Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 0.0e+00 1213.7 665 100.0
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 0.0e+00 1212.2 665 99.8
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 3.3e-276 954.9 663 77.7
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 7.5e-249 864.0 629 73.9
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 1.8e-242 842.8 673 70.6
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 9.9e-225 783.9 447 98.4
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 5.5e-215 751.5 675 63.0
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 2.8e-211 739.2 673 61.5
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 2.0e-209 733.0 679 61.1
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 7.6e-209 731.1 667 62.4
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 2.1e-206 723.0 667 61.6
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 3.7e-203 712.2 670 60.1
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 4.8e-203 711.8 675 60.6
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 4.1e-202 708.8 674 61.0
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 1.5e-201 706.8 670 60.4
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 7.7e-201 704.5 674 60.7
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 1.1e-199 700.7 668 62.9
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 3.2e-199 699.1 680 57.2
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 5.5e-199 698.4 672 59.1
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 2.3e-197 693.0 661 60.2
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 1.5e-196 690.3 679 58.6
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.5e-196 689.5 673 58.5
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 8.2e-195 684.5 697 56.8
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.9e-192 676.0 667 57.3
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 1.1e-191 674.1 677 58.1
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 7.2e-191 671.4 664 57.2
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.4e-189 667.2 677 57.5
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 1.8e-189 666.8 681 56.5
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 3.0e-189 666.0 720 55.3
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 3.9e-189 665.6 681 56.7
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 2.0e-188 663.3 677 57.2
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 2.2e-187 659.8 647 58.6
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.4e-186 656.4 660 57.1
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.6e-185 652.9 673 56.5
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 4.7e-182 642.1 666 55.0
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 8.0e-182 641.3 695 56.1
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 3.3e-180 636.0 660 55.3
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 7.4e-180 634.8 651 56.4
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 2.2e-179 633.3 673 55.3
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 2.8e-179 632.9 666 54.7
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 7.0e-178 628.2 802 49.5
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 1.0e-176 624.4 667 55.5
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 3.8e-176 622.5 667 54.4
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 1.1e-175 620.9 685 53.6
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 6.1e-174 615.1 659 54.3
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 1.0e-173 614.4 668 53.3
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 2.6e-172 609.8 666 53.8
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 3.3e-172 609.4 668 53.1
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.3e-171 607.4 663 53.4
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 2.8e-171 606.3 655 55.0
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 3.7e-171 605.9 675 52.7
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 5.3e-170 602.1 667 52.0
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 3.5e-169 599.4 703 53.8
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 4.5e-169 599.0 674 53.1
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.3e-168 597.4 676 51.5
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 3.8e-168 595.9 667 51.7
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 5.0e-168 595.5 615 56.3
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 3.6e-166 589.3 667 51.4
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.0e-165 587.8 694 51.2
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 1.8e-165 587.0 549 58.3
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 6.8e-165 585.1 664 51.7
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 8.8e-165 584.7 771 47.5
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 8.3e-163 578.2 655 53.0
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 3.1e-162 576.2 681 50.5
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 4.1e-162 575.9 663 50.7
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 2.7e-161 573.2 669 53.5
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 1.3e-160 570.9 671 53.1
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.7e-160 570.5 665 50.1
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.9e-160 569.7 621 54.6
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 1.1e-159 567.8 670 53.4
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 2.1e-158 563.5 696 51.7
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.0e-157 561.2 670 53.1
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 1.2e-156 557.8 667 49.3
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 2.8e-155 553.1 676 47.9
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 6.3e-155 552.0 693 51.4
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 8.3e-155 551.6 670 47.8
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 1.1e-151 541.2 668 50.3
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.9e-151 540.4 673 50.4
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 4.6e-145 519.2 519 56.1
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 1.9e-143 513.8 476 60.5
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 2.8e-142 510.0 672 45.8
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 4.1e-138 496.1 671 44.9
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 4.3e-135 486.1 473 59.0
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.8e-133 480.7 692 44.8
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 2.2e-131 473.8 608 46.9
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 3.2e-130 469.9 506 54.2
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 1.3e-128 464.5 723 43.2
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 1.9e-127 460.7 628 47.0
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 3.3e-127 459.9 681 43.9
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.9e-123 446.0 446 57.4
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 4.8e-118 429.5 693 41.8
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 4.9e-115 419.5 676 42.8
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.4e-114 417.2 217 99.1
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 2.1e-113 414.1 501 49.9
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.1e-110 404.1 671 39.8
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 3.6e-110 403.3 671 40.7
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 3.6e-110 403.3 684 41.1
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 5.3e-109 399.4 541 46.2
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.4e-106 391.3 430 55.8
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 1.3e-102 378.3 665 38.6
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 1.1e-101 375.2 518 44.4
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 7.6e-100 369.0 516 44.8
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 3.7e-86 323.6 289 66.8
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 2.9e-83 313.9 849 32.4
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 1.1e-74 285.4 529 35.9
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.1e-66 258.8 320 52.2
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 4.2e-66 256.9 165 80.6
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 8.8e-56 222.6 203 59.1
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 4.8e-54 216.9 344 44.2
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 1.2e-52 212.2 153 71.2
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 2.0e-52 211.5 812 26.0
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.8e-51 207.2 150 73.3
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 3.5e-44 184.1 784 27.2
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 4.5e-44 183.7 219 47.5
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 7.8e-36 156.4 189 48.7
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 2.0e-31 141.7 325 35.1
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 9.5e-26 122.9 101 63.4
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 1.6e-25 122.1 175 40.6
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 2.8e-25 121.3 78 76.9
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.2e-17 95.9 94 60.6
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.1e-17 95.1 91 61.5
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.4e-16 92.4 90 63.3
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 7.1e-13 80.1 77 53.2
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 6.0e-12 77.0 52 69.2
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.3e-11 75.9 94 47.9
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 8.1e-09 66.6 94 41.5
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 1.4e-08 65.9 47 68.1
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 7.6e-07 60.1 126 35.7


User provided reference genes

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