Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 7.0e-78 293.9 149 100.0
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 7.2e-75 283.9 151 97.4
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 1.7e-68 262.7 148 92.6
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 1.9e-59 232.6 151 79.5
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 2.4e-54 215.7 151 75.5
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.3e-47 193.4 156 66.0
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 1.1e-46 190.3 160 65.0
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 7.0e-46 187.6 146 67.8
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 1.2e-45 186.8 146 67.8
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 4.6e-45 184.9 157 66.2
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.7e-44 183.0 158 62.7
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 2.3e-44 182.6 149 65.8
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 3.3e-43 178.7 126 70.6
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 3.3e-43 178.7 160 63.1
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 4.3e-43 178.3 153 61.4
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 4.3e-43 178.3 149 61.7
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 4.3e-43 178.3 147 64.6
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 5.6e-43 177.9 154 61.7
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 7.3e-43 177.6 154 61.0
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 2.1e-42 176.0 156 60.9
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 6.2e-42 174.5 151 63.6
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 8.1e-42 174.1 152 61.2
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 1.4e-41 173.3 140 63.6
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 1.4e-41 173.3 151 61.6
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 1.4e-41 173.3 147 63.9
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 1.8e-41 172.9 126 67.5
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 2.3e-41 172.6 156 59.0
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 8.9e-41 170.6 112 79.5
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 8.9e-41 170.6 147 60.5
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 1.5e-40 169.9 149 61.7
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 4.4e-40 168.3 159 56.0
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 5.8e-40 167.9 123 65.0
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 5.8e-40 167.9 143 58.7
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.3e-39 166.8 150 59.3
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.7e-39 166.4 134 61.9
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 2.2e-39 166.0 159 56.0
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 2.2e-39 166.0 159 56.6
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 2.2e-39 166.0 147 57.1
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 2.2e-39 166.0 120 65.0
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 4.9e-39 164.9 126 63.5
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 4.9e-39 164.9 144 55.6
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 6.4e-39 164.5 150 60.7
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 6.4e-39 164.5 144 61.1
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 8.3e-39 164.1 159 54.7
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 8.3e-39 164.1 121 66.9
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 1.1e-38 163.7 117 66.7
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 1.4e-38 163.3 145 57.9
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 1.4e-38 163.3 150 59.3
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 3.2e-38 162.2 128 64.8
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 5.4e-38 161.4 154 56.5
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 7.1e-38 161.0 153 58.8
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 1.2e-37 160.2 147 58.5
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.6e-37 159.8 144 57.6
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 2.1e-37 159.5 144 58.3
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 2.1e-37 159.5 156 56.4
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 3.5e-37 158.7 153 54.9
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 4.6e-37 158.3 149 55.0
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 6.0e-37 157.9 118 64.4
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 7.8e-37 157.5 150 57.3
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 7.8e-37 157.5 156 57.7
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 1.0e-36 157.1 158 57.0
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 1.0e-36 157.1 148 59.5
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 1.0e-36 157.1 158 55.7
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 2.3e-36 156.0 144 57.6
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 2.3e-36 156.0 116 63.8
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 2.3e-36 156.0 155 56.1
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 2.3e-36 156.0 155 56.1
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 3.9e-36 155.2 150 59.3
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 5.1e-36 154.8 122 66.4
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 5.1e-36 154.8 158 53.2
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 6.6e-36 154.5 155 53.5
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 6.6e-36 154.5 123 61.8
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 6.6e-36 154.5 122 65.6
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 8.6e-36 154.1 119 63.9
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 8.6e-36 154.1 119 63.9
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 8.6e-36 154.1 151 57.6
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 1.1e-35 153.7 140 55.0
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 1.1e-35 153.7 140 55.0
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 1.1e-35 153.7 150 56.7
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 1.9e-35 152.9 134 58.2
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 4.3e-35 151.8 122 63.1
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 5.6e-35 151.4 122 63.9
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 4.7e-34 148.3 147 55.8
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 3.1e-33 145.6 164 51.8
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 3.1e-33 145.6 164 51.8
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 5.2e-33 144.8 111 62.2
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 1.2e-32 143.7 158 52.5
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 2.0e-32 142.9 99 69.7
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 4.4e-32 141.7 122 60.7
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 7.6e-32 141.0 146 53.4
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 1.3e-31 140.2 98 67.3
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.2e-31 139.4 99 63.6
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 1.4e-30 136.7 154 50.0
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 1.2e-29 133.7 86 70.9
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 1.6e-29 133.3 97 62.9
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 2.1e-29 132.9 109 59.6
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 1.0e-28 130.6 101 62.4
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 1.0e-28 130.6 115 52.2
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 2.3e-28 129.4 87 81.6
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 3.9e-28 128.6 109 58.7
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 1.2e-26 123.6 102 56.9
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 1.4e-25 120.2 123 52.8
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 2.4e-25 119.4 98 59.2
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 8.7e-20 100.9 72 66.7
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 8.7e-20 100.9 90 54.4
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 2.5e-19 99.4 122 44.3
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 4.3e-11 72.0 75 46.7
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 3.1e-09 65.9 100 37.0
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 6.9e-09 64.7 127 30.7
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 9.0e-09 64.3 84 42.9
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 9.9e-08 60.8 98 31.6


User provided reference genes

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