Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 9.2e-100 367.5 276 100.0
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.2e-88 328.2 281 83.6
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.0e-82 310.8 305 72.8
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 1.3e-53 214.2 305 44.9
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 1.4e-52 210.7 308 59.1
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 1.7e-45 187.2 284 48.9
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 4.6e-43 179.1 167 64.1
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.1e-43 178.7 171 62.6
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 6.7e-42 175.3 172 55.2
Gohir.A05G159300 Gossypium hirsutum HOM05D007160 ORTHO05D005331 7.4e-41 171.8 163 62.0
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.1e-15 88.2 130 46.2
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.4e-15 87.8 97 56.7
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.4e-15 87.8 170 39.4
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 7.0e-15 85.5 129 44.2
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 7.0e-15 85.5 105 51.4
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 7.0e-15 85.5 105 51.4
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 5.9e-14 82.4 88 54.5
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 7.7e-14 82.0 173 34.7
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 1.0e-13 81.6 88 48.9
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.0e-13 81.6 88 48.9
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 1.7e-13 80.9 107 51.4
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 2.2e-13 80.5 101 48.5
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 2.2e-13 80.5 150 40.7
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 2.2e-13 80.5 169 37.3
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.8e-13 79.7 129 43.4
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 8.5e-13 78.6 181 37.6
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-12 78.2 95 51.6
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 1.1e-12 78.2 111 46.8
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 1.5e-12 77.8 131 42.7
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 1.5e-12 77.8 170 37.1
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 1.9e-12 77.4 322 36.3
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 4.2e-12 76.3 125 42.4
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 7.2e-12 75.5 104 44.2
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 7.2e-12 75.5 161 41.6
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 9.4e-12 75.1 54 66.7
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.6e-11 74.3 168 36.9
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 1.6e-11 74.3 158 40.5
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 1.6e-11 74.3 97 51.5
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 2.7e-11 73.6 128 40.6
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 3.6e-11 73.2 151 40.4
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 3.6e-11 73.2 88 45.5
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 4.7e-11 72.8 128 40.6
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 8.0e-11 72.0 128 41.4
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 8.0e-11 72.0 161 35.4
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 1.0e-10 71.6 165 33.3
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.4e-10 71.2 179 35.2
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 1.8e-10 70.9 211 32.7
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 2.3e-10 70.5 117 41.0
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.3e-10 70.5 125 42.4
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.3e-10 70.5 112 45.5
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 3.0e-10 70.1 89 50.6
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 4.0e-10 69.7 146 39.0
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 5.2e-10 69.3 181 37.0
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.2e-10 69.3 119 42.0
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 8.8e-10 68.6 168 35.7
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.2e-09 68.2 123 42.3
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.2e-09 68.2 161 32.9
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 2.0e-09 67.4 98 46.9
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 2.6e-09 67.0 87 49.4
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 2.6e-09 67.0 168 35.7
COL.COLO4_31421 Corchorus olitorius HOM05D007160 ORTHO05D005331 3.4e-09 66.6 62 59.7
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 4.4e-09 66.2 82 42.7
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.7e-09 65.9 133 39.8
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.7e-09 65.9 133 39.8
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 5.7e-09 65.9 149 35.6
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 5.7e-09 65.9 128 39.1
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 7.5e-09 65.5 133 36.8
Manes.16G031700 Manihot esculenta HOM05D007160 ORTHO05D005331 7.5e-09 65.5 157 31.8
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 9.8e-09 65.1 112 38.4
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.3e-08 64.7 105 42.9
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 1.3e-08 64.7 118 33.1
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 1.7e-08 64.3 167 34.7
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 2.8e-08 63.5 86 44.2
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 3.7e-08 63.2 156 34.6
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 3.7e-08 63.2 148 35.8
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 4.8e-08 62.8 105 43.8
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 6.3e-08 62.4 149 34.2
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 1.1e-07 61.6 155 34.8
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 1.8e-07 60.8 100 43.0
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 1.8e-07 60.8 153 37.3
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 2.4e-07 60.5 109 43.1
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 3.1e-07 60.1 140 35.0
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 4.1e-07 59.7 118 40.7
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 5.4e-07 59.3 168 30.4
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.4e-07 59.3 118 39.0
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 7.0e-07 58.9 153 35.3
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 7.0e-07 58.9 158 32.3
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.2e-06 58.2 172 34.3
CARHR027910 Cardamine hirsuta HOM05D009159 ORTHO05D005331 2.7e-06 57.0 151 33.8
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 3.5e-06 56.6 156 35.9
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 3.5e-06 56.6 155 34.8
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 4.5e-06 56.2 167 32.3
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 7.7e-06 55.5 133 34.6


User provided reference genes

Program Settings