Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 5.6e-104 380.9 192 100.0
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.6e-103 379.4 192 99.5
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.1e-72 276.9 173 84.4
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 3.3e-32 142.5 183 53.0
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 3.6e-26 122.5 184 47.3
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 4.2e-19 99.0 174 41.4
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 1.6e-18 97.1 179 41.3
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 4.0e-17 92.4 100 55.0
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 2.0e-16 90.1 175 38.9
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.4e-16 89.4 100 54.0
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 9.8e-16 87.8 165 43.0
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.3e-15 87.4 191 38.7
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 1.7e-15 87.0 185 39.5
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 2.2e-15 86.7 168 37.5
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 4.9e-15 85.5 175 40.0
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.8e-14 83.6 170 39.4
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 3.1e-14 82.8 169 40.2
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 9.2e-14 81.3 139 41.7
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 4.5e-13 79.0 179 35.8
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 5.9e-13 78.6 175 34.9
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 5.9e-13 78.6 173 35.8
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.3e-12 77.4 87 51.7
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.7e-12 77.0 175 34.9
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.7e-12 77.0 169 36.1
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.9e-12 76.3 168 38.7
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 5.0e-12 75.5 169 36.1
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.5e-11 73.9 168 36.9
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 1.5e-11 73.9 169 36.1
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 1.5e-11 73.9 152 39.5
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 2.5e-11 73.2 145 37.9
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 2.5e-11 73.2 170 37.1
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 9.5e-11 71.2 183 33.3
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.2e-10 70.9 174 30.5
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.2e-10 70.9 99 45.5
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.6e-10 70.5 168 36.3
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.1e-10 70.1 179 35.2
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 2.1e-10 70.1 170 34.1
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 2.8e-10 69.7 171 32.7
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 4.7e-10 68.9 175 36.0
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 6.1e-10 68.6 183 35.0
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 6.1e-10 68.6 161 37.3
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.0e-10 68.2 127 39.4
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 1.8e-09 67.0 116 38.8
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 1.8e-09 67.0 158 36.1
Nitab4.5_0000349g0170 Nicotiana tabacum HOM05D016316 ORTHO05D018871 5.2e-09 65.5 156 36.5
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 8.9e-09 64.7 81 53.1
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 8.9e-09 64.7 91 44.0
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 8.9e-09 64.7 76 50.0
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 1.2e-08 64.3 100 43.0
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 1.2e-08 64.3 170 33.5
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 1.2e-08 64.3 186 32.8
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 1.5e-08 63.9 106 39.6
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.0e-08 63.5 79 46.8
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 2.0e-08 63.5 81 45.7
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.6e-08 63.2 127 37.8
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.6e-08 63.2 77 48.1
Gorai.006G173200 Gossypium raimondii HOM05D036294 ORTHO05D036268 2.6e-08 63.2 81 51.9
ClCG04G008210 Citrullus lanatus HOM05D023073 ORTHO05D005174 3.4e-08 62.8 86 47.7
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 3.4e-08 62.8 72 41.7
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 3.4e-08 62.8 170 33.5
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 3.4e-08 62.8 136 39.7
Gohir.A09G156500 Gossypium hirsutum HOM05D036294 ORTHO05D036268 4.4e-08 62.4 70 55.7
Sed0010435 Sechium edule HOM05D023073 ORTHO05D005174 4.4e-08 62.4 83 45.8
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 5.8e-08 62.0 79 43.0
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 9.8e-08 61.2 150 34.0
Gohir.D09G151850 Gossypium hirsutum HOM05D036294 ORTHO05D036268 9.8e-08 61.2 81 50.6
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 9.8e-08 61.2 82 46.3
CARHR210990 Cardamine hirsuta HOM05D010528 ORTHO05D005174 2.2e-07 60.1 82 47.6
AL6G11650 Arabidopsis lyrata HOM05D010528 ORTHO05D005174 3.7e-07 59.3 82 47.6
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 3.7e-07 59.3 147 36.1
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 3.7e-07 59.3 112 43.8
vmacro20146 Vaccinium macrocarpon HOM05D005967 ORTHO05D005174 3.7e-07 59.3 79 41.8
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 4.9e-07 58.9 124 40.3
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 4.9e-07 58.9 161 32.3
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 4.9e-07 58.9 81 43.2
Carub.0006s0121 Capsella rubella HOM05D010528 ORTHO05D005174 6.4e-07 58.5 81 48.1
VMungo1383G3210 Vigna mungo HOM05D005967 ORTHO05D005174 6.4e-07 58.5 195 31.3
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 1.1e-06 57.8 167 34.7
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 1.1e-06 57.8 112 34.8
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 1.1e-06 57.8 143 37.1
Glyma.18G177800 Glycine max HOM05D005967 ORTHO05D005174 1.4e-06 57.4 177 33.3
SGA_v2.0_scaffold126G33790 Striga asiatica HOM05D005967 ORTHO05D005174 1.4e-06 57.4 95 45.3
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.4e-06 57.4 76 48.7
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.9e-06 57.0 168 31.5
PGR004G0898 Punica granatum HOM05D005967 ORTHO05D005174 2.4e-06 56.6 184 31.0
SalBow3G2287 Salvia bowleyana HOM05D005967 ORTHO05D005174 3.2e-06 56.2 107 40.2
THA.LOC104827013 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 4.1e-06 55.8 84 42.9
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 5.4e-06 55.5 96 42.7
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 5.4e-06 55.5 167 29.3
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 5.4e-06 55.5 71 49.3
Aa31LG1G22380 Aethionema arabicum HOM05D010528 ORTHO05D005174 7.0e-06 55.1 82 45.1
AT5G02420 Arabidopsis thaliana HOM05D010528 ORTHO05D005174 7.0e-06 55.1 111 37.8
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 7.0e-06 55.1 166 34.3
Glyma.08G358900 Glycine max HOM05D005967 ORTHO05D005174 9.2e-06 54.7 174 33.3
Sed0016652 Sechium edule HOM05D023073 ORTHO05D005174 9.2e-06 54.7 120 38.3
TPR.G5598 Trifolium pratense HOM05D005967 ORTHO05D005174 9.2e-06 54.7 77 44.2


User provided reference genes

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