Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G034900 Gossypium raimondii HOM05D006783 ORTHO05D008330 5.1e-47 190.7 92 100.0
Gohir.D04G022272 Gossypium hirsutum HOM05D006783 ORTHO05D008330 3.8e-42 174.5 85 98.8
Gohir.D04G022300 Gossypium hirsutum HOM05D006783 ORTHO05D008330 8.2e-37 156.8 81 91.4
Gohir.D04G022400 Gossypium hirsutum HOM05D006783 ORTHO05D008330 3.1e-36 154.8 73 93.2
Gohir.A05G385200 Gossypium hirsutum HOM05D006783 ORTHO05D008330 1.6e-35 152.5 73 91.8
Gorai.012G034600 Gossypium raimondii HOM05D006783 ORTHO05D008330 1.3e-34 149.4 73 91.8
Duzib264G0694 Durio zibethinus HOM05D006783 ORTHO05D008330 4.7e-32 141.0 73 86.3
THA.LOC104808567 Tarenaya hassleriana HOM05D006783 ORTHO05D008330 4.0e-31 137.9 73 78.1
Thecc.01G131600 Theobroma cacao HOM05D006783 ORTHO05D008330 1.2e-30 136.3 73 83.6
BolC8t51838H Brassica oleracea HOM05D006783 ORTHO05D008330 5.7e-30 134.0 73 75.3
Glyma.06G153300 Glycine max HOM05D006783 ORTHO05D008330 5.7e-30 134.0 73 78.1
A09p59540 Brassica napus HOM05D006783 ORTHO05D008330 2.2e-29 132.1 73 74.0
BraA09t41331Z Brassica rapa HOM05D006783 ORTHO05D008330 2.2e-29 132.1 73 74.0
Dinv24358 Davidia involucrata HOM05D006783 ORTHO05D008330 2.2e-29 132.1 73 78.1
BcaB03g14467 Brassica carinata HOM05D006783 ORTHO05D008330 2.8e-29 131.7 73 75.3
Atru.chr4.894 Acer truncatum HOM05D006783 ORTHO05D008330 3.7e-29 131.3 73 76.7
CiPaw.03G122200 Carya illinoinensis HOM05D006783 ORTHO05D008330 3.7e-29 131.3 73 76.7
Cpa.g.sc42.156 Carica papaya HOM05D006783 ORTHO05D008330 4.8e-29 131.0 72 79.2
Ciclev10000624m.g Citrus clementina HOM05D006783 ORTHO05D008330 4.8e-29 131.0 73 76.7
Ah.03g147820 Amaranthus hybridus HOM05D006783 ORTHO05D008330 6.3e-29 130.6 73 76.7
Aqoxy5G02235 Aquilegia oxysepala HOM05D006783 ORTHO05D008330 8.2e-29 130.2 73 78.1
Haze_25231 Corylus avellana HOM05D006783 ORTHO05D008330 8.2e-29 130.2 77 75.3
TPR.G20746 Trifolium pratense HOM05D006783 ORTHO05D008330 8.2e-29 130.2 73 76.7
Thhalv10007278m.g Eutrema salsugineum HOM05D006783 ORTHO05D008330 1.1e-28 129.8 73 72.6
Actinidia06622 Actinidia chinensis HOM05D006783 ORTHO05D008330 1.4e-28 129.4 73 75.3
Eucgr.H04963 Eucalyptus grandis HOM05D006783 ORTHO05D008330 1.4e-28 129.4 73 75.3
Lalb_Chr11g0068431 Lupinus albus HOM05D006783 ORTHO05D008330 1.4e-28 129.4 73 74.0
CANSAT01G2909 Cannabis sativa HOM05D006783 ORTHO05D008330 1.8e-28 129.0 73 76.7
ClCG02G000310 Citrullus lanatus HOM05D006783 ORTHO05D008330 3.1e-28 128.3 73 75.3
Cc07_g18470 Coffea canephora HOM05D006783 ORTHO05D008330 3.1e-28 128.3 73 75.3
TAR381G0047 Trochodendron aralioides HOM05D006783 ORTHO05D008330 3.1e-28 128.3 74 70.3
MELO3C023221.2 Cucumis melo HOM05D006783 ORTHO05D008330 4.1e-28 127.9 73 72.6
CsaV3_2G019520 Cucumis sativus L. HOM05D006783 ORTHO05D008330 4.1e-28 127.9 73 72.6
Lsat_1_v5_gn_2_37361 Lactuca sativa HOM05D006783 ORTHO05D008330 4.1e-28 127.9 73 74.0
Oeu004243.1 Olea europaea HOM05D006783 ORTHO05D008330 4.1e-28 127.9 73 74.0
QL10p043377 Quercus lobata HOM05D006783 ORTHO05D008330 4.1e-28 127.9 73 74.0
GSVIVG01026486001 Vitis vinifera HOM05D006783 ORTHO05D008330 4.1e-28 127.9 73 75.3
HanXRQChr06g0180641 Helianthus annuus HOM05D006783 ORTHO05D008330 5.3e-28 127.5 73 75.3
vmacro12805 Vaccinium macrocarpon HOM05D006783 ORTHO05D008330 5.3e-28 127.5 73 72.6
TAR371G1287 Trochodendron aralioides HOM05D006783 ORTHO05D008330 7.0e-28 127.1 73 71.2
TAR381G1481 Trochodendron aralioides HOM05D006783 ORTHO05D008330 7.0e-28 127.1 73 71.2
Hma1.2p1_0050F.1_g029140 Hydrangea macrophylla HOM05D006783 ORTHO05D008330 1.2e-27 126.3 74 78.4
Rhsim10G0135000 Rhododendron simsii HOM05D006783 ORTHO05D008330 1.2e-27 126.3 75 72.0
BcaC07g41275 Brassica carinata HOM05D006783 ORTHO05D008330 1.6e-27 125.9 73 71.2
C08p42820 Brassica napus HOM05D006783 ORTHO05D008330 1.6e-27 125.9 73 71.2
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 1.6e-27 125.9 74 71.6
TWI79G1521 Tripterygium wilfordii HOM05D006783 ORTHO05D008330 1.6e-27 125.9 73 72.6
Aa31LG7G3800 Aethionema arabicum HOM05D006783 ORTHO05D008330 2.0e-27 125.6 73 72.6
Sp1g16990 Schrenkiella parvula HOM05D006783 ORTHO05D008330 2.0e-27 125.6 73 71.2
Sed0010062 Sechium edule HOM05D006783 ORTHO05D008330 2.0e-27 125.6 73 72.6
MSTRG.2651 Avicennia marina HOM05D006783 ORTHO05D008330 4.5e-27 124.4 73 71.2
FvH4_1g24320 Fragaria vesca HOM05D006783 ORTHO05D008330 4.5e-27 124.4 73 71.2
ECA246G4425 Erigeron canadensis HOM05D006783 ORTHO05D008330 5.9e-27 124.0 70 77.1
arahy.Tifrunner.gnm1.ann1.GA3CQQ Arachis hypogaea HOM05D006783 ORTHO05D008330 7.7e-27 123.6 73 71.2
arahy.Tifrunner.gnm1.ann1.NV8W9T Arachis hypogaea HOM05D006783 ORTHO05D008330 7.7e-27 123.6 73 71.2
PSO170G6811 Papaver somniferum HOM05D006783 ORTHO05D008330 7.7e-27 123.6 73 71.2
Potri.007G106700 Populus trichocarpa HOM05D006783 ORTHO05D008330 7.7e-27 123.6 73 74.0
PSO017G1517 Papaver somniferum HOM05D006783 ORTHO05D008330 1.0e-26 123.2 73 69.9
Hund25583 Selenicereus undatus HOM05D006783 ORTHO05D008330 1.0e-26 123.2 72 75.0
FAN19G0409 Fragaria x ananassa HOM05D006783 ORTHO05D008330 2.2e-26 122.1 73 69.9
Lj1g0010780 Lotus japonicus HOM05D006783 ORTHO05D008330 2.2e-26 122.1 73 71.2
EL10Ac6g15310 Beta vulgaris HOM05D006783 ORTHO05D008330 2.9e-26 121.7 73 74.0
AUR62017874 Chenopodium quinoa HOM05D006783 ORTHO05D008330 2.9e-26 121.7 73 71.2
Medtr3g096240 Medicago truncatula HOM05D006783 ORTHO05D008330 3.8e-26 121.3 73 72.6
RcHm_v2.0_Chr2g0120831 Rosa chinensis HOM05D006783 ORTHO05D008330 3.8e-26 121.3 73 68.5
Sabra07G0087300 Salix brachista HOM05D006783 ORTHO05D008330 3.8e-26 121.3 73 72.6
Migut.H00705 Erythranthe guttata HOM05D006783 ORTHO05D008330 5.0e-26 120.9 73 69.9
CDE06G2516 Ceratophyllum demersum HOM05D006783 ORTHO05D008330 6.5e-26 120.6 73 69.9
AL1G31600 Arabidopsis lyrata HOM05D006783 ORTHO05D008330 8.5e-26 120.2 76 72.4
FAN26G1994 Fragaria x ananassa HOM05D006783 ORTHO05D008330 8.5e-26 120.2 73 69.9
CARHR019650 Cardamine hirsuta HOM05D006783 ORTHO05D008330 1.1e-25 119.8 74 70.3
Psat5g062360 Pisum sativum HOM05D006783 ORTHO05D008330 1.5e-25 119.4 73 71.2
Ca_16945_v3 Cicer arietinum L. HOM05D006783 ORTHO05D008330 1.9e-25 119.0 73 72.6
Lj4A842G81 Lonicera japonica HOM05D006783 ORTHO05D008330 1.9e-25 119.0 73 71.2
SHI11470 Sapria himalayana HOM05D006783 ORTHO05D008330 5.5e-25 117.5 73 68.5
AUR62003560 Chenopodium quinoa HOM05D006783 ORTHO05D008330 2.1e-24 115.5 73 68.5
Nn5g28554 Nelumbo nucifera HOM05D006783 ORTHO05D008330 6.1e-24 114.0 65 72.3
Peaxi162Scf00183g00220 Petunia axillaris HOM05D006783 ORTHO05D008330 8.0e-24 113.6 73 64.4
Carub.0001s1866 Capsella rubella HOM05D006783 ORTHO05D008330 1.0e-23 113.2 76 68.4
Zm00001eb145740 Zea mays HOM05D006783 ORTHO05D008330 1.4e-23 112.8 73 69.9
Os01g0881400 Oryza sativa ssp. japonica HOM05D006783 ORTHO05D008330 1.8e-23 112.5 73 68.5
Manes.12G155400 Manihot esculenta HOM05D006783 ORTHO05D008330 2.3e-23 112.1 70 65.7
AT1G19025 Arabidopsis thaliana HOM05D006783 ORTHO05D008330 4.0e-23 111.3 76 65.8
DCAR_020443 Daucus carota HOM05D006783 ORTHO05D008330 4.0e-23 111.3 73 65.8
Nitab4.5_0000856g0080 Nicotiana tabacum HOM05D006783 ORTHO05D008330 4.0e-23 111.3 73 65.8
Solyc11g006010.3 Solanum lycopersicum HOM05D006783 ORTHO05D008330 6.8e-23 110.5 73 61.6
Sopen11g001950 Solanum pennellii HOM05D006783 ORTHO05D008330 6.8e-23 110.5 73 61.6
CAN.G582.7 Capsicum annuum HOM05D006783 ORTHO05D008330 1.5e-22 109.4 73 61.6
Nitab4.5_0008132g0010 Nicotiana tabacum HOM05D006783 ORTHO05D008330 1.4e-20 102.8 70 62.9
ATR1136G115 Amborella trichopoda HOM05D006783 ORTHO05D008330 7.0e-20 100.5 73 58.9
MBI06_g29674_MAGBIO Magnolia biondii HOM05D006783 ORTHO05D008330 5.9e-19 97.4 73 61.6
SEGI_38469 Sequoiadendron giganteum HOM05D006783 ORTHO05D008330 1.2e-16 89.7 73 50.7
HPP92_013424 Vanilla planifolia HOM05D006783 ORTHO05D008330 2.8e-16 88.6 72 59.7
Pp3c17_21070 Physcomitrium patens HOM05D006783 ORTHO05D008330 3.0e-15 85.1 72 54.2
Zm00001eb174320 Zea mays HOM05D006783 ORTHO05D008330 2.0e-14 82.4 73 53.4
CBR_g9109 Chara braunii HOM05D006783 ORTHO05D008330 9.2e-12 73.6 110 34.5
Psat3g153680 Pisum sativum HOM05D006783 ORTHO05D008330 3.5e-11 71.6 53 58.5
Os08g0107600 Oryza sativa ssp. japonica HOM05D006783 ORTHO05D008330 1.0e-10 70.1 74 51.4
Ca_16964_v3 Cicer arietinum L. HOM05D006783 ORTHO05D008330 6.6e-10 67.4 59 55.9
unitig_0.g1207 Utricularia gibba HOM05D006783 ORTHO05D008330 1.8e-07 59.3 71 45.1


User provided reference genes

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