Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 9.0e-61 236.9 132 100.0
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.9e-59 231.1 132 97.7
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.9e-59 231.1 132 98.5
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 5.4e-58 227.6 132 96.2
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 5.4e-58 227.6 132 96.2
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 6.0e-57 224.2 132 94.7
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.0e-56 223.4 132 95.5
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 7.4e-55 217.2 131 93.9
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 1.3e-54 216.5 132 93.9
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.3e-54 216.5 130 91.5
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 6.2e-54 214.2 129 89.9
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 8.1e-54 213.8 130 90.0
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 1.1e-53 213.4 129 89.9
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 1.4e-53 213.0 129 89.1
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 1.8e-53 212.6 131 88.5
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.8e-53 212.6 130 89.2
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 2.4e-53 212.2 130 87.7
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 4.0e-53 211.5 130 89.2
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 5.3e-53 211.1 130 86.9
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 5.3e-53 211.1 129 89.1
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 6.9e-53 210.7 130 88.5
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 9.0e-53 210.3 129 88.4
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.2e-52 209.9 129 89.1
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.2e-52 209.9 129 88.4
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 1.2e-52 209.9 130 88.5
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 2.0e-52 209.1 127 88.2
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 2.6e-52 208.8 129 86.8
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 3.4e-52 208.4 130 88.5
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 3.4e-52 208.4 130 85.4
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 3.4e-52 208.4 130 85.4
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 3.4e-52 208.4 129 87.6
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 4.5e-52 208.0 130 86.9
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 4.5e-52 208.0 126 89.7
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 4.5e-52 208.0 127 89.0
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 5.8e-52 207.6 129 87.6
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 5.8e-52 207.6 129 86.8
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 7.6e-52 207.2 131 87.0
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 7.6e-52 207.2 129 88.4
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 7.6e-52 207.2 130 88.5
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 1.3e-51 206.5 129 86.0
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 1.3e-51 206.5 129 86.0
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 1.3e-51 206.5 130 86.2
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 1.3e-51 206.5 130 86.2
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 1.7e-51 206.1 126 88.1
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 2.2e-51 205.7 131 86.3
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 2.9e-51 205.3 129 84.5
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 2.9e-51 205.3 130 85.4
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 2.9e-51 205.3 129 88.4
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 3.8e-51 204.9 130 85.4
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 3.8e-51 204.9 130 85.4
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 3.8e-51 204.9 129 86.0
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 4.9e-51 204.5 126 88.1
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 6.4e-51 204.1 132 83.3
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 6.4e-51 204.1 132 83.3
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 6.4e-51 204.1 129 86.8
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 8.4e-51 203.8 126 86.5
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 8.4e-51 203.8 126 88.1
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 1.4e-50 203.0 130 85.4
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.9e-50 202.6 126 87.3
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.4e-50 202.2 130 85.4
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 3.2e-50 201.8 130 83.8
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 3.2e-50 201.8 130 83.8
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 3.2e-50 201.8 130 83.8
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 3.2e-50 201.8 130 85.4
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 3.2e-50 201.8 130 84.6
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 7.1e-50 200.7 131 82.4
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 7.1e-50 200.7 130 83.8
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 1.2e-49 199.9 140 80.0
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 1.2e-49 199.9 130 83.1
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 1.2e-49 199.9 130 83.1
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 1.2e-49 199.9 125 84.8
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 2.1e-49 199.1 131 85.5
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 6.0e-49 197.6 139 80.6
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 1.8e-48 196.1 132 82.6
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.8e-48 196.1 122 91.8
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 8.7e-48 193.7 113 93.8
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.5e-47 193.0 122 90.2
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 3.3e-47 191.8 130 78.5
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 2.1e-46 189.1 136 79.4
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.1e-46 189.1 127 79.5
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.8e-46 188.0 144 75.0
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 4.8e-46 188.0 112 88.4
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 4.8e-46 188.0 130 80.0
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 1.8e-45 186.0 185 62.7
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.4e-45 185.7 127 78.0
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 2.4e-45 185.7 111 88.3
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 9.0e-45 183.7 111 89.2
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.5e-44 183.0 129 76.7
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 4.5e-44 181.4 112 87.5
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 1.0e-43 180.3 106 91.5
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 6.5e-43 177.6 110 84.5
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 8.4e-43 177.2 120 80.8
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 2.5e-42 175.6 112 83.9
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 2.5e-42 175.6 125 72.8
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 3.2e-42 175.3 110 83.6
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 4.2e-42 174.9 104 91.3
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 7.1e-42 174.1 105 89.5
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 7.1e-42 174.1 108 85.2
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 9.3e-42 173.7 110 82.7
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 9.3e-42 173.7 122 80.3
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 2.1e-41 172.6 121 78.5
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 3.5e-41 171.8 121 78.5
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 6.0e-41 171.0 105 87.6
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.3e-40 169.9 105 86.7
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 1.3e-40 169.9 128 76.6
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 1.5e-39 166.4 110 80.9
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 3.7e-38 161.8 132 71.2
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 3.7e-38 161.8 125 64.8
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 4.8e-38 161.4 121 75.2
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 4.8e-38 161.4 132 72.0
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 3.1e-37 158.7 165 57.6
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 1.2e-36 156.8 93 89.2
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 1.5e-36 156.4 90 92.2
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 2.6e-36 155.6 87 95.4
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 4.5e-36 154.8 95 87.4
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 4.5e-36 154.8 91 89.0
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 7.6e-36 154.1 125 68.8
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 1.7e-35 152.9 126 65.1
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 2.9e-35 152.1 87 90.8
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 5.0e-35 151.4 90 90.0
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 6.5e-35 151.0 128 60.9
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 1.4e-34 149.8 96 81.2
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 7.2e-34 147.5 116 74.1
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 1.2e-33 146.7 91 83.5
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 1.2e-33 146.7 110 68.2
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 2.7e-33 145.6 84 88.1
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 1.8e-32 142.9 87 88.5
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 2.3e-32 142.5 94 79.8
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.3e-32 142.5 95 87.4
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 2.3e-32 142.5 88 87.5
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 7.4e-31 137.5 129 66.7
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 7.4e-31 137.5 96 78.1
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 2.4e-29 132.5 101 74.3
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 1.1e-26 123.6 71 90.1
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.6e-25 119.8 91 74.7
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.6e-25 119.8 91 74.7
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 7.9e-25 117.5 70 88.6
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 4.4e-23 111.7 80 77.5
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 4.1e-21 105.1 125 47.2
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 5.3e-21 104.8 61 88.5
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 1.5e-20 103.2 63 84.1
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 1.4e-18 96.7 110 56.4
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 2.5e-18 95.9 67 71.6
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 3.2e-18 95.5 121 41.3
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 9.4e-18 94.0 64 73.4
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 2.7e-17 92.4 64 71.9
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 4.7e-17 91.7 78 61.5
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 3.0e-16 89.0 63 71.4
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 3.0e-16 89.0 65 70.8
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 2.6e-15 85.9 68 64.7
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 7.4e-15 84.3 51 88.2
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 3.1e-13 79.0 122 38.5
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 2.5e-10 69.3 123 34.1
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 4.0e-08 62.0 123 35.8
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 1.7e-06 56.6 51 60.8


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