Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.012G000300 Gossypium raimondii HOM05D007641 ORTHO05D007630 0.0e+00 1114.0 535 100.0
Gohir.1Z049434 Gossypium hirsutum HOM05D007641 ORTHO05D007630 8.1e-286 986.5 529 91.5
Gorai.004G000600 Gossypium raimondii HOM05D007641 ORTHO05D007630 5.3e-277 957.2 531 88.5
Gohir.D08G007350 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.2e-276 956.1 526 89.2
Gohir.1Z049529 Gossypium hirsutum HOM05D007641 ORTHO05D007630 8.4e-275 949.9 454 100.0
Gohir.D12G000401 Gossypium hirsutum HOM05D007641 ORTHO05D007630 5.9e-260 900.6 534 84.6
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 2.5e-242 842.0 534 80.0
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 1.1e-173 614.0 544 60.1
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 1.9e-141 506.9 542 53.9
COL.COLO4_11217 Corchorus olitorius HOM05D007641 ORTHO05D007630 4.1e-128 462.6 553 47.9
Gorai.002G193100 Gossypium raimondii HOM05D007641 ORTHO05D007630 1.4e-99 367.9 233 79.8
Gohir.D01G155850 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.7e-86 324.3 208 79.8
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 4.3e-77 293.1 556 38.3
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 2.9e-73 280.4 561 37.1
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 1.4e-72 278.1 559 37.9
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 2.6e-66 257.3 550 34.7
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 2.3e-62 244.2 521 34.4
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 3.4e-58 230.3 549 34.6
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 2.4e-56 224.2 563 32.7
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 1.2e-55 221.9 550 32.4
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla HOM05D007641 ORTHO05D007630 2.1e-52 211.1 510 34.1
TWI79G1607 Tripterygium wilfordii HOM05D007641 ORTHO05D007630 6.9e-51 206.1 521 30.5
Gohir.D01G148301 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.4e-43 181.8 88 96.6
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 4.0e-43 180.3 506 30.4
Gorai.002G184200 Gossypium raimondii HOM05D007641 ORTHO05D007630 4.5e-42 176.8 88 93.2
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 6.4e-41 172.9 431 31.3
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 2.1e-39 167.9 553 28.8
Manes.02G212232 Manihot esculenta HOM05D007641 ORTHO05D007630 6.0e-39 166.4 518 30.1
TAR633G1590 Trochodendron aralioides HOM05D007641 ORTHO05D007630 8.2e-36 156.0 318 35.2
Aqoxy1G01263 Aquilegia oxysepala HOM05D007641 ORTHO05D007630 2.0e-34 151.4 517 30.0
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 9.3e-32 142.5 559 29.5
Gohir.A05G417101 Gossypium hirsutum HOM05D007641 ORTHO05D007630 9.7e-29 132.5 63 100.0
Ciclev10001550m.g Citrus clementina HOM05D007641 ORTHO05D007630 1.6e-28 131.7 350 32.0
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 8.2e-28 129.4 556 27.3
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 1.3e-25 122.1 461 28.4
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 2.2e-25 121.3 424 29.0
FAN16G1217 Fragaria x ananassa HOM05D007641 ORTHO05D007630 2.2e-25 121.3 424 28.8
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 3.8e-25 120.6 549 27.5
ClCG02G019020 Citrullus lanatus HOM05D007641 ORTHO05D007630 3.6e-23 114.0 546 26.4
CANSAT54G2173 Cannabis sativa HOM05D007641 ORTHO05D007630 3.0e-22 110.9 545 26.1
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 5.1e-22 110.2 543 26.3
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 8.8e-22 109.4 552 25.9
MELO3C019578.2 Cucumis melo HOM05D007641 ORTHO05D007630 5.7e-21 106.7 451 27.5
arahy.Tifrunner.gnm1.ann1.F8RHVN Arachis hypogaea HOM05D007641 ORTHO05D007630 7.4e-21 106.3 551 25.8
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 2.2e-20 104.8 548 26.1
Sed0007856 Sechium edule HOM05D007641 ORTHO05D007630 1.8e-19 101.7 548 25.4
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 1.2e-18 99.0 488 26.8
Lj2A1102G26 Lonicera japonica HOM05D007641 ORTHO05D007630 8.5e-17 92.8 332 30.7
MD11G1053300 Malus domestica HOM05D007641 ORTHO05D007630 1.6e-15 88.6 264 31.8
Ca_15060_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 4.7e-15 87.0 502 25.9
Thhalv10017756m.g Eutrema salsugineum HOM05D001940 ORTHO05D007630 2.0e-13 81.6 327 27.5
AL4G25360 Arabidopsis lyrata HOM05D001940 ORTHO05D007630 2.6e-13 81.3 368 28.8
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 9.7e-13 79.3 575 23.8
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 9.7e-13 79.3 343 29.4
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 2.2e-12 78.2 388 27.6
Sc23g0005090 Simmondsia chinensis HOM05D007641 ORTHO05D007630 2.4e-11 74.7 325 26.8
Oeu064683.1 Olea europaea HOM05D007641 ORTHO05D007630 3.1e-11 74.3 572 25.7
Carub.0004s1164 Capsella rubella HOM05D001940 ORTHO05D007630 1.2e-10 72.4 342 29.5
FAN21G1070 Fragaria x ananassa HOM05D007641 ORTHO05D007630 1.5e-10 72.0 236 30.5
THA.LOC104815825 Tarenaya hassleriana HOM05D001940 ORTHO05D007630 3.5e-10 70.9 312 29.8
AT2G30480 Arabidopsis thaliana HOM05D001940 ORTHO05D007630 7.7e-10 69.7 326 28.2
Sp4g13010 Schrenkiella parvula HOM05D001940 ORTHO05D007630 7.7e-10 69.7 334 27.2
GSVIVG01024556001 Vitis vinifera HOM05D007641 ORTHO05D007630 1.0e-09 69.3 109 36.7
CsaV3_6G013130 Cucumis sativus L. HOM05D007641 ORTHO05D007630 1.7e-09 68.6 220 29.1
Cpa.g.sc2.294 Carica papaya HOM05D007641 ORTHO05D007630 5.0e-09 67.0 125 32.0
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 4.7e-07 60.5 557 22.3
MD11G1053200 Malus domestica HOM05D007641 ORTHO05D007630 6.1e-07 60.1 123 38.2


User provided reference genes

Program Settings