Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 2.2e-67 258.8 131 100.0
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 9.2e-66 253.4 131 97.7
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 2.0e-65 252.3 131 97.7
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 6.0e-25 117.9 146 58.2
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 2.9e-19 99.0 137 48.9
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 2.1e-17 92.8 124 54.0
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 3.5e-17 92.0 126 50.0
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 3.5e-17 92.0 140 47.1
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 7.9e-17 90.9 132 46.2
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 7.9e-17 90.9 143 46.9
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 8.7e-16 87.4 124 49.2
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.5e-15 86.7 123 45.5
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 5.7e-15 84.7 119 45.4
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 2.1e-14 82.8 135 44.4
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 6.3e-14 81.3 131 49.6
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 8.2e-14 80.9 123 46.3
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 1.4e-13 80.1 132 40.9
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 3.1e-13 79.0 141 43.3
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 5.3e-13 78.2 119 46.2
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 6.9e-13 77.8 130 43.1
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 6.9e-13 77.8 136 41.9
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 9.0e-13 77.4 125 44.8
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 9.0e-13 77.4 132 43.2
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 1.2e-12 77.0 119 47.1
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 2.0e-12 76.3 158 36.7
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 2.6e-12 75.9 140 43.6
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 3.4e-12 75.5 112 48.2
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 4.5e-12 75.1 121 44.6
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 5.9e-12 74.7 131 41.2
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 5.9e-12 74.7 129 46.5
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 1.0e-11 73.9 121 47.1
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 1.0e-11 73.9 119 43.7
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.0e-11 73.9 119 43.7
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 1.3e-11 73.6 134 41.8
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 1.3e-11 73.6 131 43.5
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.7e-11 73.2 121 43.0
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 1.7e-11 73.2 117 47.0
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 1.7e-11 73.2 129 43.4
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 2.2e-11 72.8 109 44.0
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 2.9e-11 72.4 128 43.0
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 3.8e-11 72.0 122 45.9
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 6.5e-11 71.2 126 42.9
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 8.4e-11 70.9 106 50.9
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 8.4e-11 70.9 106 50.9
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 8.4e-11 70.9 117 45.3
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 8.4e-11 70.9 128 43.0
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 8.4e-11 70.9 134 45.5
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 1.4e-10 70.1 111 43.2
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 1.9e-10 69.7 129 41.1
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 2.5e-10 69.3 129 40.3
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 3.2e-10 68.9 128 41.4
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 3.2e-10 68.9 129 43.4
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.2e-10 68.6 122 41.8
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 1.6e-09 66.6 130 39.2
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 1.6e-09 66.6 105 41.0
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 2.1e-09 66.2 117 42.7
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.1e-09 66.2 133 36.1
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 2.7e-09 65.9 117 41.0
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.5e-09 65.5 112 42.9
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.5e-09 65.5 144 34.7
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.0e-08 63.9 112 41.1
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 1.0e-08 63.9 126 39.7
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 3.0e-08 62.4 121 43.0
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.0e-08 62.4 115 38.3
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 6.7e-08 61.2 112 41.1
CiPaw.07G132500 Carya illinoinensis HOM05D007735 ORTHO05D009638 8.7e-08 60.8 119 37.8
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.1e-07 60.5 122 41.0
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.1e-07 60.5 121 39.7
Migut.H02270 Erythranthe guttata HOM05D007735 ORTHO05D009638 2.5e-07 59.3 132 35.6
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 7.4e-07 57.8 118 38.1
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 1.3e-06 57.0 129 34.9
Migut.H02268 Erythranthe guttata HOM05D007735 ORTHO05D009638 3.7e-06 55.5 109 36.7
Atru.chr3.61 Acer truncatum HOM05D007735 ORTHO05D009638 6.3e-06 54.7 60 51.7
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 6.3e-06 54.7 103 37.9


User provided reference genes

Program Settings