Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G007400 Gossypium raimondii HOM05D001200 ORTHO05D010401 8.2e-42 173.3 89 100.0
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 1.2e-40 169.5 89 98.9
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 7.7e-40 166.8 87 98.9
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 7.7e-40 166.8 89 95.5
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.9e-39 164.9 89 96.6
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 1.3e-34 149.4 89 89.9
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 1.7e-34 149.1 89 85.4
GSVIVG01004976001 Vitis vinifera HOM05D001200 ORTHO05D010401 1.7e-34 149.1 89 86.5
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 1.4e-33 146.0 89 84.3
RcHm_v2.0_CPg0502811 Rosa chinensis HOM05D001200 ORTHO05D010401 1.4e-33 146.0 89 84.3
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 85.4
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 85.4
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 85.4
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 85.4
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 85.4
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 85.4
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 85.4
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 85.4
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 9.1e-33 143.3 89 83.1
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 9.1e-33 143.3 89 83.1
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 9.1e-33 143.3 89 83.1
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.6e-32 142.5 86 84.9
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.6e-32 142.5 86 84.9
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 4.5e-32 141.0 89 85.4
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 4.5e-32 141.0 89 85.4
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 4.5e-32 141.0 84 84.5
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 4.5e-32 141.0 88 84.1
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 6.5e-31 137.1 87 83.9
Oeu048498.1 Olea europaea HOM05D001200 ORTHO05D010401 6.5e-31 137.1 81 84.0
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 8.5e-31 136.7 85 85.9
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 1.1e-30 136.3 89 82.0
Ciclev10030459m.g Citrus clementina HOM05D001200 ORTHO05D010401 1.5e-30 136.0 83 84.3
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 2.5e-30 135.2 87 80.5
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 3.2e-30 134.8 79 88.6
Migut.D01255 Erythranthe guttata HOM05D001200 ORTHO05D010401 4.2e-30 134.4 89 79.8
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 2.1e-29 132.1 85 81.2
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 2.1e-29 132.1 85 81.2
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 2.1e-29 132.1 85 81.2
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 2.1e-29 132.1 85 81.2
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 2.1e-29 132.1 85 81.2
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 2.1e-29 132.1 85 81.2
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 2.1e-29 132.1 85 81.2
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 2.1e-29 132.1 89 79.8
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 8.0e-29 130.2 86 77.9
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 8.0e-29 130.2 83 78.3
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 5.2e-28 127.5 85 76.5
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 5.2e-28 127.5 85 76.5
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 5.2e-28 127.5 85 76.5
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 4.4e-27 124.4 85 76.5
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 3.7e-26 121.3 86 75.6
BolSC45t60911H Brassica oleracea HOM05D001200 ORTHO05D010401 4.8e-26 120.9 77 79.2
BraSC25t45908Z Brassica rapa HOM05D001200 ORTHO05D010401 6.3e-26 120.6 78 79.5
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 3.2e-22 108.2 63 90.5
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 1.2e-21 106.3 64 82.8
CAN.G386.25 Capsicum annuum HOM05D001200 ORTHO05D010401 2.1e-21 105.5 66 80.3
Oeu012765.1 Olea europaea HOM05D001200 ORTHO05D002731 2.3e-20 102.1 89 66.3
Hund08792 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund12715 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund12842 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund23967 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund27632 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund27679 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund27756 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund27832 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28331 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28439 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28447 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28537 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28586 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28595 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28849 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28945 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28950 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28955 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28960 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28973 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29027 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29090 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29108 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29180 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29185 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29243 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29248 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29250 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29255 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29262 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29272 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29276 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29280 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29284 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29289 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29317 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29435 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29437 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29452 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29498 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29714 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29756 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29813 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund29817 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund30037 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund30038 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund30121 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund30178 Selenicereus undatus HOM05D001200 ORTHO05D010401 6.8e-20 100.5 80 71.2
Hund28980 Selenicereus undatus HOM05D001200 ORTHO05D010401 3.4e-19 98.2 80 70.0
Solyc01g065620.1 Solanum lycopersicum HOM05D001200 ORTHO05D010401 4.4e-19 97.8 71 71.8
Hund29653 Selenicereus undatus HOM05D001200 ORTHO05D010401 3.7e-18 94.7 80 66.2
C06p42260 Brassica napus HOM05D001200 ORTHO05D010401 4.8e-18 94.4 60 76.7
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 1.1e-17 93.2 89 61.8
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 9.1e-17 90.1 87 60.9
Solyc01g065640.3 Solanum lycopersicum HOM05D001200 ORTHO05D010401 2.8e-13 78.6 62 67.7
Oeu012819.1 Olea europaea HOM05D001200 ORTHO05D002731 8.0e-13 77.0 76 57.9
HanXRQChr08g0211981 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-11 72.0 41 87.8
Potri.008G202133 Populus trichocarpa HOM05D001200 ORTHO05D002731 4.4e-11 71.2 73 56.2
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 2.8e-10 68.6 86 47.7
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 4.9e-10 67.8 57 64.9
HanXRQChr00c0894g0577811 Helianthus annuus HOM05D001200 ORTHO05D002731 6.3e-10 67.4 89 49.4
SMO086G0020 Selaginella moellendorffii HOM05D001200 ORTHO05D002731 1.8e-09 65.9 71 53.5
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 1.2e-08 63.2 64 56.2
CAN.G95.10 Capsicum annuum HOM05D001200 ORTHO05D002731 2.7e-08 62.0 45 68.9
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 7.8e-08 60.5 54 64.8
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 7.8e-08 60.5 35 91.4
Solyc02g011740.1 Solanum lycopersicum HOM05D001200 ORTHO05D010401 1.3e-07 59.7 51 60.8


User provided reference genes

Program Settings