Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 9.8e-214 746.5 370 100.0
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 8.0e-200 700.3 370 94.6
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 3.3e-169 598.6 368 80.4
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 7.1e-140 501.1 277 91.7
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 9.7e-137 490.7 306 78.8
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 2.2e-125 453.0 370 60.3
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 1.1e-124 450.7 368 62.0
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 7.2e-124 448.0 370 61.9
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 1.2e-123 447.2 371 60.4
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 1.1e-121 440.7 364 60.2
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 2.0e-121 439.9 371 58.5
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 2.6e-121 439.5 367 60.5
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 1.7e-120 436.8 366 59.8
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 2.2e-120 436.4 372 58.9
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 1.2e-118 430.6 376 56.4
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 5.9e-118 428.3 367 57.2
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 2.2e-117 426.4 367 57.2
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 2.9e-117 426.0 362 59.4
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 1.9e-116 423.3 258 80.2
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 6.1e-115 418.3 366 57.9
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 8.0e-115 417.9 368 55.7
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 2.3e-114 416.4 363 55.6
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 2.3e-114 416.4 372 57.8
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 5.2e-114 415.2 366 57.4
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 1.5e-113 413.7 362 56.1
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 2.0e-113 413.3 352 59.4
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 2.0e-113 413.3 366 58.7
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 3.3e-113 412.5 368 55.7
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 9.7e-113 411.0 376 55.3
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 1.3e-112 410.6 368 58.7
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 1.7e-112 410.2 362 56.9
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 1.4e-111 407.1 366 54.9
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 1.4e-111 407.1 368 53.3
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 1.8e-111 406.8 367 56.1
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.1e-111 406.0 363 57.0
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 3.1e-111 406.0 341 57.8
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 5.3e-111 405.2 351 58.4
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.6e-110 403.7 371 56.6
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 2.0e-110 403.3 345 58.0
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 3.5e-110 402.5 367 56.4
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 2.9e-109 399.4 368 53.5
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 2.9e-109 399.4 363 55.9
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 2.5e-108 396.4 341 58.1
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 8.0e-107 391.3 364 54.9
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 1.4e-106 390.6 309 62.5
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 1.4e-106 390.6 362 53.9
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 2.3e-106 389.8 366 52.7
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 3.0e-106 389.4 352 56.0
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 8.8e-106 387.9 366 52.2
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 2.0e-105 386.7 366 51.4
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 2.6e-105 386.3 367 51.5
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 2.6e-105 386.3 370 56.8
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 4.4e-105 385.6 366 52.5
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 9.8e-105 384.4 369 52.3
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 1.7e-104 383.6 367 52.6
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.2e-104 383.3 352 53.7
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 1.8e-103 380.2 341 54.8
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 2.4e-103 379.8 369 52.3
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 2.4e-103 379.8 366 51.4
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 5.4e-103 378.6 366 53.0
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 2.7e-102 376.3 369 56.6
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 2.7e-102 376.3 373 49.9
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 4.5e-102 375.6 372 55.6
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 2.2e-101 373.2 370 56.5
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 5.0e-101 372.1 370 57.0
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 1.1e-100 370.9 374 55.3
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 1.9e-100 370.2 372 55.9
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 5.5e-100 368.6 372 55.4
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 9.4e-100 367.9 372 55.9
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 1.4e-98 364.0 388 53.9
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.8e-98 363.6 321 57.6
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 1.5e-97 360.5 372 54.3
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 4.4e-97 359.0 363 51.0
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 1.7e-96 357.1 347 54.2
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 4.9e-96 355.5 358 55.9
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 7.0e-95 351.7 321 55.8
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 9.1e-95 351.3 356 55.1
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 1.3e-93 347.4 368 50.0
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 2.1e-91 340.1 279 63.1
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 2.0e-89 333.6 292 58.9
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 2.6e-89 333.2 351 49.3
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 2.4e-87 326.6 352 49.7
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 9.2e-87 324.7 279 60.6
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 9.2e-87 324.7 375 48.3
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 6.8e-82 308.5 372 46.8
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 1.5e-81 307.4 293 50.9
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 4.4e-81 305.8 272 55.5
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 5.8e-81 305.4 345 49.3
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 8.3e-80 301.6 304 50.7
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 1.6e-78 297.4 262 53.4
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 1.0e-77 294.7 279 55.2
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 2.0e-73 280.4 235 58.7
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 5.4e-71 272.3 277 58.1
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 2.8e-67 260.0 302 49.0
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 1.6e-59 234.2 337 40.1
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 4.0e-58 229.6 171 66.1
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 3.8e-56 223.0 196 55.1
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.7e-53 214.2 282 47.5
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 3.9e-53 213.0 376 36.4
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 1.3e-51 208.0 371 35.8
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 6.2e-51 205.7 355 37.7
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 2.4e-50 203.8 224 49.6
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 2.9e-48 196.8 353 36.3
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.1e-44 184.9 349 35.0
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 2.4e-39 167.2 233 44.6
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 4.6e-38 162.9 230 44.8
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 1.0e-37 161.8 169 47.9
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 1.3e-35 154.8 226 42.0
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 1.5e-28 131.3 196 38.3
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 2.5e-28 130.6 432 28.0
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 2.4e-26 124.0 94 58.5
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.0e-24 118.6 237 40.5
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 5.3e-18 96.3 84 50.0
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 2.0e-17 94.4 71 57.7
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 3.4e-17 93.6 99 49.5
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 1.0e-16 92.0 89 43.8
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 8.5e-16 89.0 68 63.2
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 2.1e-14 84.3 348 25.6
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 2.0e-12 77.8 188 30.9
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 2.0e-12 77.8 172 33.7
HPP92_019693 Vanilla planifolia HOM05D005940 ORTHO05D002769 4.1e-10 70.1 61 55.7
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 5.3e-10 69.7 65 46.2
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.2e-09 68.6 38 76.3
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 8.5e-08 62.4 329 25.2
SMO112G0074 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 5.5e-07 59.7 165 32.1
Cre01.g033763 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 1.2e-06 58.5 58 50.0
CSS0026064 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 2.7e-06 57.4 47 57.4


User provided reference genes

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