Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.011G260100 Gossypium raimondii HOM05D004531 ORTHO05D005484 4.6e-121 438.0 230 100.0
Gohir.D10G227700 Gossypium hirsutum HOM05D004531 ORTHO05D005484 2.9e-115 418.7 230 96.5
Gohir.A06G180300 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.4e-114 416.4 230 96.5
Duzib248G1029 Durio zibethinus HOM05D004531 ORTHO05D005484 4.8e-110 401.4 230 91.3
Thecc.05G127100 Theobroma cacao HOM05D004531 ORTHO05D005484 4.1e-109 398.3 230 90.0
PGR042G0151 Punica granatum HOM05D004531 ORTHO05D005484 8.2e-102 374.0 230 83.0
COL.COLO4_07074 Corchorus olitorius HOM05D004531 ORTHO05D005484 5.3e-101 371.3 230 85.2
Gohir.A08G129500 Gossypium hirsutum HOM05D004531 ORTHO05D005484 7.7e-100 367.5 230 87.4
Prupe.8G106900 Prunus persica HOM05D004531 ORTHO05D005484 5.0e-99 364.8 230 82.2
Eucgr.A02172 Eucalyptus grandis HOM05D004531 ORTHO05D005484 6.5e-99 364.4 230 81.3
Prupe.4G200900 Prunus persica HOM05D004531 ORTHO05D005484 8.5e-99 364.0 230 82.2
Dinv37065 Davidia involucrata HOM05D004531 ORTHO05D005484 1.4e-98 363.2 230 81.7
CSS0023033 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 3.2e-98 362.1 230 80.9
GSVIVG01029836001 Vitis vinifera HOM05D004531 ORTHO05D005484 7.2e-98 360.9 230 79.6
Manes.11G057800 Manihot esculenta HOM05D004531 ORTHO05D005484 9.4e-98 360.5 230 80.4
Ciclev10012657m.g Citrus clementina HOM05D004531 ORTHO05D005484 4.7e-97 358.2 230 79.1
Atru.chr2.471 Acer truncatum HOM05D004531 ORTHO05D005484 1.4e-96 356.7 230 80.0
Potri.016G024300 Populus trichocarpa HOM05D004531 ORTHO05D005484 6.7e-96 354.4 230 77.8
CANSAT56G3883 Cannabis sativa HOM05D004531 ORTHO05D005484 7.4e-95 350.9 230 78.7
Ciclev10010418m.g Citrus clementina HOM05D004531 ORTHO05D005484 9.7e-95 350.5 230 78.3
Cc06_g18540 Coffea canephora HOM05D004531 ORTHO05D005484 1.7e-94 349.7 230 77.4
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla HOM05D004531 ORTHO05D005484 1.7e-94 349.7 230 78.3
Lalb_Chr13g0291551 Lupinus albus HOM05D004531 ORTHO05D005484 1.7e-94 349.7 230 78.3
Sabra16G0021800 Salix brachista HOM05D004531 ORTHO05D005484 1.7e-94 349.7 230 77.0
Lj7A661T48 Lonicera japonica HOM05D004531 ORTHO05D005484 6.3e-94 347.8 230 77.8
TWI77G0822 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 6.3e-94 347.8 230 78.3
Glyma.08G077300 Glycine max HOM05D004531 ORTHO05D005484 3.1e-93 345.5 230 75.7
CAN.G641.37 Capsicum annuum HOM05D004531 ORTHO05D005484 4.5e-92 341.7 230 77.8
MD11G1228700 Malus domestica HOM05D004531 ORTHO05D005484 7.7e-92 340.9 229 78.2
CiPaw.08G117500 Carya illinoinensis HOM05D004531 ORTHO05D005484 1.7e-91 339.7 230 76.1
PGSC0003DMG400008162 Solanum tuberosum HOM05D004531 ORTHO05D005484 1.7e-91 339.7 230 77.0
MBI13_g30229_MAGBIO Magnolia biondii HOM05D004531 ORTHO05D005484 2.9e-91 339.0 239 72.0
RcHm_v2.0_Chr5g0037141 Rosa chinensis HOM05D004531 ORTHO05D005484 3.8e-91 338.6 230 75.2
Glyma.05G122300 Glycine max HOM05D004531 ORTHO05D005484 5.0e-91 338.2 230 76.1
Nitab4.5_0000646g0260 Nicotiana tabacum HOM05D004531 ORTHO05D005484 5.0e-91 338.2 230 77.0
Nn5g28465 Nelumbo nucifera HOM05D004531 ORTHO05D005484 6.5e-91 337.8 230 74.3
VMungo0251G1523 Vigna mungo HOM05D004531 ORTHO05D005484 6.5e-91 337.8 230 74.8
Sed0018245 Sechium edule HOM05D004531 ORTHO05D005484 8.5e-91 337.4 230 75.2
SalBow6G4182 Salvia bowleyana HOM05D004531 ORTHO05D005484 1.1e-90 337.0 230 75.2
MD15G1425000 Malus domestica HOM05D004531 ORTHO05D005484 1.4e-90 336.7 230 77.4
MELO3C008757.2 Cucumis melo HOM05D004531 ORTHO05D005484 1.9e-90 336.3 230 75.7
Phvul.002G203400 Phaseolus vulgaris HOM05D004531 ORTHO05D005484 2.5e-90 335.9 230 74.3
Solyc10g079430.2 Solanum lycopersicum HOM05D004531 ORTHO05D005484 4.2e-90 335.1 230 76.1
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea HOM05D004531 ORTHO05D005484 7.2e-90 334.3 232 75.9
CsaV3_2G009570 Cucumis sativus L. HOM05D004531 ORTHO05D005484 7.2e-90 334.3 230 75.7
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea HOM05D004531 ORTHO05D005484 9.4e-90 334.0 232 75.9
Migut.J01686 Erythranthe guttata HOM05D004531 ORTHO05D005484 1.2e-89 333.6 232 73.7
ClCG11G010890 Citrullus lanatus HOM05D004531 ORTHO05D005484 2.7e-89 332.4 230 75.2
FvH4_3g21660 Fragaria vesca HOM05D004531 ORTHO05D005484 4.7e-89 331.6 230 73.5
Nitab4.5_0000082g0350 Nicotiana tabacum HOM05D004531 ORTHO05D005484 4.7e-89 331.6 230 75.2
TAR374G0360 Trochodendron aralioides HOM05D004531 ORTHO05D005484 4.7e-89 331.6 230 75.2
vmacro07599 Vaccinium macrocarpon HOM05D004531 ORTHO05D005484 4.7e-89 331.6 230 73.0
Sc15g0002670 Simmondsia chinensis HOM05D004531 ORTHO05D005484 6.1e-89 331.3 230 73.9
Lj6g0006960 Lotus japonicus HOM05D004531 ORTHO05D005484 1.4e-88 330.1 230 75.2
Ca_18320_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 2.3e-88 329.3 230 71.7
EL10Ac1g01672 Beta vulgaris HOM05D004531 ORTHO05D005484 3.0e-88 328.9 230 72.6
Nitab4.5_0010736g0010 Nicotiana tabacum HOM05D004531 ORTHO05D005484 3.0e-88 328.9 230 75.7
EL10Ac9g22646 Beta vulgaris HOM05D004531 ORTHO05D005484 6.7e-88 327.8 230 72.2
Cpa.g.sc115.24 Carica papaya HOM05D004531 ORTHO05D005484 8.8e-88 327.4 230 73.9
Sabra16G0030200 Salix brachista HOM05D004531 ORTHO05D005484 8.8e-88 327.4 220 75.0
MD11G1228500 Malus domestica HOM05D004531 ORTHO05D005484 1.1e-87 327.0 250 71.2
DCAR_020613 Daucus carota HOM05D004531 ORTHO05D005484 2.0e-87 326.2 230 73.9
ECA238G4589 Erigeron canadensis HOM05D004531 ORTHO05D005484 2.0e-87 326.2 230 72.2
SGA_v2.0_scaffold69G23138 Striga asiatica HOM05D004531 ORTHO05D005484 2.2e-86 322.8 232 71.6
MSTRG.6389 Avicennia marina HOM05D004531 ORTHO05D005484 2.8e-86 322.4 230 71.7
RhsimUnG0021500 Rhododendron simsii HOM05D004531 ORTHO05D005484 2.8e-86 322.4 254 67.3
HanXRQChr14g0437741 Helianthus annuus HOM05D004531 ORTHO05D005484 3.7e-86 322.0 230 70.9
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea HOM05D004531 ORTHO05D005484 6.3e-86 321.2 232 74.1
FAN11G1137 Fragaria x ananassa HOM05D004531 ORTHO05D005484 3.1e-85 318.9 252 67.1
Aqoxy2G03324 Aquilegia oxysepala HOM05D004531 ORTHO05D005484 4.1e-85 318.5 230 69.6
Os01g0810000 Oryza sativa ssp. japonica HOM05D004531 ORTHO05D005484 5.3e-85 318.2 230 69.1
AUR62034356 Chenopodium quinoa HOM05D004531 ORTHO05D005484 9.1e-85 317.4 230 70.4
Medtr4g094380 Medicago truncatula HOM05D004531 ORTHO05D005484 1.2e-84 317.0 230 69.6
AUR62022353 Chenopodium quinoa HOM05D004531 ORTHO05D005484 1.6e-84 316.6 230 70.9
TPR.G23804 Trifolium pratense HOM05D004531 ORTHO05D005484 1.3e-83 313.5 231 70.6
Haze_23723 Corylus avellana HOM05D004531 ORTHO05D005484 2.9e-83 312.4 307 59.6
THA.LOC104820245 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 3.8e-83 312.0 232 70.3
Peaxi162Scf00002g10416 Petunia axillaris HOM05D004531 ORTHO05D005484 9.4e-82 307.4 263 64.3
Lsat_1_v5_gn_2_52561 Lactuca sativa HOM05D004531 ORTHO05D005484 3.6e-81 305.4 220 70.5
HPP92_027481 Vanilla planifolia HOM05D004531 ORTHO05D005484 1.4e-80 303.5 230 70.0
Psat7g095600 Pisum sativum HOM05D004531 ORTHO05D005484 4.0e-80 302.0 230 67.4
PSO210G4508 Papaver somniferum HOM05D004531 ORTHO05D005484 1.2e-79 300.4 230 68.3
PSO210G2223 Papaver somniferum HOM05D004531 ORTHO05D005484 7.5e-79 297.7 230 67.8
unitig_746.g26802 Utricularia gibba HOM05D004531 ORTHO05D005484 1.7e-78 296.6 230 66.1
QL09p051267 Quercus lobata HOM05D004531 ORTHO05D005484 4.8e-78 295.0 361 50.4
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 2.4e-77 292.7 231 65.8
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 2.4e-77 292.7 230 65.7
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 2.4e-77 292.7 230 65.7
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 3.1e-77 292.4 230 64.3
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 9.1e-77 290.8 230 64.3
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 1.2e-76 290.4 231 65.4
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 1.2e-76 290.4 230 64.8
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 1.2e-76 290.4 230 64.3
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 2.0e-76 289.7 230 64.3
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 2.0e-76 289.7 230 64.3
C08p35370 Brassica napus HOM05D004531 ORTHO05D005484 3.5e-76 288.9 230 63.9
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 5.9e-76 288.1 230 64.3
Duzib052G0496 Durio zibethinus HOM05D004531 ORTHO05D005484 5.9e-76 288.1 166 89.2
AL5G42600 Arabidopsis lyrata HOM05D004531 ORTHO05D005484 2.2e-75 286.2 230 64.8
Carub.0005s2711 Capsella rubella HOM05D004531 ORTHO05D005484 2.2e-75 286.2 230 64.3
MELO3C023654.2 Cucumis melo HOM05D004531 ORTHO05D005484 3.8e-75 285.4 236 65.3
Thhalv10006222m.g Eutrema salsugineum HOM05D004531 ORTHO05D005484 6.5e-75 284.6 230 63.5
ClCG09G010350 Citrullus lanatus HOM05D004531 ORTHO05D005484 1.1e-74 283.9 220 67.3
CARHR170680 Cardamine hirsuta HOM05D004531 ORTHO05D005484 2.5e-74 282.7 230 62.6
AT3G60360 Arabidopsis thaliana HOM05D004531 ORTHO05D005484 1.6e-73 280.0 230 63.0
RhsimUnG0117400 Rhododendron simsii HOM05D004531 ORTHO05D005484 2.7e-73 279.3 318 52.2
SGA_v2.0_scaffold105G30334 Striga asiatica HOM05D004531 ORTHO05D005484 8.8e-72 274.2 199 68.8
TAR636G0629 Trochodendron aralioides HOM05D004531 ORTHO05D005484 7.0e-69 264.6 182 74.2
CsaV3_7G024290 Cucumis sativus L. HOM05D004531 ORTHO05D005484 1.2e-68 263.8 230 63.0
Zm00001eb369240 Zea mays HOM05D004531 ORTHO05D005484 4.5e-68 261.9 213 62.4
SMO367G0994 Selaginella moellendorffii HOM05D004531 ORTHO05D005484 4.7e-65 251.9 230 54.8
CDE07G2032 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 1.0e-64 250.8 177 71.2
Cfa002196 Carpinus fangiana HOM05D004531 ORTHO05D005484 1.5e-58 230.3 140 84.3
Mapoly0074s0052 Marchantia polymorpha HOM05D004531 ORTHO05D005484 4.3e-58 228.8 230 53.9
Nitab4.5_0002805g0150 Nicotiana tabacum HOM05D004531 ORTHO05D005484 5.6e-58 228.4 164 73.2
Sopen10g030070 Solanum pennellii HOM05D004531 ORTHO05D005484 5.6e-58 228.4 164 73.2
AagrBONN_evm.TU.Sc2ySwM_228.1021 Anthoceros agrestis HOM05D004531 ORTHO05D005484 4.7e-57 225.3 231 54.1
Hund15691 Selenicereus undatus HOM05D004531 ORTHO05D005484 4.4e-55 218.8 141 78.0
FAN16G0044 Fragaria x ananassa HOM05D004531 ORTHO05D005484 3.7e-54 215.7 164 68.9
Ah.13g077510 Amaranthus hybridus HOM05D004531 ORTHO05D005484 2.4e-53 213.0 229 54.1
Hund22289 Selenicereus undatus HOM05D004531 ORTHO05D005484 1.2e-52 210.7 282 48.2
ATR1096G053 Amborella trichopoda HOM05D004531 ORTHO05D005484 3.3e-50 202.6 138 70.3
FAN21G3808 Fragaria x ananassa HOM05D004531 ORTHO05D005484 3.3e-50 202.6 149 69.8
Pp3c3_27620 Physcomitrium patens HOM05D004531 ORTHO05D005484 1.2e-49 200.7 234 48.3
Dinv14546 Davidia involucrata HOM05D004531 ORTHO05D005484 4.0e-48 195.7 117 83.8
Oeu020249.1 Olea europaea HOM05D004531 ORTHO05D005484 3.5e-44 182.6 111 82.0
CBR_g26482 Chara braunii HOM05D004531 ORTHO05D005484 1.1e-42 177.6 245 44.9
MCO16G699 Micromonas commoda HOM05D004531 ORTHO05D005484 2.5e-42 176.4 244 45.9
Carub.0007s2695 Capsella rubella HOM05D004531 ORTHO05D005484 3.6e-41 172.6 179 52.0
CDE07G0548 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 1.5e-39 167.2 139 60.4
BraA04t15890Z Brassica rapa HOM05D004531 ORTHO05D005484 1.1e-37 161.0 140 63.6
PRCOL_00003072 Prasinoderma coloniale HOM05D004531 ORTHO05D005484 5.4e-37 158.7 266 39.5
Pp3s222_10 Physcomitrium patens HOM05D004531 ORTHO05D005484 1.2e-36 157.5 160 52.5
Ca_08745_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 1.0e-35 154.5 218 44.5
Cre13.g573050 Chlamydomonas reinhardtii HOM05D004531 ORTHO05D005484 2.3e-35 153.3 292 38.4
FAN25G0149 Fragaria x ananassa HOM05D004531 ORTHO05D005484 3.9e-35 152.5 118 66.1
Potri.006G026002 Populus trichocarpa HOM05D004531 ORTHO05D005484 4.9e-30 135.6 110 63.6
MD11G1228400 Malus domestica HOM05D004531 ORTHO05D005484 1.7e-27 127.1 124 59.7
Psat3g051800 Pisum sativum HOM05D004531 ORTHO05D005484 1.1e-24 117.9 111 56.8
CSS0027948 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 5.8e-23 112.1 97 61.9
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.4e-21 107.5 79 62.0
CDE07G1261 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 3.3e-18 96.3 65 69.2
Zm00001eb262530 Zea mays HOM05D000031 ORTHO05D445172 4.3e-18 95.9 71 59.2
TWI38G0613 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 1.3e-17 94.4 106 53.8
Gohir.A06G180400 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.1e-16 91.3 54 88.9
Cfa023089 Carpinus fangiana HOM05D004531 ORTHO05D005484 4.0e-16 89.4 137 42.3
Zm00001eb180730 Zea mays HOM05D004531 ORTHO05D005484 6.9e-16 88.6 63 61.9
PSO210G0815 Papaver somniferum HOM05D004531 ORTHO05D005484 1.5e-15 87.4 80 60.0
ATR1096G046 Amborella trichopoda HOM05D004531 ORTHO05D005484 1.7e-14 84.0 65 64.6
Haze_26248 Corylus avellana HOM05D004531 ORTHO05D005484 6.4e-14 82.0 116 41.4
ECA238G1549 Erigeron canadensis HOM05D004531 ORTHO05D005484 2.4e-13 80.1 58 65.5
SalBow8G3341 Salvia bowleyana HOM05D004531 ORTHO05D005484 3.2e-13 79.7 69 59.4
Oeu059360.1 Olea europaea HOM05D004531 ORTHO05D005484 4.3e-10 69.3 96 39.6
TAR633G0556 Trochodendron aralioides HOM05D004531 ORTHO05D005484 7.4e-10 68.6 38 81.6
Oeu059364.1 Olea europaea HOM05D004531 ORTHO05D290784 1.3e-09 67.8 61 50.8
MD03G1213700 Malus domestica HOM05D004531 ORTHO05D005484 1.5e-07 60.8 47 68.1
Oeu059357.1 Olea europaea HOM05D004531 ORTHO05D005484 2.0e-07 60.5 41 65.9
Gohir.A12G148851 Gossypium hirsutum HOM05D004531 ORTHO05D005484 4.5e-07 59.3 62 59.7
PSO210G7246 Papaver somniferum HOM05D000014 ORTHO05D000016 1.3e-06 57.8 40 70.0


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