Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.011G223800 Gossypium raimondii HOM05D005193 ORTHO05D006316 1.5e-92 342.8 176 100.0
Gohir.D10G199632 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.0e-72 276.9 145 97.9
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.1e-61 240.4 165 77.6
Gorai.001G274400 Gossypium raimondii HOM05D005193 ORTHO05D006316 1.1e-61 240.4 132 93.2
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 7.0e-61 237.7 165 77.0
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.6e-60 236.5 165 75.8
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 6.4e-54 214.5 166 68.7
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 5.9e-52 208.0 165 66.1
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 1.9e-50 203.0 166 66.9
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 2.3e-43 179.5 164 56.1
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 6.6e-43 177.9 166 60.2
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 2.1e-41 172.9 164 54.3
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 4.7e-41 171.8 166 53.6
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 8.1e-41 171.0 164 54.9
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 6.8e-40 167.9 173 52.6
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 1.2e-39 167.2 124 66.1
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 2.6e-39 166.0 171 53.8
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 1.3e-38 163.7 166 57.2
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 4.9e-38 161.8 165 53.9
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 4.9e-38 161.8 164 52.4
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 6.4e-38 161.4 165 55.8
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 6.4e-38 161.4 159 56.6
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 1.4e-37 160.2 167 49.1
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.9e-37 159.8 167 50.3
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 1.9e-37 159.8 167 51.5
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 1.9e-37 159.8 167 51.5
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 1.9e-37 159.8 167 51.5
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 2.4e-37 159.5 169 49.7
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 3.2e-37 159.1 164 48.2
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 4.1e-37 158.7 169 49.7
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 4.1e-37 158.7 171 48.5
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 4.1e-37 158.7 169 50.9
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 5.4e-37 158.3 171 53.8
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 5.4e-37 158.3 167 53.9
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 9.2e-37 157.5 168 48.8
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 9.2e-37 157.5 166 52.4
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 9.2e-37 157.5 166 50.6
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 1.2e-36 157.1 166 49.4
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 1.6e-36 156.8 166 49.4
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 4.6e-36 155.2 164 48.2
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 7.8e-36 154.5 169 47.9
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 7.8e-36 154.5 164 53.0
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 2.3e-35 152.9 164 50.0
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 3.0e-35 152.5 164 50.6
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 3.0e-35 152.5 176 50.0
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 3.0e-35 152.5 166 51.8
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 5.1e-35 151.8 168 47.6
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 6.6e-35 151.4 169 48.5
Gohir.D08G017066 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.1e-34 150.6 77 96.1
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 1.5e-34 150.2 172 52.3
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 1.5e-34 150.2 164 48.8
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 1.9e-34 149.8 153 50.3
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 1.9e-34 149.8 164 50.6
Lj1C877G15 Lonicera japonica HOM05D005193 ORTHO05D006316 2.5e-34 149.4 133 57.9
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 3.3e-34 149.1 168 47.0
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 3.3e-34 149.1 168 50.6
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 4.3e-34 148.7 168 47.6
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 5.6e-34 148.3 168 47.0
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 7.3e-34 147.9 169 47.3
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 9.5e-34 147.5 168 47.6
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 1.6e-33 146.7 168 49.4
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 4.7e-33 145.2 141 48.9
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 8.1e-33 144.4 164 49.4
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 8.1e-33 144.4 169 49.7
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 1.1e-32 144.1 165 46.1
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 1.1e-32 144.1 169 48.5
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.1e-32 144.1 169 48.5
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 1.4e-32 143.7 164 47.6
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 1.8e-32 143.3 164 47.0
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 2.4e-32 142.9 124 55.6
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 3.1e-32 142.5 166 49.4
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 4.0e-32 142.1 164 46.3
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 4.0e-32 142.1 169 47.9
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 5.2e-32 141.7 230 40.9
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 8.9e-32 141.0 169 47.9
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.0e-31 139.8 169 48.5
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.3e-30 137.1 169 46.7
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 4.9e-30 135.2 168 42.9
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 1.1e-29 134.0 164 46.3
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 9.2e-29 131.0 164 45.7
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 1.2e-28 130.6 164 45.7
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 1.2e-28 130.6 157 41.4
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 1.6e-28 130.2 124 51.6
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 4.6e-28 128.6 164 43.3
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 5.1e-27 125.2 168 41.7
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 4.3e-26 122.1 168 40.5
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 9.9e-23 110.9 124 47.6
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 1.3e-19 100.5 165 34.5
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 1.1e-18 97.4 170 34.1
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 3.6e-17 92.4 172 33.7
CAN.G1219.3 Capsicum annuum HOM05D005193 ORTHO05D006316 3.8e-14 82.4 116 37.9
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 6.4e-14 81.6 169 33.7
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 5.4e-13 78.6 122 38.5
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 3.5e-12 75.9 107 44.9
AagrBONN_evm.TU.Sc2ySwM_344.2169 Anthoceros agrestis HOM05D005193 ORTHO05D006316 2.3e-11 73.2 100 39.0
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 5.6e-10 68.6 77 44.2


User provided reference genes

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