Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.010G252600 Gossypium raimondii HOM05D003074 ORTHO05D002434 8.9e-47 190.3 122 100.0
Gohir.D06G213500 Gossypium hirsutum HOM05D003074 ORTHO05D002434 9.8e-46 186.8 122 98.4
Gohir.A06G207800 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.1e-33 146.7 123 85.4
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 1.9e-17 92.8 121 46.3
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 4.3e-17 91.7 121 47.9
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 4.3e-17 91.7 123 46.3
Gohir.D10G012900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 6.2e-16 87.8 122 45.1
Gorai.011G014600 Gossypium raimondii HOM05D003074 ORTHO05D002434 6.2e-16 87.8 122 45.1
Gorai.009G178200 Gossypium raimondii HOM05D003074 ORTHO05D002434 8.1e-16 87.4 124 48.4
Gohir.A10G013000 Gossypium hirsutum HOM05D003074 ORTHO05D002434 3.1e-15 85.5 122 43.4
Gohir.A05G169900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.3e-15 84.7 125 47.2
Gohir.D05G173050 Gossypium hirsutum HOM05D003074 ORTHO05D002434 3.4e-14 82.0 124 47.6
Duzib160G0150 Durio zibethinus HOM05D003074 ORTHO05D002434 5.8e-14 81.3 122 45.1
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 1.0e-10 70.5 121 36.4
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 1.8e-10 69.7 129 38.8
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.5e-09 66.6 125 33.6
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 1.5e-09 66.6 125 33.6
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.5e-09 66.6 121 35.5
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 1.9e-09 66.2 121 35.5
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.9e-09 66.2 121 34.7
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.9e-09 66.2 126 31.7
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 3.3e-09 65.5 121 37.2
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 5.6e-09 64.7 122 37.7
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 9.6e-09 63.9 122 33.6
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 9.6e-09 63.9 131 31.3
Glyma.08G316000 Glycine max HOM05D003074 ORTHO05D002434 1.3e-08 63.5 123 32.5
Medtr3g051570 Medicago truncatula HOM05D003074 ORTHO05D002434 1.3e-08 63.5 121 32.2
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.3e-08 63.5 127 34.6
Glyma.02G290900 Glycine max HOM05D003074 ORTHO05D002434 1.6e-08 63.2 121 34.7
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 2.1e-08 62.8 127 33.1
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 2.1e-08 62.8 123 32.5
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.1e-08 62.8 124 34.7
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 2.1e-08 62.8 124 33.1
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 2.1e-08 62.8 62 56.5
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 2.1e-08 62.8 121 32.2
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 2.1e-08 62.8 130 38.5
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.8e-08 62.4 124 31.5
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 2.8e-08 62.4 126 31.7
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 3.7e-08 62.0 125 31.2
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 3.7e-08 62.0 127 33.9
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 3.7e-08 62.0 131 35.9
THA.LOC104812967 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 3.7e-08 62.0 61 45.9
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 4.8e-08 61.6 136 30.1
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 4.8e-08 61.6 67 49.3
Phvul.006G043100 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 4.8e-08 61.6 122 32.0
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 6.2e-08 61.2 61 52.5
Dinv13888 Davidia involucrata HOM05D003074 ORTHO05D002434 6.2e-08 61.2 63 49.2
Lsat_1_v5_gn_5_6000 Lactuca sativa HOM05D003074 ORTHO05D002434 6.2e-08 61.2 60 50.0
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 8.1e-08 60.8 121 31.4
Eucgr.E04061 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.1e-07 60.5 125 35.2
LjContig00272g0022666 Lotus japonicus HOM05D003074 ORTHO05D002434 1.1e-07 60.5 122 36.1
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 1.4e-07 60.1 139 31.7
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.4e-07 60.1 139 31.7
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 1.4e-07 60.1 62 48.4
Atru.chr10.2213 Acer truncatum HOM05D003074 ORTHO05D002434 1.8e-07 59.7 70 44.3
CsaV3_1G010810 Cucumis sativus L. HOM05D003074 ORTHO05D002434 1.8e-07 59.7 58 53.4
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.8e-07 59.7 139 31.7
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.8e-07 59.7 139 31.7
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 2.4e-07 59.3 140 31.4
Cc09_g01730 Coffea canephora HOM05D003074 ORTHO05D002434 3.1e-07 58.9 64 45.3
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 3.1e-07 58.9 131 30.5
Migut.H01829 Erythranthe guttata HOM05D003074 ORTHO05D002434 3.1e-07 58.9 63 49.2
Eucgr.E04064 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.1e-07 58.9 129 34.1
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 3.1e-07 58.9 124 33.9
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 3.1e-07 58.9 121 33.9
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 4.0e-07 58.5 63 46.0
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 4.0e-07 58.5 128 32.8
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 4.0e-07 58.5 61 44.3
Eucgr.E04062 Eucalyptus grandis HOM05D003074 ORTHO05D002434 5.3e-07 58.2 125 35.2
Thhalv10026602m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 5.3e-07 58.2 64 46.9
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 5.3e-07 58.2 126 30.2
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 5.3e-07 58.2 143 29.4
Potri.011G139400 Populus trichocarpa HOM05D003074 ORTHO05D002434 6.9e-07 57.8 59 50.8
RcHm_v2.0_Chr5g0003291 Rosa chinensis HOM05D003074 ORTHO05D002434 6.9e-07 57.8 62 51.6
DCAR_008152 Daucus carota HOM05D003074 ORTHO05D002434 9.0e-07 57.4 77 45.5
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 9.0e-07 57.4 62 46.8
Phvul.008G267000 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 9.0e-07 57.4 121 33.1
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 9.0e-07 57.4 69 40.6
ECA246G0494 Erigeron canadensis HOM05D003074 ORTHO05D002434 1.2e-06 57.0 64 46.9
Eucgr.E04066 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.2e-06 57.0 122 35.2
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 1.2e-06 57.0 125 30.4
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.2e-06 57.0 62 46.8
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 1.2e-06 57.0 128 32.0
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 1.2e-06 57.0 121 33.1
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 1.5e-06 56.6 60 51.7
Carub.0007s1942 Capsella rubella HOM05D003074 ORTHO05D002434 1.5e-06 56.6 64 48.4
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 1.5e-06 56.6 59 49.2
RcHm_v2.0_Chr5g0039411 Rosa chinensis HOM05D003074 ORTHO05D002434 1.5e-06 56.6 63 47.6
DCAR_022560 Daucus carota HOM05D003074 ORTHO05D002434 2.0e-06 56.2 123 26.8
AT4G21920 Arabidopsis thaliana HOM05D003074 ORTHO05D002434 2.6e-06 55.8 64 46.9
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 2.6e-06 55.8 123 31.7
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.6e-06 55.8 124 32.3
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.6e-06 55.8 62 45.2
Lj6g0015217 Lotus japonicus HOM05D003074 ORTHO05D002434 2.6e-06 55.8 123 30.1
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 3.4e-06 55.5 121 33.1
BcaNung01717 Brassica carinata HOM05D003074 ORTHO05D002434 3.4e-06 55.5 64 40.6
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 3.4e-06 55.5 121 29.8
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 3.4e-06 55.5 121 29.8
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 3.4e-06 55.5 60 50.0
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 3.4e-06 55.5 129 29.5
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 4.5e-06 55.1 129 31.0
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 4.5e-06 55.1 59 50.8
AL7G31910 Arabidopsis lyrata HOM05D003074 ORTHO05D002434 5.8e-06 54.7 64 45.3
BcaNung00825 Brassica carinata HOM05D003074 ORTHO05D002434 5.8e-06 54.7 64 40.6
A03p53050 Brassica napus HOM05D003074 ORTHO05D002434 5.8e-06 54.7 64 40.6
C07p51480 Brassica napus HOM05D003074 ORTHO05D002434 5.8e-06 54.7 64 40.6
BolC7t45644H Brassica oleracea HOM05D003074 ORTHO05D002434 5.8e-06 54.7 64 40.6
BraA03t14377Z Brassica rapa HOM05D003074 ORTHO05D002434 5.8e-06 54.7 64 40.6
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 5.8e-06 54.7 65 46.2
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 5.8e-06 54.7 59 45.8
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 5.8e-06 54.7 68 50.0
Lsat_1_v5_gn_4_60581 Lactuca sativa HOM05D003074 ORTHO05D002434 5.8e-06 54.7 71 46.5
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 5.8e-06 54.7 121 28.9
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 7.6e-06 54.3 142 30.3
Aqoxy1G02176 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 7.6e-06 54.3 123 30.1
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 7.6e-06 54.3 59 47.5
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 7.6e-06 54.3 121 32.2
CARHR228720 Cardamine hirsuta HOM05D003074 ORTHO05D002434 1.0e-05 53.9 65 46.2
CDE02G3016 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.0e-05 53.9 63 47.6
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 1.0e-05 53.9 121 27.3
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 1.0e-05 53.9 59 47.5
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 1.0e-05 53.9 125 30.4
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 1.0e-05 53.9 63 47.6
MBI02_g07158_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.0e-05 53.9 62 40.3
Oeu063916.1 Olea europaea HOM05D003074 ORTHO05D002434 1.0e-05 53.9 122 30.3


User provided reference genes

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