Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 6.0e-135 484.2 246 100.0
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 6.0e-127 457.6 246 95.5
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.3e-116 423.3 230 94.3
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 3.3e-109 398.7 230 87.8
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 2.4e-107 392.5 230 87.0
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 2.2e-105 386.0 230 85.7
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 7.9e-103 377.5 224 83.9
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 7.7e-98 360.9 230 78.7
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 7.7e-98 360.9 230 79.6
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 1.0e-97 360.5 231 79.2
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 1.3e-97 360.1 230 77.8
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 3.8e-97 358.6 230 78.3
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 5.0e-97 358.2 230 78.7
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 6.5e-97 357.8 230 78.7
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 6.5e-97 357.8 231 78.4
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 2.5e-96 355.9 227 78.9
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 5.5e-96 354.8 213 83.6
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 7.2e-96 354.4 233 77.3
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 1.2e-95 353.6 225 78.7
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 1.6e-95 353.2 225 78.2
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 1.6e-95 353.2 230 79.1
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 2.7e-95 352.4 225 78.2
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 2.7e-95 352.4 230 76.1
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 3.6e-95 352.1 249 73.1
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 4.7e-95 351.7 230 76.1
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 4.7e-95 351.7 225 80.4
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 4.7e-95 351.7 229 78.6
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 6.1e-95 351.3 225 78.7
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 6.1e-95 351.3 224 78.6
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 1.0e-94 350.5 227 77.1
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 1.4e-94 350.1 230 76.5
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 8.8e-94 347.4 220 77.7
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 1.5e-93 346.7 225 76.9
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 2.6e-93 345.9 233 75.5
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 3.3e-93 345.5 225 75.1
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 4.4e-93 345.1 221 76.9
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 4.4e-93 345.1 220 76.4
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 7.4e-93 344.4 230 76.1
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 9.7e-93 344.0 255 71.0
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 2.8e-92 342.4 220 77.3
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.7e-92 342.0 226 75.7
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 3.7e-92 342.0 230 75.2
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 4.8e-92 341.7 230 75.2
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 6.3e-92 341.3 230 75.7
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 6.3e-92 341.3 230 75.7
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 1.8e-91 339.7 230 75.2
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 5.3e-91 338.2 230 73.5
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 5.3e-91 338.2 222 77.5
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 9.1e-91 337.4 223 76.7
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 1.6e-90 336.7 230 73.9
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 2.6e-90 335.9 220 75.0
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 3.5e-90 335.5 224 75.4
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 3.5e-90 335.5 224 75.9
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 3.5e-90 335.5 224 75.0
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 5.9e-90 334.7 227 73.1
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.0e-89 334.0 224 75.0
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 1.7e-89 333.2 230 74.3
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 1.7e-89 333.2 226 73.0
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 2.2e-89 332.8 223 75.8
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.2e-89 332.8 218 76.1
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 3.8e-89 332.0 226 74.3
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 1.9e-88 329.7 226 72.1
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 2.5e-88 329.3 230 72.2
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 5.5e-88 328.2 231 71.9
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 5.5e-88 328.2 226 72.1
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 2.1e-87 326.2 234 73.5
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.7e-87 325.9 232 73.7
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 3.0e-86 322.4 227 73.1
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 1.1e-85 320.5 224 70.1
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 5.7e-85 318.2 227 73.1
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 3.7e-84 315.5 262 66.8
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 9.1e-83 310.8 222 70.7
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 5.9e-82 308.1 222 70.3
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 5.9e-82 308.1 212 76.4
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 1.0e-81 307.4 246 66.3
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 1.7e-81 306.6 228 71.9
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 2.2e-81 306.2 227 68.7
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 2.9e-81 305.8 230 67.8
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 3.8e-81 305.4 199 75.9
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 8.5e-81 304.3 230 69.6
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 1.9e-80 303.1 246 65.4
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 2.5e-80 302.8 217 71.9
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 5.5e-80 301.6 226 70.4
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 7.2e-80 301.2 230 65.7
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.2e-79 300.4 205 74.6
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 2.1e-79 299.7 206 74.8
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 3.1e-75 285.8 224 66.1
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 4.5e-74 282.0 223 64.6
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.3e-73 280.4 184 75.5
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 1.1e-72 277.3 266 57.9
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.0e-70 270.8 229 63.8
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 8.8e-70 267.7 213 65.7
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 1.5e-69 266.9 226 61.1
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 2.6e-69 266.2 229 62.0
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.4e-61 239.2 275 51.6
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 1.3e-60 237.3 201 64.7
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 8.3e-60 234.6 159 75.5
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 4.1e-59 232.3 160 73.8
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 5.4e-59 231.9 223 57.4
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 3.5e-58 229.2 214 58.9
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 1.2e-55 220.7 223 54.7
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 3.6e-55 219.2 166 68.1
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 3.7e-52 209.1 233 52.8
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 1.7e-49 200.3 313 41.5
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 6.2e-47 191.8 227 50.2
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 2.6e-45 186.4 207 54.6
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 2.9e-44 183.0 149 63.1
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 9.5e-40 167.9 226 46.0
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 1.3e-36 157.5 157 52.9
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 1.0e-33 147.9 85 82.4
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.0e-33 147.9 105 70.5
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 2.3e-33 146.7 411 31.4
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 3.8e-28 129.4 84 70.2
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 1.6e-26 124.0 70 82.9
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.3e-25 120.9 147 49.7
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 1.8e-22 110.5 66 81.8
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 2.4e-19 100.1 103 55.3
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 2.7e-18 96.7 51 88.2
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.3e-17 93.6 67 68.7
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 3.0e-17 93.2 79 64.6
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 3.3e-16 89.7 71 66.2
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 4.0e-14 82.8 56 73.2
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 5.8e-13 79.0 201 33.8
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.4e-11 74.3 57 64.9
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 2.4e-11 73.6 52 69.2
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 4.6e-10 69.3 99 41.4
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.0e-09 68.2 45 73.3


User provided reference genes

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