Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.011G098500 Gossypium raimondii HOM05D008224 ORTHO05D010083 2.0e-62 242.3 123 100.0
Gohir.D10G089800 Gossypium hirsutum HOM05D008224 ORTHO05D010083 5.8e-62 240.7 123 99.2
Gohir.A10G098400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 3.2e-60 235.0 123 96.7
Thecc.01G019300 Theobroma cacao HOM05D008224 ORTHO05D010083 9.3e-36 153.7 125 71.2
COL.COLO4_21914 Corchorus olitorius HOM05D008224 ORTHO05D010083 9.0e-31 137.1 114 69.3
Gohir.A11G175668 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.9e-28 129.4 123 62.6
Gohir.D11G183450 Gossypium hirsutum HOM05D008224 ORTHO05D010083 2.5e-28 129.0 123 61.8
Gorai.007G195300 Gossypium raimondii HOM05D008224 ORTHO05D010083 3.0e-26 122.1 124 59.7
Atru.chr4.381 Acer truncatum HOM05D008224 ORTHO05D010083 7.4e-25 117.5 129 55.8
Gorai.003G009900 Gossypium raimondii HOM05D008224 ORTHO05D010083 5.3e-23 111.3 112 56.2
QL12p007153 Quercus lobata HOM05D008224 ORTHO05D010083 8.5e-21 104.0 115 57.4
QL06p032684 Quercus lobata HOM05D008224 ORTHO05D010083 1.1e-20 103.6 115 56.5
Haze_03767 Corylus avellana HOM05D008224 ORTHO05D010083 1.9e-20 102.8 133 51.9
Medtr5g021840 Medicago truncatula HOM05D008224 ORTHO05D010083 4.2e-20 101.7 110 58.2
Lj4P218T44 Lonicera japonica HOM05D008224 ORTHO05D010083 1.2e-19 100.1 122 52.5
CiPaw.08G131800 Carya illinoinensis HOM05D008224 ORTHO05D010083 1.6e-19 99.8 110 57.3
Potri.005G114500 Populus trichocarpa HOM05D008224 ORTHO05D010083 2.1e-19 99.4 124 54.8
Sabra05G0093700 Salix brachista HOM05D008224 ORTHO05D010083 6.1e-19 97.8 129 54.3
Sopen02g028710 Solanum pennellii HOM05D008224 ORTHO05D010083 1.0e-18 97.1 107 53.3
Hma1.2p1_0258F.1_g104170 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 2.3e-18 95.9 78 64.1
Solyc02g083930.1 Solanum lycopersicum HOM05D008224 ORTHO05D010083 2.3e-18 95.9 107 53.3
Peaxi162Scf00083g00052 Petunia axillaris HOM05D008224 ORTHO05D010083 3.0e-18 95.5 120 46.7
Prupe.7G167900 Prunus persica HOM05D008224 ORTHO05D010083 3.9e-18 95.1 104 58.7
TAR381G1028 Trochodendron aralioides HOM05D008224 ORTHO05D010083 8.8e-18 94.0 125 50.4
Ciclev10027456m.g Citrus clementina HOM05D008224 ORTHO05D010083 1.9e-17 92.8 133 49.6
Manes.02G104200 Manihot esculenta HOM05D008224 ORTHO05D010083 5.7e-17 91.3 97 56.7
TAR625G0799 Trochodendron aralioides HOM05D008224 ORTHO05D010083 7.4e-17 90.9 103 52.4
Ca_25829_v3 Cicer arietinum L. HOM05D008224 ORTHO05D010083 2.8e-16 89.0 110 52.7
Lalb_Chr09g0321801 Lupinus albus HOM05D008224 ORTHO05D010083 2.8e-16 89.0 103 52.4
Phvul.002G109500 Phaseolus vulgaris HOM05D008224 ORTHO05D010083 2.8e-16 89.0 86 59.3
Psat2g155040 Pisum sativum HOM05D008224 ORTHO05D010083 2.8e-16 89.0 112 54.5
PGSC0003DMG400003638 Solanum tuberosum HOM05D008224 ORTHO05D010083 3.7e-16 88.6 104 51.0
Aqoxy5G01777 Aquilegia oxysepala HOM05D008224 ORTHO05D010083 1.1e-15 87.0 127 47.2
Gohir.D03G009600 Gossypium hirsutum HOM05D008224 ORTHO05D010083 2.4e-15 85.9 92 59.8
Nitab4.5_0003271g0030 Nicotiana tabacum HOM05D008224 ORTHO05D010083 2.4e-15 85.9 113 46.9
CSS0002084 Camellia sinensis var. sinensis HOM05D008224 ORTHO05D010083 3.1e-15 85.5 133 47.4
Nitab4.5_0006286g0060 Nicotiana tabacum HOM05D008224 ORTHO05D010083 6.9e-15 84.3 113 46.9
Glyma.01G166900 Glycine max HOM05D008224 ORTHO05D010083 1.2e-14 83.6 84 58.3
Gohir.A02G170400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.5e-14 83.2 72 62.5
Glyma.11G076300 Glycine max HOM05D008224 ORTHO05D010083 2.0e-14 82.8 84 57.1
Oeu064592.1 Olea europaea HOM05D008224 ORTHO05D010083 7.7e-14 80.9 106 45.3
TPR.G18188 Trifolium pratense HOM05D008224 ORTHO05D010083 7.7e-14 80.9 79 59.5
CARHR281490 Cardamine hirsuta HOM05D014245 ORTHO05D010083 1.3e-13 80.1 100 49.0
Cc07_g10680 Coffea canephora HOM05D008224 ORTHO05D010083 2.9e-13 79.0 87 54.0
Nn5g30159 Nelumbo nucifera HOM05D008224 ORTHO05D010083 5.0e-13 78.2 95 49.5
Carub.0008s2826 Capsella rubella HOM05D014245 ORTHO05D010083 1.1e-12 77.0 94 48.9
Nn1g05883 Nelumbo nucifera HOM05D008224 ORTHO05D010083 1.1e-12 77.0 81 58.0
ClCG01G020280 Citrullus lanatus HOM05D008224 ORTHO05D010083 1.4e-12 76.6 136 40.4
Thhalv10005172m.g Eutrema salsugineum HOM05D014245 ORTHO05D010083 3.2e-12 75.5 103 46.6
FvH4_1g11880 Fragaria vesca HOM05D008224 ORTHO05D010083 3.2e-12 75.5 125 42.4
ATR0627G002 Amborella trichopoda HOM05D008224 ORTHO05D010083 5.5e-12 74.7 102 43.1
DCAR_016610 Daucus carota HOM05D008224 ORTHO05D010083 5.5e-12 74.7 97 50.5
Sp2g30460 Schrenkiella parvula HOM05D014245 ORTHO05D010083 5.5e-12 74.7 100 43.0
CsaV3_6G047070 Cucumis sativus L. HOM05D008224 ORTHO05D010083 7.2e-12 74.3 138 38.4
Sed0025479 Sechium edule HOM05D008224 ORTHO05D010083 7.2e-12 74.3 77 57.1
A06p26690 Brassica napus HOM05D014245 ORTHO05D010083 1.6e-11 73.2 106 41.5
MELO3C007900.2 Cucumis melo HOM05D008224 ORTHO05D010083 1.6e-11 73.2 112 43.8
FAN19G0355 Fragaria x ananassa HOM05D008224 ORTHO05D010083 2.7e-11 72.4 120 42.5
Hma1.2p1_0956F.1_g241380 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 6.1e-11 71.2 90 48.9
Hma1.2p1_2239F.1_g317816 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 6.1e-11 71.2 90 48.9
ATR0481G006 Amborella trichopoda HOM05D008224 ORTHO05D010083 1.0e-10 70.5 91 44.0
Actinidia28703 Actinidia chinensis HOM05D008224 ORTHO05D010083 2.3e-10 69.3 114 46.5
ECA246G4291 Erigeron canadensis HOM05D008224 ORTHO05D010083 3.0e-10 68.9 138 37.7
AL8G45290 Arabidopsis lyrata HOM05D014245 ORTHO05D010083 5.1e-10 68.2 92 44.6
Actinidia22982 Actinidia chinensis HOM05D002668 ORTHO05D003295 6.7e-10 67.8 86 50.0
Sed0001082 Sechium edule HOM05D008224 ORTHO05D010083 6.7e-10 67.8 120 39.2
BcaB02g10776 Brassica carinata HOM05D014245 ORTHO05D010083 2.0e-09 66.2 98 40.8
FAN26G2375 Fragaria x ananassa HOM05D011822 ORTHO05D010083 2.0e-09 66.2 93 44.1
Actinidia17446 Actinidia chinensis HOM05D008224 ORTHO05D010083 2.6e-09 65.9 97 46.4
Lsat_1_v5_gn_3_74461 Lactuca sativa HOM05D008224 ORTHO05D010083 9.7e-09 63.9 123 40.7
Sc16g0002160 Simmondsia chinensis HOM05D008224 ORTHO05D010083 2.8e-08 62.4 122 35.2
Rhsim10G0212800 Rhododendron simsii HOM05D008224 ORTHO05D010083 1.4e-07 60.1 101 45.5
EL10Ac6g15476 Beta vulgaris HOM05D008224 ORTHO05D010083 5.3e-07 58.2 131 35.9
BolSC21t60232H Brassica oleracea HOM05D014245 ORTHO05D010083 7.7e-06 54.3 96 37.5


User provided reference genes

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