Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.013G063400 Gossypium raimondii HOM05D007421 ORTHO05D009203 8.8e-154 547.0 288 100.0
Gohir.A13G065600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 1.6e-150 536.2 286 98.3
Gohir.D13G056100 Gossypium hirsutum HOM05D007421 ORTHO05D009203 4.6e-110 401.7 205 99.0
Thecc.02G143500 Theobroma cacao HOM05D007421 ORTHO05D009203 2.4e-106 389.4 308 70.5
Gorai.005G217800 Gossypium raimondii HOM05D007421 ORTHO05D009203 5.8e-97 358.2 314 65.6
Gohir.A03G171600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 1.7e-96 356.7 314 65.9
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 1.2e-86 323.9 309 61.8
Gohir.D02G194950 Gossypium hirsutum HOM05D007421 ORTHO05D009203 1.3e-80 303.9 322 58.1
Manes.11G148500 Manihot esculenta HOM05D007421 ORTHO05D009203 3.8e-40 169.5 326 40.5
CSS0030012 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 4.4e-36 156.0 274 42.0
CiPaw.06G151100 Carya illinoinensis HOM05D007421 ORTHO05D009203 4.4e-36 156.0 261 42.1
CSS0048527 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 5.7e-36 155.6 274 42.0
DCAR_029217 Daucus carota HOM05D007421 ORTHO05D009203 5.7e-36 155.6 308 38.0
Cfa005578 Carpinus fangiana HOM05D007421 ORTHO05D009203 1.4e-34 151.0 302 35.8
Potri.005G176900 Populus trichocarpa HOM05D007421 ORTHO05D009203 3.1e-34 149.8 285 37.9
Cpa.g.sc0.12 Carica papaya HOM05D007421 ORTHO05D009203 7.0e-34 148.7 342 37.1
Dinv24220 Davidia involucrata HOM05D007421 ORTHO05D009203 2.0e-33 147.1 268 41.4
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 2.9e-32 143.3 275 40.4
Sabra05G0133500 Salix brachista HOM05D007421 ORTHO05D009203 2.9e-32 143.3 313 36.4
CAN.G1034.36 Capsicum annuum HOM05D007421 ORTHO05D009203 1.1e-31 141.4 234 40.6
Actinidia00249 Actinidia chinensis HOM05D007421 ORTHO05D009203 7.3e-31 138.7 276 41.3
TAR628G0675 Trochodendron aralioides HOM05D007421 ORTHO05D009203 6.1e-30 135.6 231 41.1
EL10Ac8g19356 Beta vulgaris HOM05D007421 ORTHO05D009203 8.0e-30 135.2 266 39.1
TWI59G0537 Tripterygium wilfordii HOM05D007421 ORTHO05D009203 1.8e-29 134.0 304 37.2
Nn5g28883 Nelumbo nucifera HOM05D007421 ORTHO05D009203 8.9e-29 131.7 228 39.5
Rhsim11G0134600 Rhododendron simsii HOM05D007421 ORTHO05D009203 7.5e-28 128.6 263 37.6
QL11p019404 Quercus lobata HOM05D007421 ORTHO05D009203 2.9e-27 126.7 225 40.9
Atru.chr6.906 Acer truncatum HOM05D007421 ORTHO05D009203 4.1e-26 122.9 252 38.1
Nitab4.5_0011639g0020 Nicotiana tabacum HOM05D007421 ORTHO05D009203 2.0e-25 120.6 233 38.2
CsaV3_7G012710 Cucumis sativus L. HOM05D007421 ORTHO05D009203 3.5e-25 119.8 224 38.8
Cc02_g21850 Coffea canephora HOM05D007421 ORTHO05D009203 5.9e-25 119.0 284 38.4
vmacro01809 Vaccinium macrocarpon HOM05D007421 ORTHO05D009203 2.3e-24 117.1 305 33.8
Sopen10g016990 Solanum pennellii HOM05D007421 ORTHO05D009203 3.9e-24 116.3 300 34.0
Peaxi162Scf00003g03742 Petunia axillaris HOM05D007421 ORTHO05D009203 6.6e-24 115.5 310 34.2
Lj9C318G13 Lonicera japonica HOM05D007421 ORTHO05D009203 2.5e-23 113.6 208 40.4
Solyc10g047040.3 Solanum lycopersicum HOM05D007421 ORTHO05D009203 2.5e-23 113.6 300 33.7
TPR.G10446 Trifolium pratense HOM05D007421 ORTHO05D009203 3.3e-23 113.2 234 35.9
Aqoxy5G02013 Aquilegia oxysepala HOM05D007421 ORTHO05D009203 4.3e-23 112.8 243 36.6
Potri.002G084750 Populus trichocarpa HOM05D007421 ORTHO05D009203 5.6e-23 112.5 270 35.6
ClCG09G021300 Citrullus lanatus HOM05D007421 ORTHO05D009203 7.3e-23 112.1 273 36.6
Prupe.1G559900 Prunus persica HOM05D007421 ORTHO05D009203 3.6e-22 109.8 311 33.1
Haze_10776 Corylus avellana HOM05D007421 ORTHO05D009203 6.2e-22 109.0 311 32.8
PGSC0003DMG400024171 Solanum tuberosum HOM05D007421 ORTHO05D009203 8.0e-22 108.6 259 34.4
Lj4g0022412 Lotus japonicus HOM05D007421 ORTHO05D009203 1.0e-21 108.2 288 32.6
Sed0000945 Sechium edule HOM05D007421 ORTHO05D009203 1.0e-21 108.2 230 36.5
Nitab4.5_0000078g0170 Nicotiana tabacum HOM05D007421 ORTHO05D009203 1.4e-21 107.8 260 35.4
Ca_18335_v3 Cicer arietinum L. HOM05D007421 ORTHO05D009203 2.3e-21 107.1 233 37.3
Nitab4.5_0004176g0040 Nicotiana tabacum HOM05D007421 ORTHO05D009203 4.0e-21 106.3 262 35.5
Psat7g097480 Pisum sativum HOM05D007421 ORTHO05D009203 2.0e-20 104.0 232 35.3
MD08G1222100 Malus domestica HOM05D007421 ORTHO05D009203 4.4e-20 102.8 229 38.9
Haze_09992 Corylus avellana HOM05D003963 ORTHO05D004558 1.3e-19 101.3 238 36.6
Sc08g0004770 Simmondsia chinensis HOM05D007421 ORTHO05D009203 1.3e-19 101.3 333 32.4
Ciclev10003479m.g Citrus clementina HOM05D007421 ORTHO05D009203 6.4e-19 99.0 296 32.1
Oeu000232.1 Olea europaea HOM05D007421 ORTHO05D009203 2.4e-18 97.1 293 31.7
DCAR_001801 Daucus carota HOM05D007421 ORTHO05D009203 3.2e-18 96.7 140 46.4
ECA236G4083 Erigeron canadensis HOM05D007421 ORTHO05D009203 3.2e-18 96.7 260 33.5
RcHm_v2.0_Chr7g0225501 Rosa chinensis HOM05D007421 ORTHO05D009203 3.5e-17 93.2 280 32.5
Medtr4g094292 Medicago truncatula HOM05D007421 ORTHO05D009203 4.6e-17 92.8 246 33.3
CDE02G3538 Ceratophyllum demersum HOM05D007421 ORTHO05D009203 6.6e-16 89.0 154 42.2
MBI07_g32548_MAGBIO Magnolia biondii HOM05D007421 ORTHO05D009203 2.1e-14 84.0 118 44.9
HPP92_013365 Vanilla planifolia HOM05D007421 ORTHO05D009203 6.8e-13 79.0 238 33.2
SGA_v2.0_scaffold332G48944 Striga asiatica HOM05D007421 ORTHO05D009203 2.6e-12 77.0 289 28.7
FAN18G4438 Fragaria x ananassa HOM05D007421 ORTHO05D009203 7.5e-12 75.5 281 31.0
VMungo0251G1640 Vigna mungo HOM05D007421 ORTHO05D009203 1.3e-11 74.7 259 31.3
ATR0753G155 Amborella trichopoda HOM05D007421 ORTHO05D009203 1.7e-11 74.3 169 37.9
CANSAT11G0077 Cannabis sativa HOM05D007421 ORTHO05D009203 3.7e-11 73.2 220 35.5
Eucgr.I02692 Eucalyptus grandis HOM05D007421 ORTHO05D009203 4.9e-11 72.8 302 29.8
Phvul.002G206600 Phaseolus vulgaris HOM05D007421 ORTHO05D009203 6.4e-11 72.4 251 31.9
Ah.09g232060 Amaranthus hybridus HOM05D007421 ORTHO05D009203 8.3e-11 72.0 267 32.6
GSVIVG01022264001 Vitis vinifera HOM05D007421 ORTHO05D009203 8.3e-11 72.0 145 35.9
FvH4_5g30620 Fragaria vesca HOM05D007421 ORTHO05D009203 1.1e-10 71.6 284 30.6
RcHm_v2.0_Chr5g0049711 Rosa chinensis HOM05D007421 ORTHO05D009203 1.9e-10 70.9 173 33.5
Hma1.2p1_0012F.1_g007610 Hydrangea macrophylla HOM05D007421 ORTHO05D009203 2.4e-10 70.5 61 67.2
RcHm_v2.0_Chr7g0236151 Rosa chinensis HOM05D007421 ORTHO05D009203 2.1e-09 67.4 167 34.1
FAN04G0435 Fragaria x ananassa HOM05D007421 ORTHO05D009203 6.0e-09 65.9 284 31.3
Pp3c1_21370 Physcomitrium patens HOM05D002710 ORTHO05D002905 1.3e-08 64.7 76 40.8
Pp3c2_17030 Physcomitrium patens HOM05D002710 ORTHO05D002905 1.3e-08 64.7 34 67.6
CBR_g30215 Chara braunii HOM05D002710 ORTHO05D009203 1.7e-08 64.3 69 44.9
SMO172G0209 Selaginella moellendorffii HOM05D004073 ORTHO05D004785 1.7e-08 64.3 32 75.0
SMO198G0058 Selaginella moellendorffii HOM05D002710 ORTHO05D002905 1.7e-08 64.3 32 75.0
Glyma.05G120200 Glycine max HOM05D007421 ORTHO05D009203 3.0e-08 63.5 229 29.3
SEGI_03000 Sequoiadendron giganteum HOM05D007421 ORTHO05D009203 3.9e-08 63.2 145 36.6
Migut.B00638 Erythranthe guttata HOM05D007421 ORTHO05D009203 8.6e-08 62.0 175 30.9
MCO11G228 Micromonas commoda HOM05D002710 ORTHO05D002905 1.1e-07 61.6 32 68.8
Cre03.g172800 Chlamydomonas reinhardtii HOM05D002710 ORTHO05D002905 1.5e-07 61.2 44 59.1
AagrBONN_evm.TU.Sc2ySwM_368.2304 Anthoceros agrestis HOM05D002710 ORTHO05D002905 9.5e-07 58.5 80 36.2
QL01p003296 Quercus lobata HOM05D002710 ORTHO05D002905 3.6e-06 56.6 34 61.8
QL01p003323 Quercus lobata HOM05D002710 ORTHO05D002905 3.6e-06 56.6 34 61.8
QL01p003332 Quercus lobata HOM05D002710 ORTHO05D002905 3.6e-06 56.6 34 61.8
MD16G1035800 Malus domestica HOM05D002710 ORTHO05D002905 4.7e-06 56.2 34 61.8
Cfa015825 Carpinus fangiana HOM05D002710 ORTHO05D002905 6.2e-06 55.8 34 58.8
Haze_00668 Corylus avellana HOM05D002710 ORTHO05D002905 6.2e-06 55.8 34 58.8
Sabra10G0089300 Salix brachista HOM05D002710 ORTHO05D002905 8.1e-06 55.5 36 58.3


User provided reference genes

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