3.5e-32 141.4 87 75.9
Solyc08g067440.2 Solanum lycopersicum HOM05D004398 ORTHO05D005268 3.5e-32 141.4 80 81.2
Sopen08g021370 Solanum pennellii HOM05D004398 ORTHO05D005268 3.5e-32 141.4 80 81.2
vmacro05203 Vaccinium macrocarpon HOM05D004398 ORTHO05D005268 3.5e-32 141.4 79 83.5
Aqoxy7G01991 Aquilegia oxysepala HOM05D004398 ORTHO05D005268 4.6e-32 141.0 79 83.5
MSTRG.25860 Avicennia marina HOM05D004398 ORTHO05D005268 4.6e-32 141.0 79 83.5
CDE01G0001 Ceratophyllum demersum HOM05D004398 ORTHO05D005268 4.6e-32 141.0 79 81.0
Cc11_g01650 Coffea canephora HOM05D004398 ORTHO05D005268 4.6e-32 141.0 80 80.0
ECA233G2050 Erigeron canadensis HOM05D004398 ORTHO05D005268 4.6e-32 141.0 79 83.5
Migut.E01484 Erythranthe guttata HOM05D004398 ORTHO05D005268 4.6e-32 141.0 79 81.0
Sed0007380 Sechium edule HOM05D004398 ORTHO05D005268 4.6e-32 141.0 77 85.7
PGSC0003DMG400008977 Solanum tuberosum HOM05D004398 ORTHO05D005268 4.6e-32 141.0 86 75.6
PGSC0003DMG400026128 Solanum tuberosum HOM05D004398 ORTHO05D005268 4.6e-32 141.0 86 75.6
Peaxi162Scf01343g00154 Petunia axillaris HOM05D004398 ORTHO05D005268 6.0e-32 140.6 80 78.8
HanXRQChr02g0050691 Helianthus annuus HOM05D004398 ORTHO05D005268 1.0e-31 139.8 79 82.3
HanXRQChr02g0050741 Helianthus annuus HOM05D004398 ORTHO05D005268 1.0e-31 139.8 79 82.3
Peaxi162Scf00251g01121 Petunia axillaris HOM05D004398 ORTHO05D005268 1.0e-31 139.8 79 78.5
PGR031G0419 Punica granatum HOM05D004398 ORTHO05D005268 1.0e-31 139.8 77 83.1
CAN.G211.13 Capsicum annuum HOM05D004398 ORTHO05D005268 1.3e-31 139.4 80 78.8
CDE02G1057 Ceratophyllum demersum HOM05D004398 ORTHO05D005268 1.3e-31 139.4 79 81.0
FAN15G0393 Fragaria x ananassa HOM05D004398 ORTHO05D005268 1.7e-31 139.0 80 81.2
FAN24G0064 Fragaria x ananassa HOM05D004398 ORTHO05D005268 1.7e-31 139.0 80 81.2
FAN27G0432 Fragaria x ananassa HOM05D004398 ORTHO05D005268 1.7e-31 139.0 80 81.2
Sc09g0008690 Simmondsia chinensis HOM05D004398 ORTHO05D005268 1.7e-31 139.0 79 82.3
HanXRQChr02g0050671 Helianthus annuus HOM05D004398 ORTHO05D005268 2.3e-31 138.7 79 81.0
arahy.Tifrunner.gnm1.ann1.P67EX8 Arachis hypogaea HOM05D004398 ORTHO05D005268 3.0e-31 138.3 91 73.6
EL10Ac2g02565 Beta vulgaris HOM05D004398 ORTHO05D005268 3.9e-31 137.9 77 80.5
Os01g0610400 Oryza sativa ssp. japonica HOM05D004398 ORTHO05D005268 5.1e-31 137.5 79 81.0
THA.LOC104815033 Tarenaya hassleriana HOM05D004398 ORTHO05D005268 5.1e-31 137.5 77 79.2
Zm00001eb161820 Zea mays HOM05D004398 ORTHO05D005268 5.1e-31 137.5 79 82.3
Actinidia13266 Actinidia chinensis HOM05D004398 ORTHO05D005268 6.6e-31 137.1 86 73.3
Lj8A616G45 Lonicera japonica HOM05D004398 ORTHO05D005268 8.6e-31 136.7 79 79.7
BcaB08g37069 Brassica carinata HOM05D004398 ORTHO05D005268 1.5e-30 136.0 77 77.9
ATR0618G325 Amborella trichopoda HOM05D004398 ORTHO05D005268 1.9e-30 135.6 80 80.0
BcaC04g19238 Brassica carinata HOM05D004398 ORTHO05D005268 2.5e-30 135.2 77 77.9
C09p65530 Brassica napus HOM05D004398 ORTHO05D005268 2.5e-30 135.2 77 77.9
BolC9t59376H Brassica oleracea HOM05D004398 ORTHO05D005268 2.5e-30 135.2 77 77.9
Gohir.A04G025100 Gossypium hirsutum HOM05D004398 ORTHO05D005268 3.3e-30 134.8 70 91.4
Thhalv10014874m.g Eutrema salsugineum HOM05D004398 ORTHO05D005268 4.3e-30 134.4 77 77.9
Gohir.A04G025400 Gossypium hirsutum HOM05D004398 ORTHO05D005268 4.3e-30 134.4 70 91.4
Carub.0006s0980 Capsella rubella HOM05D004398 ORTHO05D005268 5.6e-30 134.0 77 77.9
Nitab4.5_0002000g0050 Nicotiana tabacum HOM05D004398 ORTHO05D005268 5.6e-30 134.0 80 76.2
Nitab4.5_0007227g0020 Nicotiana tabacum HOM05D004398 ORTHO05D005268 5.6e-30 134.0 80 76.2
C02p04990 Brassica napus HOM05D004398 ORTHO05D005268 1.2e-29 132.9 77 75.3
BolC2t06455H Brassica oleracea HOM05D004398 ORTHO05D005268 1.2e-29 132.9 77 75.3
A02p00960 Brassica napus HOM05D004398 ORTHO05D005268 1.6e-29 132.5 77 75.3
AT5G11340 Arabidopsis thaliana HOM05D004398 ORTHO05D005268 2.1e-29 132.1 77 76.6
A10p26390 Brassica napus HOM05D004398 ORTHO05D005268 2.1e-29 132.1 77 75.3
BraA10t44696Z Brassica rapa HOM05D004398 ORTHO05D005268 2.1e-29 132.1 77 75.3
Aa31LG3G15850 Aethionema arabicum HOM05D004398 ORTHO05D005268 2.8e-29 131.7 77 76.6
SEGI_22963 Sequoiadendron giganteum HOM05D004398 ORTHO05D005268 2.8e-29 131.7 91 69.2
unitig_747.g21389 Utricularia gibba HOM05D001746 ORTHO05D001823 2.8e-29 131.7 73 82.2
AL6G21990 Arabidopsis lyrata HOM05D004398 ORTHO05D005268 3.6e-29 131.3 77 75.3
BraA02t05080Z Brassica rapa HOM05D004398 ORTHO05D005268 4.7e-29 131.0 77 75.3
Sp6g32240 Schrenkiella parvula HOM05D004398 ORTHO05D005268 6.2e-29 130.6 77 75.3
BcaNung01922 Brassica carinata HOM05D004398 ORTHO05D005268 8.1e-29 130.2 77 75.3
SHI54407 Sapria himalayana HOM05D004398 ORTHO05D005268 6.8e-28 127.1 85 68.2
AUR62032353 Chenopodium quinoa HOM05D004398 ORTHO05D005268 8.9e-28 126.7 80 73.8
AUR62041848 Chenopodium quinoa HOM05D004398 ORTHO05D005268 8.9e-28 126.7 80 73.8
C02p05180 Brassica napus HOM05D004398 ORTHO05D005268 1.2e-27 126.3 78 74.4
SHI54562 Sapria himalayana HOM05D004398 ORTHO05D005268 1.2e-27 126.3 85 67.1
Haze_21593 Corylus avellana HOM05D004398 ORTHO05D005268 3.2e-25 118.2 80 71.2
Pp3c13_8050 Physcomitrium patens HOM05D004398 ORTHO05D005268 2.1e-24 115.5 91 60.4
THA.LOC104799227 Tarenaya hassleriana HOM05D004398 ORTHO05D005268 2.7e-24 115.2 77 67.5
Lalb_Chr04g0247061 Lupinus albus HOM05D004398 ORTHO05D005268 4.6e-24 114.4 61 82.0
Haze_21596 Corylus avellana HOM05D004398 ORTHO05D005268 6.0e-24 114.0 60 83.3
C02p05140 Brassica napus HOM05D004398 ORTHO05D005268 1.0e-23 113.2 107 54.2
FvH4_2g29780 Fragaria vesca HOM05D004398 ORTHO05D005268 1.0e-23 113.2 67 77.6
CBR_g51562 Chara braunii HOM05D004398 ORTHO05D005268 3.0e-23 111.7 90 61.1
AagrBONN_evm.TU.Sc2ySwM_228.5405 Anthoceros agrestis HOM05D004398 ORTHO05D005268 6.6e-23 110.5 78 66.7
Mapoly0023s0029 Marchantia polymorpha HOM05D004398 ORTHO05D005268 1.9e-22 109.0 83 65.1
CARHR201910 Cardamine hirsuta HOM05D004398 ORTHO05D005268 3.3e-22 108.2 63 74.6
BcaC03g13363 Brassica carinata HOM05D004398 ORTHO05D005268 2.6e-19 98.6 58 75.9
SMO356G0009 Selaginella moellendorffii HOM05D004398 ORTHO05D005268 4.4e-19 97.8 78 56.4
Dinv30193 Davidia involucrata HOM05D004398 ORTHO05D004293 7.6e-19 97.1 53 84.9
PRCOL_00002723 Prasinoderma coloniale HOM05D004398 ORTHO05D005268 1.3e-18 96.3 81 50.6
Haze_26917 Corylus avellana HOM05D004398 ORTHO05D005268 1.3e-15 86.3 90 50.0
Cre02.g101850 Chlamydomonas reinhardtii HOM05D004398 ORTHO05D005268 7.3e-14 80.5 77 49.4
MCO16G331 Micromonas commoda HOM05D004398 ORTHO05D005268 5.3e-12 74.3 76 50.0
CAN.G165.5 Capsicum annuum HOM05D004398 ORTHO05D005268 2.2e-10 68.9 38 81.6
Nn1g00175 Nelumbo nucifera HOM05D004822 ORTHO05D005632 5.1e-07 57.8 65 44.6
SMO114G0115 Selaginella moellendorffii HOM05D004398 ORTHO05D005268 1.1e-06 56.6 38 76.3
PGR142G2504 Punica granatum HOM05D004822 ORTHO05D005632 1.9e-06 55.8 76 44.7
AagrBONN_evm.TU.Sc2ySwM_344.467 Anthoceros agrestis HOM05D004398 ORTHO05D005268 3.3e-06 55.1 71 40.8
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 3.3e-06 55.1 62 40.3
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 7.3e-06 53.9 63 42.9
SEGI_16512 Sequoiadendron giganteum HOM05D004822 ORTHO05D005632 9.6e-06 53.5 65 41.5
TAR362G0773 Trochodendron aralioides HOM05D004822 ORTHO05D005632 9.6e-06 53.5 65 41.5


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