Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.013G100100 Gossypium raimondii HOM05D002846 ORTHO05D002692 1.9e-30 136.3 68 100.0
Gohir.D13G087600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 2.5e-30 136.0 67 100.0
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 2.7e-21 105.9 67 76.1
Thecc.02G312900 Theobroma cacao HOM05D002846 ORTHO05D002692 3.1e-17 92.4 68 73.5
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 6.1e-13 78.2 63 68.3
Gohir.D12G159433 Gossypium hirsutum HOM05D002846 ORTHO05D002692 6.1e-13 78.2 63 68.3
Gorai.008G172600 Gossypium raimondii HOM05D002846 ORTHO05D002692 6.1e-13 78.2 63 68.3
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 1.4e-12 77.0 68 55.9
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 3.3e-11 72.4 63 57.1
Ca_26241_v3 Cicer arietinum L. HOM05D002846 ORTHO05D002692 5.7e-11 71.6 68 55.9
Atru.chr6.3164 Acer truncatum HOM05D002846 ORTHO05D002692 7.5e-11 71.2 69 58.0
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 7.5e-11 71.2 65 58.5
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 9.7e-11 70.9 68 58.8
Glyma.12G100400 Glycine max HOM05D002846 ORTHO05D002692 1.3e-10 70.5 67 55.2
COL.COLO4_27687 Corchorus olitorius HOM05D002846 ORTHO05D002692 2.2e-10 69.7 73 61.6
Glyma.06G303502 Glycine max HOM05D002846 ORTHO05D002692 2.8e-10 69.3 67 53.7
Haze_12882 Corylus avellana HOM05D002846 ORTHO05D002692 4.8e-10 68.6 65 58.5
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 4.8e-10 68.6 63 54.0
CiPaw.03G161600 Carya illinoinensis HOM05D002846 ORTHO05D002692 6.3e-10 68.2 67 55.2
Phvul.011G105200 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 8.2e-10 67.8 66 53.0
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 4.1e-09 65.5 68 48.5
Lj3g0002811 Lotus japonicus HOM05D002846 ORTHO05D002692 1.2e-08 63.9 63 55.6
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.6e-08 63.5 63 50.8
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 3.5e-08 62.4 59 57.6
Medtr4g046870 Medicago truncatula HOM05D002846 ORTHO05D002692 5.9e-08 61.6 54 57.4
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 7.7e-08 61.2 69 53.6
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 7.7e-08 61.2 65 52.3
BcaC01g03489 Brassica carinata HOM05D002846 ORTHO05D002692 1.0e-07 60.8 53 56.6
A03p42420 Brassica napus HOM05D002846 ORTHO05D002692 1.0e-07 60.8 53 56.6
C03p51900 Brassica napus HOM05D002846 ORTHO05D002692 1.0e-07 60.8 53 56.6
BolC3t17475H Brassica oleracea HOM05D002846 ORTHO05D002692 1.0e-07 60.8 53 56.6
BraA03t13394Z Brassica rapa HOM05D002846 ORTHO05D002692 1.0e-07 60.8 53 56.6
Thhalv10021505m.g Eutrema salsugineum HOM05D002846 ORTHO05D002692 1.0e-07 60.8 55 58.2
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 1.0e-07 60.8 63 52.4
Actinidia09707 Actinidia chinensis HOM05D002846 ORTHO05D002692 1.3e-07 60.5 59 59.3
BcaB04g20571 Brassica carinata HOM05D002846 ORTHO05D002692 1.3e-07 60.5 53 58.5
Psat7g153320 Pisum sativum HOM05D002846 ORTHO05D002692 1.7e-07 60.1 54 55.6
TWI36G0639 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.7e-07 60.1 67 55.2
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 2.2e-07 59.7 69 52.2
BcaC09g49107 Brassica carinata HOM05D002846 ORTHO05D002692 2.9e-07 59.3 59 55.9
C01p42460 Brassica napus HOM05D002846 ORTHO05D002692 2.9e-07 59.3 59 55.9
BolC1t04204H Brassica oleracea HOM05D002846 ORTHO05D002692 2.9e-07 59.3 59 55.9
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 2.9e-07 59.3 63 49.2
BcaB04g19182 Brassica carinata HOM05D002846 ORTHO05D002692 3.8e-07 58.9 53 52.8
MD09G1107000 Malus domestica HOM05D002846 ORTHO05D002692 3.8e-07 58.9 62 53.2
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 3.8e-07 58.9 65 50.8
BcaB06g26277 Brassica carinata HOM05D002846 ORTHO05D002692 5.0e-07 58.5 62 50.0
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 5.0e-07 58.5 59 54.2
Sp3g19720 Schrenkiella parvula HOM05D002846 ORTHO05D002692 5.0e-07 58.5 53 56.6
Manes.12G075700 Manihot esculenta HOM05D002846 ORTHO05D002692 6.5e-07 58.2 56 53.6
VMungo0971G0001 Vigna mungo HOM05D002846 ORTHO05D002692 1.1e-06 57.4 65 52.3
CARHR097660 Cardamine hirsuta HOM05D002846 ORTHO05D002692 1.5e-06 57.0 53 54.7
A01p33250 Brassica napus HOM05D002846 ORTHO05D002692 1.9e-06 56.6 59 54.2
BraA01t03443Z Brassica rapa HOM05D002846 ORTHO05D002692 1.9e-06 56.6 59 54.2
Prupe.3G218700 Prunus persica HOM05D002846 ORTHO05D002692 1.9e-06 56.6 60 55.0
Carub.0003s2176 Capsella rubella HOM05D002846 ORTHO05D002692 3.2e-06 55.8 53 54.7
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 3.2e-06 55.8 57 54.4
CANSAT64G1541 Cannabis sativa HOM05D002846 ORTHO05D002692 4.2e-06 55.5 69 55.1
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 4.2e-06 55.5 68 48.5
AT3G21710 Arabidopsis thaliana HOM05D002846 ORTHO05D002692 5.5e-06 55.1 53 54.7
Potri.002G230300 Populus trichocarpa HOM05D002846 ORTHO05D002692 5.5e-06 55.1 54 53.7
Hund01143 Selenicereus undatus HOM05D002846 ORTHO05D002692 5.5e-06 55.1 49 59.2
VMungo1080G0378 Vigna mungo HOM05D002846 ORTHO05D002692 9.4e-06 54.3 65 52.3


User provided reference genes

Program Settings