Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.011G050900 Gossypium raimondii HOM05D008798 ORTHO05D011016 2.4e-223 778.5 384 100.0
Gohir.D10G047800 Gossypium hirsutum HOM05D008798 ORTHO05D011016 2.3e-221 771.9 384 99.0
Gohir.A10G046500 Gossypium hirsutum HOM05D008798 ORTHO05D011016 2.3e-213 745.3 388 94.6
Duzib160G0760 Durio zibethinus HOM05D008798 ORTHO05D011016 1.6e-174 616.3 391 77.5
Ciclev10015548m.g Citrus clementina HOM05D008798 ORTHO05D011016 2.9e-128 462.6 387 59.2
Atru.chr5.2787 Acer truncatum HOM05D008798 ORTHO05D011016 3.2e-127 459.1 389 58.9
Cfa000742 Carpinus fangiana HOM05D008798 ORTHO05D011016 6.1e-126 454.9 374 59.4
Potri.003G149300 Populus trichocarpa HOM05D008798 ORTHO05D011016 2.6e-124 449.5 390 57.7
Potri.001G081100 Populus trichocarpa HOM05D008798 ORTHO05D011016 5.7e-124 448.4 388 57.2
Thecc.06G136100 Theobroma cacao HOM05D008798 ORTHO05D011016 1.1e-122 444.1 257 83.3
GSVIVG01013644001 Vitis vinifera HOM05D008798 ORTHO05D011016 3.8e-120 435.6 383 57.4
Dinv15940 Davidia involucrata HOM05D008798 ORTHO05D011016 1.6e-118 430.3 396 57.8
CiPaw.09G150900 Carya illinoinensis HOM05D008798 ORTHO05D011016 1.8e-117 426.8 393 54.7
Manes.16G054300 Manihot esculenta HOM05D008798 ORTHO05D011016 9.8e-116 421.0 390 55.4
TWI09G1085 Tripterygium wilfordii HOM05D008798 ORTHO05D011016 2.4e-114 416.4 380 55.8
TAR626G1932 Trochodendron aralioides HOM05D008798 ORTHO05D011016 2.6e-108 396.4 387 54.3
Dinv15941 Davidia involucrata HOM05D008798 ORTHO05D011016 1.1e-106 391.0 395 54.9
Eucgr.E04362 Eucalyptus grandis HOM05D008798 ORTHO05D011016 1.1e-103 380.9 363 51.5
Eucgr.E02024 Eucalyptus grandis HOM05D008798 ORTHO05D011016 4.3e-103 379.0 363 51.2
CSS0041632 Camellia sinensis var. sinensis HOM05D008798 ORTHO05D011016 3.6e-102 375.9 367 55.0
DCAR_003802 Daucus carota HOM05D008798 ORTHO05D011016 3.0e-96 356.3 385 48.8
vmacro03488 Vaccinium macrocarpon HOM05D008798 ORTHO05D011016 8.0e-94 348.2 394 50.8
Rhsim13G0127600 Rhododendron simsii HOM05D008798 ORTHO05D011016 5.8e-92 342.0 413 47.5
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 1.4e-85 320.9 391 44.5
Zm00001eb213680 Zea mays HOM05D008798 ORTHO05D011016 5.8e-68 262.3 355 38.9
ATR0763G057 Amborella trichopoda HOM05D008798 ORTHO05D011016 3.8e-67 259.6 259 51.0
SEGI_41343 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 8.4e-67 258.5 359 36.5
Hma1.2p1_1159F.1_g262420 Hydrangea macrophylla HOM05D008798 ORTHO05D011016 5.6e-55 219.2 227 55.1
Os03g0777600 Oryza sativa ssp. japonica HOM05D008798 ORTHO05D011016 1.6e-49 201.1 288 36.8
Zm00001eb123420 Zea mays HOM05D008798 ORTHO05D011016 1.0e-40 171.8 202 41.1
Pp3c9_15430 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.2e-33 148.3 373 28.2
SMO367G1240 Selaginella moellendorffii HOM05D009232 ORTHO05D013348 5.1e-32 142.9 329 30.7
Pp3c9_12300 Physcomitrium patens HOM05D008798 ORTHO05D011016 4.3e-31 139.8 377 28.1
Mapoly0044s0079 Marchantia polymorpha HOM05D008798 ORTHO05D011016 2.4e-29 134.0 374 27.8
Haze_05996 Corylus avellana HOM05D008798 ORTHO05D011016 9.1e-29 132.1 143 49.0
Haze_05995 Corylus avellana HOM05D008798 ORTHO05D011016 1.1e-26 125.2 106 58.5
AagrBONN_evm.TU.Sc2ySwM_344.179 Anthoceros agrestis HOM05D008798 ORTHO05D011016 1.4e-24 118.2 301 27.2
Pp3c23_9830 Physcomitrium patens HOM05D008798 ORTHO05D011016 2.2e-22 110.9 265 27.2
Pp3c20_17720 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.8e-21 107.8 245 26.9
Zm00001eb431530 Zea mays HOM05D008798 ORTHO05D011016 3.6e-17 93.6 108 42.6
SEGI_25661 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 6.3e-14 82.8 107 39.3
CBR_g6349 Chara braunii HOM05D000186 ORTHO05D000347 2.4e-13 80.9 283 23.7
MBI01_g35739_MAGBIO Magnolia biondii HOM05D008798 ORTHO05D000004 3.8e-11 73.6 55 56.4
ATR0168G001 Amborella trichopoda HOM05D008798 ORTHO05D011016 5.5e-10 69.7 64 51.6


User provided reference genes

Program Settings