Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 2.8e-132 475.3 246 100.0
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 6.9e-107 391.0 246 86.6
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 7.0e-67 258.1 251 58.6
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 4.0e-62 242.3 243 56.8
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 1.2e-61 240.7 243 56.4
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 2.6e-61 239.6 243 56.0
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 1.6e-58 230.3 253 55.7
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 2.3e-46 189.9 190 57.9
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.5e-32 144.1 241 38.2
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 2.8e-31 139.8 242 39.7
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 1.8e-30 137.1 256 38.7
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 4.0e-30 136.0 247 37.2
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 8.9e-30 134.8 247 37.2
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 3.4e-29 132.9 248 36.3
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 2.9e-28 129.8 234 37.2
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 3.2e-27 126.3 240 40.0
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 4.2e-27 125.9 261 33.7
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 9.3e-27 124.8 234 36.3
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 3.5e-26 122.9 243 35.8
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 7.8e-26 121.7 253 35.2
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 1.3e-25 120.9 247 36.4
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 1.7e-25 120.6 237 37.6
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 2.3e-25 120.2 189 40.7
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 1.5e-24 117.5 222 38.3
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 1.5e-24 117.5 260 35.4
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 2.5e-24 116.7 207 39.1
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 4.3e-24 115.9 259 34.0
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 7.3e-24 115.2 250 33.2
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 7.3e-24 115.2 236 36.0
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 1.6e-23 114.0 237 35.0
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 4.8e-23 112.5 286 29.4
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 3.1e-22 109.8 248 34.3
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 5.3e-22 109.0 272 32.4
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 5.3e-22 109.0 251 34.7
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 6.9e-22 108.6 201 38.3
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 1.5e-21 107.5 221 36.2
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 1.5e-21 107.5 234 37.6
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 3.8e-20 102.8 246 32.1
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 4.9e-20 102.4 278 30.9
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 4.2e-19 99.4 268 30.6
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 4.2e-19 99.4 214 35.5
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 4.2e-19 99.4 229 33.6
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 7.1e-19 98.6 277 30.0
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 7.1e-19 98.6 248 31.0
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 1.6e-18 97.4 268 30.6
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 1.6e-18 97.4 260 31.9
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 1.6e-18 97.4 199 35.2
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 2.7e-18 96.7 211 33.2
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 3.5e-18 96.3 278 29.5
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 3.5e-18 96.3 266 30.8
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 1.0e-17 94.7 211 33.2
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 1.3e-17 94.4 244 30.7
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 1.8e-17 94.0 194 33.0
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 3.9e-17 92.8 161 40.4
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 2.8e-15 86.7 204 32.8
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 4.8e-15 85.9 127 41.7
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 6.2e-15 85.5 200 34.5
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 6.2e-15 85.5 200 34.5
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 6.2e-15 85.5 222 32.4
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 8.1e-15 85.1 204 32.4
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 1.1e-14 84.7 184 31.5
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 2.0e-13 80.5 138 38.4
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 3.8e-12 76.3 237 30.4
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 4.9e-12 75.9 132 37.9
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 6.4e-12 75.5 205 30.7
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 6.4e-12 75.5 206 31.6
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 8.4e-12 75.1 275 26.9
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 8.4e-12 75.1 128 37.5
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 1.6e-10 70.9 196 30.6
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 2.7e-10 70.1 217 31.8
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 4.6e-10 69.3 242 28.5
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 4.6e-10 69.3 344 25.3
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 9.6e-08 61.6 149 30.9
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 2.8e-07 60.1 135 30.4


User provided reference genes

Program Settings