Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G169400 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.2e-89 331.6 159 100.0
Gohir.D04G176456 Gossypium hirsutum HOM05D002599 ORTHO05D036100 3.5e-67 258.5 161 82.6
Gohir.D04G176540 Gossypium hirsutum HOM05D002599 ORTHO05D036100 7.7e-67 257.3 161 82.0
Gorai.012G168500 Gossypium raimondii HOM05D002599 ORTHO05D036100 1.5e-65 253.1 161 81.4
Gohir.A04G133025 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-64 250.0 160 79.4
Gohir.A04G133251 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.0e-64 247.3 162 77.8
Gohir.A04G133650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.5e-57 224.6 155 74.8
Gohir.A04G133401 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.5e-57 223.8 155 75.5
Gorai.012G167600 Gossypium raimondii HOM05D002599 ORTHO05D047328 1.2e-27 127.1 132 49.2
Gohir.D04G176066 Gossypium hirsutum HOM05D002599 ORTHO05D047328 2.7e-27 125.9 132 48.5
Gohir.D04G176526 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.5e-27 125.6 193 39.4
Gorai.012G168100 Gossypium raimondii HOM05D002599 ORTHO05D036187 6.0e-27 124.8 187 39.0
Thecc.02G022700 Theobroma cacao HOM05D002599 ORTHO05D012670 6.6e-26 121.3 103 57.3
Gohir.A04G133075 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.9e-25 119.8 190 40.5
Gorai.012G168400 Gossypium raimondii HOM05D002599 ORTHO05D036187 1.9e-25 119.8 194 36.1
Gohir.D04G176428 Gossypium hirsutum HOM05D002599 ORTHO05D036187 3.3e-25 119.0 194 36.1
Gorai.012G167800 Gossypium raimondii HOM05D002599 ORTHO05D012670 2.1e-24 116.3 108 54.6
Thecc.02G023200 Theobroma cacao HOM05D002599 ORTHO05D012670 6.2e-24 114.8 134 47.8
Gohir.D04G176200 Gossypium hirsutum HOM05D002599 ORTHO05D012670 4.0e-23 112.1 106 52.8
Gorai.012G167700 Gossypium raimondii HOM05D002599 ORTHO05D012670 4.0e-23 112.1 106 52.8
Gohir.D04G176554 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.2e-23 111.7 183 39.9
Thecc.02G022300 Theobroma cacao HOM05D002599 ORTHO05D012670 6.8e-23 111.3 136 44.9
Gohir.D04G176470 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.9e-23 110.9 183 39.9
Gohir.D04G176250 Gossypium hirsutum HOM05D002599 ORTHO05D012670 1.5e-22 110.2 102 53.9
COL.COLO4_17742 Corchorus olitorius HOM05D002599 ORTHO05D012670 4.4e-22 108.6 100 57.0
Gohir.A04G132600 Gossypium hirsutum HOM05D002599 ORTHO05D012670 5.8e-22 108.2 106 51.9
Thecc.02G021800 Theobroma cacao HOM05D002599 ORTHO05D012670 5.8e-22 108.2 103 54.4
Gorai.012G169200 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.6e-22 107.8 73 69.9
Thecc.02G022600 Theobroma cacao HOM05D002599 ORTHO05D012670 7.6e-22 107.8 136 45.6
Thecc.02G024300 Theobroma cacao HOM05D002599 ORTHO05D012670 7.6e-22 107.8 133 45.1
COL.COLO4_17749 Corchorus olitorius HOM05D002599 ORTHO05D012670 2.9e-21 105.9 103 55.3
Thecc.02G024100 Theobroma cacao HOM05D002599 ORTHO05D012670 2.9e-21 105.9 153 39.2
Gohir.D01G173600 Gossypium hirsutum HOM05D002599 ORTHO05D012670 8.4e-21 104.4 106 52.8
Gorai.002G215700 Gossypium raimondii HOM05D002599 ORTHO05D012670 8.4e-21 104.4 106 52.8
Thecc.02G022200 Theobroma cacao HOM05D002599 ORTHO05D012670 3.2e-20 102.4 103 51.5
Gohir.A01G182540 Gossypium hirsutum HOM05D002599 ORTHO05D012670 7.1e-20 101.3 106 51.9
Gohir.D04G176484 Gossypium hirsutum HOM05D002599 ORTHO05D029872 1.6e-19 100.1 107 49.5
Gohir.A04G133150 Gossypium hirsutum HOM05D002599 ORTHO05D029872 3.5e-19 99.0 107 49.5
Gorai.012G168700 Gossypium raimondii HOM05D002599 ORTHO05D029872 3.5e-19 99.0 107 48.6
Gohir.D04G176568 Gossypium hirsutum HOM05D002599 ORTHO05D012670 1.3e-18 97.1 107 48.6
Gorai.012G169000 Gossypium raimondii HOM05D002599 ORTHO05D029872 5.6e-17 91.7 100 48.0
Gorai.012G168300 Gossypium raimondii HOM05D002599 ORTHO05D047846 1.3e-16 90.5 99 47.5
COL.COLO4_17741 Corchorus olitorius HOM05D001654 ORTHO05D002773 1.8e-15 86.7 102 49.0
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 1.5e-14 83.6 101 46.5
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.4e-13 78.2 103 47.6
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-12 75.5 103 44.7
Gohir.D04G176498 Gossypium hirsutum HOM05D002599 ORTHO05D047810 1.2e-11 73.9 105 40.0
Gorai.012G168900 Gossypium raimondii HOM05D002599 ORTHO05D047810 1.6e-11 73.6 105 40.0
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-11 73.6 103 45.6
Gohir.D04G176414 Gossypium hirsutum HOM05D002599 ORTHO05D047846 2.1e-11 73.2 99 42.4
Gohir.A04G130724 Gossypium hirsutum HOM05D002599 ORTHO05D012670 3.5e-11 72.4 103 39.8
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.5e-11 72.4 108 40.7
Gohir.A04G133451 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.6e-11 72.0 105 39.0
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.0e-11 71.6 108 40.7
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.0e-11 71.6 108 43.5
Gorai.012G168800 Gossypium raimondii HOM05D002599 ORTHO05D036327 7.9e-11 71.2 105 40.0
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.9e-11 71.2 105 43.8
Sabra15G0010100 Salix brachista HOM05D002599 ORTHO05D001895 7.9e-11 71.2 100 41.0
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 7.9e-11 71.2 110 38.2
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 7.9e-11 71.2 111 39.6
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-10 70.5 103 44.7
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 3.9e-10 68.9 104 38.5
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 5.1e-10 68.6 110 39.1
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 5.1e-10 68.6 110 39.1
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.7e-10 67.8 115 36.5
Gorai.012G169100 Gossypium raimondii HOM05D002599 ORTHO05D036327 1.1e-09 67.4 105 37.1
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-09 67.0 110 40.9
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.5e-09 67.0 112 34.8
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-09 66.6 112 38.4
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.5e-09 66.2 109 39.4
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 2.5e-09 66.2 114 38.6
Gohir.D04G176582 Gossypium hirsutum HOM05D002599 ORTHO05D036327 3.3e-09 65.9 105 37.1
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 3.3e-09 65.9 107 40.2
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 3.3e-09 65.9 115 39.1
Sabra15G0012600 Salix brachista HOM05D002599 ORTHO05D001895 4.3e-09 65.5 106 37.7
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 4.3e-09 65.5 112 34.8
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 9.6e-09 64.3 108 35.2
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-08 63.5 108 38.0
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-08 63.5 115 35.7
Duzib147G0900 Durio zibethinus HOM05D002599 ORTHO05D001895 2.1e-08 63.2 120 39.2
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.1e-08 63.2 114 34.2
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.1e-08 63.2 114 34.2
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-08 62.8 109 37.6
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 4.8e-08 62.0 115 37.4
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.8e-08 62.0 130 34.6
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 8.1e-08 61.2 120 35.8
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-07 60.8 126 36.5
Gorai.012G167300 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.4e-07 60.5 106 37.7
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-07 60.1 109 34.9
Gohir.D04G175900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.4e-07 59.7 106 37.7
Thecc.04G013200 Theobroma cacao HOM05D002599 ORTHO05D001895 3.1e-07 59.3 97 38.1
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.0e-07 58.9 108 38.0
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.0e-07 58.9 108 38.0
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.3e-07 58.5 110 33.6
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.3e-07 58.5 110 33.6
Potri.015G017000 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.9e-07 58.2 80 45.0
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.0e-07 57.8 119 33.6
Thecc.07G108400 Theobroma cacao HOM05D002599 ORTHO05D001895 9.0e-07 57.8 111 32.4
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 9.0e-07 57.8 115 33.9
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.2e-06 57.4 86 40.7
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-06 57.4 108 38.0
Thecc.04G013500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-06 57.4 102 39.2
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-06 57.0 128 32.8
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-06 57.0 111 40.5
Prupe.1G574300 Prunus persica HOM05D002599 ORTHO05D001895 1.5e-06 57.0 112 33.9
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.5e-06 57.0 104 35.6
Atru.chr2.67 Acer truncatum HOM05D002599 ORTHO05D001895 2.0e-06 56.6 115 38.3
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-06 56.2 110 38.2
Thecc.07G108700 Theobroma cacao HOM05D002599 ORTHO05D001895 2.6e-06 56.2 108 33.3
COL.COLO4_29044 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.4e-06 55.8 98 40.8
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 3.4e-06 55.8 136 25.7
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 4.5e-06 55.5 109 34.9
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.9e-06 54.3 110 39.1


User provided reference genes

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