Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 9.5e-141 503.4 245 100.0
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 3.1e-139 498.4 245 98.8
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 5.1e-134 481.1 245 95.1
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 1.1e-107 393.7 244 79.5
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.7e-105 386.3 242 74.8
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 5.9e-90 334.7 245 65.3
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 5.2e-62 241.9 239 52.7
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 1.0e-57 227.6 237 47.3
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 1.3e-57 227.3 251 47.0
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 5.0e-57 225.3 239 51.5
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 5.0e-57 225.3 239 51.5
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 7.2e-56 221.5 238 50.0
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 6.1e-55 218.4 238 49.6
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 4.0e-54 215.7 221 48.4
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 2.6e-53 213.0 240 46.7
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 8.3e-52 208.0 217 51.2
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 4.3e-48 195.7 198 48.5
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 5.2e-46 188.7 241 42.3
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 1.3e-44 184.1 239 43.5
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.2e-44 183.3 238 43.7
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 9.2e-43 177.9 219 43.4
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 2.7e-42 176.4 227 41.9
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 3.5e-42 176.0 244 42.2
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 3.9e-41 172.6 222 42.8
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.9e-40 170.2 224 42.4
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 1.2e-39 167.5 238 38.7
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.6e-39 167.2 230 42.2
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 3.1e-38 162.9 204 40.2
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 5.2e-38 162.2 219 41.6
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 2.6e-37 159.8 241 37.8
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 3.4e-37 159.5 192 47.9
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 4.4e-37 159.1 203 41.4
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 1.1e-35 154.5 188 46.8
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 1.1e-35 154.5 178 46.6
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 1.1e-35 154.5 219 39.3
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 4.6e-34 149.1 204 39.2
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 3.0e-33 146.4 166 50.0
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 3.0e-33 146.4 166 50.0
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 8.6e-33 144.8 156 50.6
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 1.5e-32 144.1 204 38.2
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.9e-32 143.7 157 47.8
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 1.9e-32 143.7 182 43.4
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 3.3e-32 142.9 200 42.5
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 1.2e-31 141.0 237 37.6
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 4.4e-29 132.5 178 41.6
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 1.3e-28 131.0 204 34.8
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 5.4e-27 125.6 123 52.0
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 7.1e-27 125.2 234 36.8
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 2.1e-26 123.6 241 34.0
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 6.0e-26 122.1 129 46.5
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 3.9e-25 119.4 241 37.3
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 3.9e-25 119.4 241 37.3
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 2.5e-24 116.7 237 36.7
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 3.3e-24 116.3 129 46.5
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 5.2e-22 109.0 174 42.0
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 1.5e-21 107.5 157 43.9
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 3.4e-21 106.3 123 43.1
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 7.6e-21 105.1 219 32.0
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.2e-20 103.6 116 43.1
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 1.2e-15 87.8 226 28.3
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 6.2e-15 85.5 182 33.0
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 6.2e-15 85.5 124 41.1
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 8.1e-15 85.1 121 40.5
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 3.2e-11 73.2 210 30.0
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 7.3e-08 62.0 41 63.4


User provided reference genes

Program Settings