Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G132600 Gossypium raimondii HOM05D007156 ORTHO05D003871 4.1e-57 224.6 118 100.0
Gohir.A04G106700 Gossypium hirsutum HOM05D007156 ORTHO05D003871 1.4e-52 209.5 119 95.8
Gohir.D04G146551 Gossypium hirsutum HOM05D007156 ORTHO05D003871 4.3e-38 161.4 82 98.8
Thecc.02G165500 Theobroma cacao HOM05D007156 ORTHO05D003871 1.3e-26 123.2 119 64.7
Gorai.005G208200 Gossypium raimondii HOM05D007156 ORTHO05D003871 1.2e-24 116.7 123 61.8
Gohir.D02G185700 Gossypium hirsutum HOM05D007156 ORTHO05D003871 2.1e-24 115.9 123 61.8
Gohir.A03G162600 Gossypium hirsutum HOM05D007156 ORTHO05D003871 7.8e-24 114.0 123 60.2
COL.COLO4_13040 Corchorus olitorius HOM05D007156 ORTHO05D003871 2.4e-20 102.4 113 59.3
CSS0000680 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 4.2e-17 91.7 120 52.5
Atru.chr6.3108 Acer truncatum HOM05D007156 ORTHO05D003871 4.8e-13 78.2 112 50.0
Psat7g163320 Pisum sativum HOM05D007156 ORTHO05D003871 4.8e-13 78.2 128 46.1
Dinv18559 Davidia involucrata HOM05D007156 ORTHO05D003871 8.1e-13 77.4 111 51.4
Ciclev10017232m.g Citrus clementina HOM05D007156 ORTHO05D003871 1.4e-12 76.6 113 52.2
Cfa014479 Carpinus fangiana HOM05D007156 ORTHO05D003871 2.4e-12 75.9 126 50.8
VMungo1127G0041 Vigna mungo HOM05D007156 ORTHO05D003871 2.4e-12 75.9 129 42.6
Potri.013G152300 Populus trichocarpa HOM05D007156 ORTHO05D003871 4.0e-12 75.1 108 50.9
Manes.12G077701 Manihot esculenta HOM05D007156 ORTHO05D003871 5.3e-12 74.7 120 47.5
Phvul.005G111100 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 5.3e-12 74.7 122 44.3
CSS0043735 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 6.9e-12 74.3 117 42.7
Haze_12992 Corylus avellana HOM05D007156 ORTHO05D003871 1.5e-11 73.2 123 50.4
Sabra13G0122400 Salix brachista HOM05D007156 ORTHO05D003871 2.0e-11 72.8 109 47.7
Hma1.2p1_0712F.1_g207550 Hydrangea macrophylla HOM05D007156 ORTHO05D003871 3.4e-11 72.0 126 45.2
QL08p034497 Quercus lobata HOM05D007156 ORTHO05D003871 3.4e-11 72.0 118 49.2
TAR271G0004 Trochodendron aralioides HOM05D007156 ORTHO05D003871 7.6e-11 70.9 108 46.3
Lj3g0000666 Lotus japonicus HOM05D007156 ORTHO05D003871 1.7e-10 69.7 124 43.5
Glyma.12G103200 Glycine max HOM05D007156 ORTHO05D003871 3.8e-10 68.6 50 76.0
Phvul.011G107900 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 3.8e-10 68.6 125 43.2
TPR.G19047 Trifolium pratense HOM05D007156 ORTHO05D003871 4.9e-10 68.2 133 42.1
Glyma.06G301200 Glycine max HOM05D007156 ORTHO05D003871 8.4e-10 67.4 129 42.6
CiPaw.03G165400 Carya illinoinensis HOM05D007156 ORTHO05D003871 1.4e-09 66.6 127 44.9
Glyma.13G304200 Glycine max HOM05D007156 ORTHO05D003871 1.4e-09 66.6 120 44.2
MBI18_g20355_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.4e-09 66.6 54 68.5
VMungo1080G0311 Vigna mungo HOM05D007156 ORTHO05D003871 1.4e-09 66.6 112 42.9
RcHm_v2.0_Chr2g0160641 Rosa chinensis HOM05D007156 ORTHO05D003871 3.2e-09 65.5 106 48.1
Medtr0945s0020 Medicago truncatula HOM05D007156 ORTHO05D003871 4.2e-09 65.1 109 46.8
Cpa.g.sc34.47 Carica papaya HOM05D007156 ORTHO05D003871 5.5e-09 64.7 108 44.4
CiPaw.04G120100 Carya illinoinensis HOM05D007156 ORTHO05D003871 5.5e-09 64.7 124 46.8
FAN05G2387 Fragaria x ananassa HOM05D007156 ORTHO05D003871 5.5e-09 64.7 111 47.7
Sed0007405 Sechium edule HOM05D007156 ORTHO05D003871 5.5e-09 64.7 108 45.4
Potri.019G125100 Populus trichocarpa HOM05D007156 ORTHO05D003871 9.3e-09 63.9 106 48.1
FAN02G1242 Fragaria x ananassa HOM05D007156 ORTHO05D003871 1.2e-08 63.5 111 46.8
Sabra19G0123400 Salix brachista HOM05D007156 ORTHO05D003871 1.2e-08 63.5 102 45.1
TPR.G18057 Trifolium pratense HOM05D007156 ORTHO05D003871 1.6e-08 63.2 120 39.2
ClCG02G001520 Citrullus lanatus HOM05D007156 ORTHO05D003871 2.7e-08 62.4 50 70.0
FAN09G0550 Fragaria x ananassa HOM05D007156 ORTHO05D003871 2.7e-08 62.4 111 45.9
Lalb_Chr24g0393601 Lupinus albus HOM05D007156 ORTHO05D003871 3.5e-08 62.0 107 39.3
Ca_01559_v3 Cicer arietinum L. HOM05D007156 ORTHO05D003871 6.0e-08 61.2 63 55.6
FvH4_6g43890 Fragaria vesca HOM05D007156 ORTHO05D003871 7.9e-08 60.8 120 45.8
FAN14G5947 Fragaria x ananassa HOM05D007156 ORTHO05D003871 7.9e-08 60.8 120 45.8
MBI02_g42366_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.0e-07 60.5 51 66.7
MBI02_g43088_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.0e-07 60.5 51 66.7
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea HOM05D007156 ORTHO05D003871 2.3e-07 59.3 67 56.7
Psat5g266920 Pisum sativum HOM05D007156 ORTHO05D003871 2.3e-07 59.3 114 38.6
MBI02_g42365_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 3.9e-07 58.5 54 63.0
MBI02_g43089_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 3.9e-07 58.5 54 63.0
Lj3g0015957 Lotus japonicus HOM05D007156 ORTHO05D003871 8.7e-07 57.4 121 47.1
Prupe.3G223500 Prunus persica HOM05D007156 ORTHO05D003871 8.7e-07 57.4 64 62.5
Sed0001937 Sechium edule HOM05D007156 ORTHO05D003871 1.1e-06 57.0 64 59.4
Actinidia12482 Actinidia chinensis HOM05D007156 ORTHO05D003871 1.5e-06 56.6 44 75.0
Rhsim06G0154900 Rhododendron simsii HOM05D007156 ORTHO05D003871 1.5e-06 56.6 56 60.7
Sabra19G0131200 Salix brachista HOM05D007156 ORTHO05D003871 1.9e-06 56.2 102 43.1
PGSC0003DMG400026188 Solanum tuberosum HOM05D007156 ORTHO05D003871 1.9e-06 56.2 86 46.5
CsaV3_7G003930 Cucumis sativus L. HOM05D007156 ORTHO05D003871 4.3e-06 55.1 100 44.0
Nitab4.5_0009996g0020 Nicotiana tabacum HOM05D007156 ORTHO05D003871 5.6e-06 54.7 65 55.4
Sopen07g026540 Solanum pennellii HOM05D007156 ORTHO05D003871 7.4e-06 54.3 67 52.2


User provided reference genes

Program Settings