Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.6e-125 452.2 249 100.0
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.3e-124 449.9 249 99.6
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.8e-121 438.3 249 96.4
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 8.4e-68 261.2 254 63.0
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 5.6e-64 248.4 247 62.8
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 9.3e-59 231.1 223 65.0
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.1e-42 176.8 269 43.9
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 6.7e-41 171.8 252 50.4
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.5e-40 170.6 252 51.6
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.2e-37 161.0 223 49.8
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 1.5e-37 160.6 256 43.8
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.3e-36 157.5 260 46.2
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 8.5e-36 154.8 265 43.8
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.4e-35 154.1 256 44.1
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.4e-35 154.1 258 48.8
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.4e-35 154.1 258 48.8
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 2.5e-35 153.3 251 45.4
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 4.2e-35 152.5 258 42.6
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 5.5e-35 152.1 229 45.0
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.2e-34 151.0 260 43.8
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.2e-34 151.0 260 43.8
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 1.8e-33 147.1 246 43.5
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 3.0e-33 146.4 246 43.9
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 6.7e-33 145.2 244 42.6
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 8.8e-33 144.8 244 42.2
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.9e-32 143.7 258 41.9
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 2.5e-32 143.3 238 44.1
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 3.3e-32 142.9 243 41.6
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 7.4e-32 141.7 254 44.1
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 9.7e-32 141.4 243 46.5
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.7e-31 140.6 297 43.1
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 2.8e-31 139.8 241 43.2
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 1.1e-30 137.9 242 42.1
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.1e-30 137.9 268 40.3
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.4e-30 137.5 229 44.1
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 2.4e-30 136.7 282 39.7
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 4.1e-30 136.0 259 40.2
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 5.3e-30 135.6 242 44.2
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 5.3e-30 135.6 254 40.6
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 5.3e-30 135.6 232 43.5
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 6.9e-30 135.2 239 43.5
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 6.9e-30 135.2 243 40.7
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.2e-29 134.4 257 40.1
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.5e-29 134.0 260 39.6
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 2.0e-29 133.7 250 49.2
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 2.0e-29 133.7 228 43.4
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 2.0e-29 133.7 254 40.9
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 2.6e-29 133.3 235 44.7
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 2.6e-29 133.3 225 44.0
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 2.6e-29 133.3 253 44.7
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 2.6e-29 133.3 232 43.1
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 3.4e-29 132.9 240 44.2
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 3.4e-29 132.9 252 43.7
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 4.5e-29 132.5 257 42.8
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.9e-29 132.1 267 41.6
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 7.7e-29 131.7 271 39.9
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 1.0e-28 131.3 241 41.5
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.3e-28 131.0 235 44.7
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 1.3e-28 131.0 261 40.2
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.3e-28 131.0 259 41.7
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 2.2e-28 130.2 231 42.9
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 3.8e-28 129.4 244 42.2
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 8.5e-28 128.3 266 41.4
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.5e-28 128.3 266 41.4
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 1.9e-27 127.1 253 41.5
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 3.2e-27 126.3 248 41.5
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 4.2e-27 125.9 242 43.0
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 5.5e-27 125.6 200 44.5
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 5.5e-27 125.6 265 43.0
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 7.2e-27 125.2 267 40.1
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 2.1e-26 123.6 247 40.9
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 7.9e-26 121.7 282 36.2
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 1.4e-25 120.9 231 42.0
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.8e-25 120.6 242 40.5
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 3.0e-25 119.8 259 36.7
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 5.1e-25 119.0 229 40.2
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 6.7e-25 118.6 235 40.4
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 5.7e-24 115.5 249 38.6
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 1.3e-23 114.4 228 40.8
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 2.2e-23 113.6 225 40.9
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 8.2e-23 111.7 131 51.1
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 7.0e-22 108.6 238 39.5
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 1.2e-21 107.8 237 38.4
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 1.5e-21 107.5 281 35.9
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.4e-21 106.3 257 35.4
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 4.5e-21 105.9 123 50.4
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 5.9e-21 105.5 243 37.9
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 7.7e-21 105.1 260 35.8
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.7e-20 104.0 160 44.4
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 2.9e-20 103.2 227 38.8
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 8.5e-20 101.7 261 35.2
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 1.1e-19 101.3 274 34.3
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 3.2e-19 99.8 139 49.6
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 9.4e-19 98.2 293 37.2
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 4.7e-18 95.9 237 37.6
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 6.1e-18 95.5 268 36.2
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 8.8e-17 91.7 123 52.0
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 8.8e-17 91.7 276 34.1
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.0e-16 90.5 253 34.8
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 3.3e-16 89.7 191 39.3
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 2.2e-15 87.0 191 43.5
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 2.8e-15 86.7 264 33.0
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.1e-14 84.7 129 42.6
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.1e-14 84.7 258 32.6
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 1.4e-14 84.3 236 34.3
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.8e-14 84.0 258 32.6
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 2.4e-14 83.6 322 29.8
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 7.0e-14 82.0 188 37.2
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 1.2e-13 81.3 196 36.2
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 7.7e-13 78.6 256 31.2
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 6.5e-12 75.5 122 42.6
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 8.0e-10 68.6 311 29.3
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 8.0e-10 68.6 76 51.3
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.0e-09 68.2 130 43.1
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 2.6e-08 63.5 221 33.9
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 1.4e-06 57.8 362 24.6


User provided reference genes

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