Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 9.1e-121 436.8 204 100.0
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 7.2e-118 427.2 204 97.5
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.6e-117 424.9 204 97.1
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 1.6e-93 346.3 214 80.8
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 8.3e-90 334.0 211 78.7
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 9.2e-89 330.5 208 79.3
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.5e-86 322.4 211 78.7
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.2e-83 313.5 211 78.2
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 5.8e-83 311.2 215 72.6
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.3e-82 310.1 211 77.3
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 3.2e-65 252.3 214 63.6
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 1.6e-64 250.0 216 62.5
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 2.1e-64 249.6 192 63.0
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 3.5e-64 248.8 216 62.0
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 6.0e-64 248.1 216 61.1
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 6.0e-64 248.1 218 61.9
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 7.9e-64 247.7 214 62.1
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 7.9e-64 247.7 216 61.6
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.9e-63 245.4 213 62.0
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 1.1e-62 243.8 216 60.6
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 7.4e-62 241.1 209 59.3
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.6e-61 240.0 199 60.8
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.1e-61 239.6 218 60.1
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 6.2e-61 238.0 199 62.3
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 6.2e-61 238.0 234 56.4
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 8.1e-61 237.7 218 58.7
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.2e-59 233.8 207 59.9
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 2.0e-59 233.0 220 57.7
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 4.5e-59 231.9 216 55.6
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 4.5e-59 231.9 199 61.8
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 9.9e-59 230.7 216 54.6
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 1.3e-58 230.3 211 58.3
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 2.9e-58 229.2 207 59.9
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 2.9e-58 229.2 205 59.5
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 7.1e-57 224.6 206 57.8
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 1.5e-54 216.9 209 57.4
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 9.6e-54 214.2 191 59.7
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 2.1e-53 213.0 213 55.4
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 2.4e-52 209.5 201 54.2
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 2.4e-52 209.5 226 52.2
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 4.0e-52 208.8 204 54.4
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 4.0e-52 208.8 212 54.7
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 1.5e-51 206.8 209 53.6
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 4.5e-51 205.3 215 50.7
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 1.0e-50 204.1 192 53.6
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.7e-50 203.4 203 52.7
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 2.9e-50 202.6 210 52.9
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 4.6e-48 195.3 205 53.2
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 1.2e-43 180.6 156 57.1
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 4.5e-43 178.7 198 48.0
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 2.2e-42 176.4 201 48.3
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 2.5e-41 172.9 192 49.0
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 5.5e-41 171.8 203 47.8
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 3.3e-38 162.5 158 52.5
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 9.7e-38 161.0 204 44.1
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 2.8e-37 159.5 214 44.9
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 9.0e-36 154.5 124 60.5
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 2.6e-35 152.9 228 42.5
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 5.5e-33 145.2 114 60.5
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 2.3e-31 139.8 201 41.8
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 6.3e-29 131.7 182 44.0
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 3.1e-28 129.4 163 43.6
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 6.9e-28 128.3 122 53.3
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 1.1e-25 120.9 180 39.4
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 3.6e-24 115.9 172 42.4
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 6.1e-24 115.2 134 47.8
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.0e-23 114.4 186 38.7
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.8e-23 113.6 109 50.5
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 2.0e-22 110.2 119 47.9
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 4.4e-22 109.0 116 50.9
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 9.7e-22 107.8 224 33.5
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.8e-21 106.3 89 62.9
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 2.4e-20 103.2 101 54.5
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 3.1e-20 102.8 92 53.3
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.3e-18 97.4 100 50.0
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 6.5e-18 95.1 99 49.5
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 2.5e-17 93.2 101 49.5
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 2.0e-14 83.6 103 45.6
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 4.8e-13 79.0 70 60.0


User provided reference genes

Program Settings