Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 3.6e-312 1073.5 530 100.0
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 9.5e-279 963.0 530 91.1
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 2.4e-266 921.8 530 88.5
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 2.8e-222 775.4 616 67.0
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 1.5e-215 753.1 529 72.2
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 7.7e-212 740.7 516 72.9
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 1.3e-211 740.0 525 72.8
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 1.9e-210 736.1 529 71.5
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 5.5e-210 734.6 533 70.5
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 3.9e-208 728.4 479 75.4
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 1.1e-207 726.9 531 69.3
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 3.3e-207 725.3 520 71.3
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 9.1e-205 717.2 530 69.8
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 9.1e-205 717.2 480 75.0
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 1.2e-204 716.8 515 69.7
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 1.2e-204 716.8 471 74.9
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 3.5e-204 715.3 464 76.3
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 1.0e-203 713.8 552 67.0
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 2.5e-202 709.1 529 67.7
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 7.2e-202 707.6 474 75.1
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.6e-201 706.4 532 69.0
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 1.6e-201 706.4 502 71.1
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 3.6e-201 705.3 508 69.9
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 8.0e-201 704.1 464 75.2
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.2e-199 700.3 487 71.7
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 7.5e-199 697.6 502 69.3
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 2.2e-198 696.0 521 68.5
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 8.2e-198 694.1 519 67.6
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 4.1e-197 691.8 488 70.3
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 4.1e-197 691.8 468 73.7
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 5.3e-197 691.4 490 70.0
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 9.1e-197 690.6 488 70.1
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.2e-196 690.3 528 66.1
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 1.2e-196 690.3 421 81.9
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 5.9e-196 688.0 529 68.1
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 7.7e-196 687.6 465 72.3
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 2.9e-195 685.6 521 67.9
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 6.5e-195 684.5 472 71.0
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 1.5e-194 683.3 480 71.0
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 3.2e-194 682.2 548 64.4
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 4.2e-194 681.8 524 66.6
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 2.1e-193 679.5 483 69.4
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 4.7e-193 678.3 528 66.1
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 1.0e-192 677.2 519 65.7
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 1.4e-192 676.8 518 65.8
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 1.4e-192 676.8 518 65.4
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 1.8e-192 676.4 502 67.9
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 4.0e-192 675.2 506 67.8
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 8.8e-192 674.1 518 65.4
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 8.8e-192 674.1 518 65.6
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 4.8e-190 668.3 486 69.1
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 4.8e-190 668.3 463 71.9
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 6.3e-190 667.9 529 66.7
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 4.1e-189 665.2 511 65.4
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 7.0e-189 664.5 506 65.6
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 7.0e-189 664.5 532 65.6
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 1.2e-188 663.7 523 63.9
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 1.6e-188 663.3 512 66.0
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 2.7e-188 662.5 476 69.7
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 2.7e-188 662.5 478 69.2
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 2.7e-188 662.5 472 69.7
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 1.3e-187 660.2 465 69.9
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 6.5e-187 657.9 466 70.2
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 8.5e-187 657.5 469 69.9
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 2.5e-186 656.0 480 68.1
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 2.6e-183 646.0 531 64.0
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 3.7e-182 642.1 420 76.2
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 3.5e-180 635.6 425 73.4
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 2.5e-178 629.4 424 73.6
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 4.7e-177 625.2 540 61.5
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 8.9e-176 620.9 473 66.8
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 8.3e-174 614.4 481 65.7
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 1.0e-171 607.4 426 69.7
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 1.2e-169 600.5 471 67.1
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 1.6e-169 600.1 422 69.7
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 1.6e-169 600.1 426 70.4
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 4.9e-166 588.6 424 67.7
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 2.0e-164 583.2 466 64.2
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 6.6e-163 578.2 378 76.2
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.4e-160 570.5 483 62.9
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 3.2e-157 559.3 427 65.8
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 7.8e-156 554.7 462 62.1
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 9.5e-154 547.7 423 64.1
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 2.1e-153 546.6 380 70.3
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 1.8e-152 543.5 478 57.7
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 1.8e-152 543.5 476 60.7
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 4.9e-150 535.4 463 57.9
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 4.9e-150 535.4 448 60.9
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.5e-143 513.8 373 68.1
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 8.4e-142 508.1 356 71.6
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 2.8e-129 466.5 470 52.8
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 1.2e-124 451.1 462 52.2
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 4.3e-114 416.0 254 75.6
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 1.4e-112 411.0 503 45.3
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 9.1e-96 355.1 290 61.4
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 1.2e-95 354.8 327 58.4
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 4.5e-95 352.8 327 58.4
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 5.0e-94 349.4 480 42.7
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 3.0e-91 340.1 206 76.2
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 1.6e-84 317.8 323 51.7
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 1.4e-75 288.1 267 59.9
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 1.2e-71 275.0 228 63.6
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.1e-64 251.9 211 61.6
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 2.3e-62 244.2 347 44.4
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 4.6e-55 219.9 492 35.6
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 1.9e-53 214.5 162 64.8
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 5.4e-40 169.9 106 71.7
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 1.5e-34 151.8 97 73.2
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 1.4e-32 145.2 84 84.5
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 3.6e-28 130.6 89 74.2
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 5.8e-18 96.7 58 75.9
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 2.1e-12 78.2 42 90.5
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.4e-08 65.5 44 68.2


User provided reference genes

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