Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.011G060900 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.6e-70 269.2 130 100.0
Gohir.D10G057000 Gossypium hirsutum HOM05D008353 ORTHO05D011820 6.7e-69 263.8 130 97.7
Gorai.011G061300 Gossypium raimondii HOM05D008353 ORTHO05D011820 1.2e-68 263.1 130 96.9
Gohir.D10G057200 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.6e-68 261.9 130 96.2
Gorai.011G061000 Gossypium raimondii HOM05D008353 ORTHO05D011820 2.5e-63 245.4 130 89.2
Gohir.A10G055100 Gossypium hirsutum HOM05D008353 ORTHO05D011820 3.2e-63 245.0 130 91.5
Gohir.1Z049336 Gossypium hirsutum HOM05D008353 ORTHO05D011820 7.2e-63 243.8 130 88.5
Gohir.D10G057100 Gossypium hirsutum HOM05D008353 ORTHO05D011820 7.2e-63 243.8 130 88.5
Gohir.A10G055200 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.2e-62 243.0 130 90.0
Gohir.A10G054950 Gossypium hirsutum HOM05D008353 ORTHO05D011820 4.0e-61 238.0 121 94.2
Gohir.A10G055250 Gossypium hirsutum HOM05D008353 ORTHO05D011820 4.4e-60 234.6 120 93.3
Gohir.A10G055150 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.4e-58 228.8 130 84.6
Gohir.D10G056800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 7.3e-47 190.7 130 73.8
Gohir.A10G054800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.2e-46 189.9 130 73.8
Gorai.011G060600 Gossypium raimondii HOM05D008353 ORTHO05D011820 2.1e-46 189.1 130 73.8
Gorai.011G060700 Gossypium raimondii HOM05D008353 ORTHO05D011820 6.8e-45 184.1 130 70.8
Gohir.D10G056900 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.0e-44 182.6 130 70.0
Gohir.A10G054900 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.2e-43 179.1 130 68.5
Gorai.011G061100 Gossypium raimondii HOM05D008353 ORTHO05D011820 6.4e-43 177.6 130 67.7
Gohir.D10G057133 Gossypium hirsutum HOM05D008353 ORTHO05D011820 2.4e-42 175.6 130 66.9
Gohir.A10G055066 Gossypium hirsutum HOM05D008353 ORTHO05D011820 1.1e-39 166.8 130 64.6
Gorai.008G022100 Gossypium raimondii HOM05D008353 ORTHO05D011820 3.4e-36 155.2 132 59.1
Gohir.D12G021800 Gossypium hirsutum HOM05D008353 ORTHO05D011820 5.8e-36 154.5 132 59.1
Thecc.02G091900 Theobroma cacao HOM05D008353 ORTHO05D011820 1.5e-31 139.8 131 50.4
COL.COLO4_11747 Corchorus olitorius HOM05D008353 ORTHO05D011820 2.0e-28 129.4 131 52.7
Thecc.02G091400 Theobroma cacao HOM05D008353 ORTHO05D011820 1.9e-26 122.9 130 48.5
Gorai.008G022300 Gossypium raimondii HOM05D008353 ORTHO05D218896 7.1e-26 120.9 130 52.3
Thecc.02G091700 Theobroma cacao HOM05D008353 ORTHO05D011820 2.3e-24 115.9 131 46.6
Manes.10G124700 Manihot esculenta HOM05D008353 ORTHO05D011820 2.1e-14 82.8 116 37.1
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.2e-12 77.0 119 37.0
Atru.chr13.1023 Acer truncatum HOM05D008353 ORTHO05D001895 3.4e-12 75.5 91 37.4
Atru.chr13.1025 Acer truncatum HOM05D008353 ORTHO05D001895 4.4e-12 75.1 118 33.9
Sabra01G0166900 Salix brachista HOM05D008353 ORTHO05D001895 5.8e-12 74.7 90 43.3
Manes.07G022000 Manihot esculenta HOM05D008353 ORTHO05D001895 9.9e-12 73.9 119 32.8
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 9.9e-12 73.9 90 42.2
Sabra01G0167300 Salix brachista HOM05D008353 ORTHO05D001895 9.9e-12 73.9 90 42.2
COL.COLO4_11748 Corchorus olitorius HOM05D008353 ORTHO05D001895 1.7e-11 73.2 116 33.6
Manes.07G021800 Manihot esculenta HOM05D008353 ORTHO05D001895 3.8e-11 72.0 117 31.6
Thecc.02G091600 Theobroma cacao HOM05D008353 ORTHO05D001895 6.4e-11 71.2 118 36.4
Atru.chr8.2426 Acer truncatum HOM05D008353 ORTHO05D001895 1.4e-10 70.1 119 32.8
Potri.004G220400 Populus trichocarpa HOM05D008353 ORTHO05D001895 2.4e-10 69.3 118 34.7
Potri.004G220550 Populus trichocarpa HOM05D008353 ORTHO05D001895 3.2e-10 68.9 118 34.7
Potri.004G220700 Populus trichocarpa HOM05D008353 ORTHO05D001895 3.2e-10 68.9 118 34.7
Manes.10G124100 Manihot esculenta HOM05D008353 ORTHO05D001895 4.6e-09 65.1 114 34.2
Thecc.02G091800 Theobroma cacao HOM05D008353 ORTHO05D001895 4.6e-09 65.1 118 33.9
Manes.10G123900 Manihot esculenta HOM05D008353 ORTHO05D001895 6.0e-09 64.7 114 34.2
Thecc.02G091500 Theobroma cacao HOM05D008353 ORTHO05D001895 1.3e-08 63.5 122 33.6
Thecc.02G092000 Theobroma cacao HOM05D008353 ORTHO05D001895 6.6e-08 61.2 120 31.7
Gohir.D02G213100 Gossypium hirsutum HOM05D008353 ORTHO05D001895 1.5e-07 60.1 120 31.7
Gorai.005G241000 Gossypium raimondii HOM05D008353 ORTHO05D001895 1.5e-07 60.1 120 31.7
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 3.3e-07 58.9 124 35.5
Potri.003G011200 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.3e-06 57.0 119 29.4
Gohir.A03G192300 Gossypium hirsutum HOM05D008353 ORTHO05D001895 1.6e-06 56.6 120 29.2
Gorai.005G241100 Gossypium raimondii HOM05D008353 ORTHO05D001895 2.1e-06 56.2 117 32.5
Gohir.A03G192200 Gossypium hirsutum HOM05D008353 ORTHO05D001895 2.8e-06 55.8 117 34.2
Gohir.D02G213200 Gossypium hirsutum HOM05D008353 ORTHO05D001895 3.6e-06 55.5 117 32.5
Manes.07G021400 Manihot esculenta HOM05D008353 ORTHO05D001895 4.8e-06 55.1 118 29.7


User provided reference genes

Program Settings