Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G097900 Gossypium raimondii HOM05D003086 ORTHO05D003347 6.3e-38 160.2 78 100.0
Gorai.004G151100 Gossypium raimondii HOM05D003086 ORTHO05D003347 5.4e-29 130.6 86 79.1
Gohir.A08G124800 Gossypium hirsutum HOM05D003086 ORTHO05D003347 6.1e-25 117.1 83 73.5
Thecc.01G339800 Theobroma cacao HOM05D003086 ORTHO05D003347 4.2e-18 94.4 88 55.7
Gorai.007G110300 Gossypium raimondii HOM05D003086 ORTHO05D003347 8.3e-14 80.1 76 52.6
COL.COLO4_06232 Corchorus olitorius HOM05D003086 ORTHO05D003347 1.8e-13 79.0 67 62.7
Gohir.A11G098500 Gossypium hirsutum HOM05D003086 ORTHO05D003347 2.4e-13 78.6 76 51.3
Gohir.D11G103100 Gossypium hirsutum HOM05D003086 ORTHO05D003347 9.2e-13 76.6 76 51.3
Manes.05G021200 Manihot esculenta HOM05D003086 ORTHO05D003347 1.7e-11 72.4 82 48.8
Cpa.g.sc96.51 Carica papaya HOM05D003086 ORTHO05D003347 8.6e-11 70.1 73 52.1
Ciclev10022804m.g Citrus clementina HOM05D003086 ORTHO05D003347 2.1e-09 65.5 74 45.9
QL09p037005 Quercus lobata HOM05D003086 ORTHO05D003347 4.7e-09 64.3 78 41.0
Actinidia07974 Actinidia chinensis HOM05D003086 ORTHO05D003347 8.0e-09 63.5 65 50.8
CSS0006972 Camellia sinensis var. sinensis HOM05D003086 ORTHO05D003347 8.0e-09 63.5 67 49.3
CiPaw.05G227500 Carya illinoinensis HOM05D003086 ORTHO05D003347 8.0e-09 63.5 76 48.7
Nn3g18930 Nelumbo nucifera HOM05D003086 ORTHO05D003347 8.0e-09 63.5 71 50.7
MBI17_g21048_MAGBIO Magnolia biondii HOM05D003086 ORTHO05D003347 1.4e-08 62.8 70 52.9
Atru.chr5.701 Acer truncatum HOM05D003086 ORTHO05D003347 1.8e-08 62.4 67 44.8
Actinidia20253 Actinidia chinensis HOM05D003086 ORTHO05D003347 1.8e-08 62.4 36 72.2
Haze_15678 Corylus avellana HOM05D003086 ORTHO05D003347 4.0e-08 61.2 36 69.4
Rhsim07G0002900 Rhododendron simsii HOM05D003086 ORTHO05D003347 4.0e-08 61.2 79 44.3
TAR629G1883 Trochodendron aralioides HOM05D003086 ORTHO05D003347 4.0e-08 61.2 64 50.0
Cfa003782 Carpinus fangiana HOM05D003086 ORTHO05D003347 6.8e-08 60.5 36 69.4
Potri.002G173700 Populus trichocarpa HOM05D003086 ORTHO05D003347 8.9e-08 60.1 69 40.6
TAR636G1396 Trochodendron aralioides HOM05D003086 ORTHO05D003347 8.9e-08 60.1 62 45.2
Lsat_1_v5_gn_4_30961 Lactuca sativa HOM05D003086 ORTHO05D003347 1.2e-07 59.7 63 50.8
Medtr8g027380 Medicago truncatula HOM05D003086 ORTHO05D003347 2.0e-07 58.9 35 71.4
Glyma.07G054300 Glycine max HOM05D003086 ORTHO05D003347 2.6e-07 58.5 33 75.8
SHI13099 Sapria himalayana HOM05D003086 ORTHO05D003347 2.6e-07 58.5 57 52.6
Lsat_1_v5_gn_7_740 Lactuca sativa HOM05D003086 ORTHO05D003347 3.4e-07 58.2 34 73.5
TPR.G20234 Trifolium pratense HOM05D003086 ORTHO05D003347 3.4e-07 58.2 35 68.6
Phvul.010G115200 Phaseolus vulgaris HOM05D003086 ORTHO05D003347 4.4e-07 57.8 34 76.5
Lj3g0004362 Lotus japonicus HOM05D003086 ORTHO05D003347 5.8e-07 57.4 31 83.9
Oeu027320.1 Olea europaea HOM05D003086 ORTHO05D003347 5.8e-07 57.4 69 46.4
Migut.B01892 Erythranthe guttata HOM05D003086 ORTHO05D003347 7.5e-07 57.0 80 42.5
HPP92_025720 Vanilla planifolia HOM05D003086 ORTHO05D003347 7.5e-07 57.0 74 44.6
Aqoxy5G04301 Aquilegia oxysepala HOM05D003086 ORTHO05D003347 9.8e-07 56.6 35 62.9
Ca_23518_v3 Cicer arietinum L. HOM05D003086 ORTHO05D003347 2.9e-06 55.1 35 68.6
Psat4g162600 Pisum sativum HOM05D003086 ORTHO05D003347 4.9e-06 54.3 35 65.7
Sopen05g028970 Solanum pennellii HOM05D003086 ORTHO05D003347 4.9e-06 54.3 33 69.7


User provided reference genes

Program Settings