Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G076500 Gossypium raimondii HOM05D000002 ORTHO05D004433 1.0e-37 159.5 76 100.0
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-21 105.9 87 58.6
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-21 104.8 86 59.3
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 3.1e-21 104.8 87 59.8
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-21 104.4 87 58.6
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-21 103.6 87 59.8
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-20 102.4 86 58.1
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 1.5e-20 102.4 87 57.5
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 1.5e-20 102.4 86 55.8
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-20 102.1 87 56.3
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-20 102.1 87 57.5
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 2.6e-20 101.7 87 57.5
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 3.4e-20 101.3 87 58.6
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 5.8e-20 100.5 87 57.5
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 9.9e-20 99.8 87 56.3
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-19 99.4 87 55.2
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-19 99.4 87 56.3
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-19 99.4 76 63.2
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-19 97.4 87 52.9
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-19 97.4 87 54.0
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 6.4e-19 97.1 83 56.6
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-19 96.7 86 53.5
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 8.3e-19 96.7 87 56.3
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-18 96.3 86 57.0
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-18 95.5 87 51.7
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-18 95.5 87 51.7
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-18 95.1 87 51.7
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-18 95.1 87 49.4
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 2.4e-18 95.1 87 55.2
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-18 94.4 85 54.1
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-18 94.4 87 51.7
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 5.4e-18 94.0 86 55.8
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 5.4e-18 94.0 87 52.9
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 7.1e-18 93.6 85 54.1
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-18 93.2 86 52.3
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-18 93.2 87 50.6
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-17 92.0 87 50.6
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 3.5e-17 91.3 83 54.2
Prupe.7G032100 Prunus persica HOM05D000002 ORTHO05D004433 7.8e-17 90.1 86 50.0
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-16 86.7 86 47.7
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 1.5e-15 85.9 75 57.3
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.3e-15 84.7 87 50.6
Glyma.07G117100 Glycine max HOM05D000002 ORTHO05D004433 3.6e-14 81.3 84 47.6
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 2.4e-13 78.6 72 55.6
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.0e-13 77.8 77 50.6
Prupe.2G033500 Prunus persica HOM05D000002 ORTHO05D004433 5.2e-13 77.4 74 52.7
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 6.8e-13 77.0 77 50.6
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 6.8e-13 77.0 72 54.2
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 2.0e-12 75.5 109 38.5
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.6e-12 75.1 77 49.4
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.6e-12 75.1 77 49.4
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 3.4e-12 74.7 75 50.7
Dinv02026 Davidia involucrata HOM05D028709 ORTHO05D004433 3.4e-12 74.7 81 46.9
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.8e-11 71.2 76 48.7
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.8e-11 71.2 77 48.1
Nn2g13681 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.4e-11 70.5 63 55.6
Nn1g06847 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.4e-10 69.3 79 41.8
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-10 66.6 60 55.0
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-09 66.2 61 49.2
Sopen09g028980 Solanum pennellii HOM05D000002 ORTHO05D004433 3.5e-09 64.7 78 41.0
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 6.0e-09 63.9 45 62.2
SHI39435 Sapria himalayana HOM05D000002 ORTHO05D004433 7.8e-09 63.5 41 68.3
SHI39437 Sapria himalayana HOM05D000002 ORTHO05D004433 7.8e-09 63.5 41 68.3
SHI47496 Sapria himalayana HOM05D000002 ORTHO05D004433 7.8e-09 63.5 41 68.3
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-09 63.5 63 52.4
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-08 62.4 79 39.2
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 2.3e-08 62.0 59 54.2
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-08 62.0 63 52.4
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.0e-08 61.6 79 39.2
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 3.0e-08 61.6 36 75.0
Sopen11g022850 Solanum pennellii HOM05D000002 ORTHO05D004433 5.1e-08 60.8 75 38.7
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.6e-08 60.5 78 35.9
Nn3g20324 Nelumbo nucifera HOM05D000002 ORTHO05D004433 8.7e-08 60.1 78 37.2
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 8.7e-08 60.1 67 43.3
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-07 59.7 78 37.2
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 1.1e-07 59.7 76 43.4
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.9e-07 58.9 78 35.9
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-07 58.5 60 43.3
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 2.5e-07 58.5 60 48.3
Cpa.g.sc11.103 Carica papaya HOM05D000002 ORTHO05D004433 4.3e-07 57.8 79 36.7
Nn4g24889 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.3e-07 57.8 78 35.9
Nn1g02075 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.6e-07 57.4 77 36.4
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 5.6e-07 57.4 60 50.0
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 5.6e-07 57.4 78 37.2
Oeu001115.1 Olea europaea HOM05D000002 ORTHO05D004433 9.6e-07 56.6 60 50.0
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-06 55.8 56 53.6
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 1.6e-06 55.8 60 50.0
CAN.G401.9 Capsicum annuum HOM05D000002 ORTHO05D004433 2.1e-06 55.5 62 48.4
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.7e-06 54.3 70 35.7


User provided reference genes

Program Settings