Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 2.4e-54 215.3 115 100.0
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 9.3e-54 213.4 115 99.1
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 8.7e-52 206.8 115 95.7
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 6.9e-41 170.6 104 87.5
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 3.8e-39 164.9 103 85.4
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.5e-35 152.1 104 74.0
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 2.1e-34 149.1 104 74.0
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 2.1e-34 149.1 104 74.0
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 2.8e-34 148.7 103 74.8
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 1.4e-33 146.4 103 75.7
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 1.4e-33 146.4 110 71.8
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.4e-33 146.4 104 72.1
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 1.8e-33 146.0 95 81.1
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 3.1e-33 145.2 100 75.0
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 3.1e-33 145.2 103 73.8
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 4.0e-33 144.8 103 72.8
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 4.0e-33 144.8 108 71.3
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 6.9e-33 144.1 103 75.7
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 2.6e-32 142.1 110 68.2
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 4.5e-32 141.4 103 73.8
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 5.8e-32 141.0 103 73.8
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 5.8e-32 141.0 106 70.8
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.0e-31 140.2 110 73.6
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.7e-31 139.4 116 66.4
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.2e-31 139.0 117 65.8
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 2.9e-31 138.7 117 65.8
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 3.8e-31 138.3 103 71.8
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 8.4e-31 137.1 114 65.8
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 8.4e-31 137.1 110 70.0
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 1.1e-30 136.7 112 65.2
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 2.5e-30 135.6 103 71.8
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 2.5e-30 135.6 98 73.5
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 3.2e-30 135.2 95 77.9
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 3.2e-30 135.2 117 62.4
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 3.2e-30 135.2 97 73.2
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 4.2e-30 134.8 94 76.6
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 1.2e-29 133.3 97 75.3
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 1.6e-29 132.9 96 74.0
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.1e-29 132.5 110 69.1
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 2.1e-29 132.5 112 68.8
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 2.7e-29 132.1 94 77.7
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 2.7e-29 132.1 117 62.4
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 3.5e-29 131.7 103 64.1
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 4.6e-29 131.3 103 68.9
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 7.9e-29 130.6 99 73.7
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 1.0e-28 130.2 110 62.7
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 1.0e-28 130.2 99 74.7
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 1.3e-28 129.8 103 68.9
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 1.8e-28 129.4 103 67.0
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 2.3e-28 129.0 103 66.0
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 5.1e-28 127.9 103 68.9
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 8.7e-28 127.1 103 69.9
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 1.1e-27 126.7 103 65.0
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.5e-27 126.3 99 72.7
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 1.5e-27 126.3 101 69.3
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 1.9e-27 125.9 103 66.0
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 5.7e-27 124.4 103 64.1
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 7.4e-27 124.0 103 64.1
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 1.3e-26 123.2 101 68.3
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 1.6e-26 122.9 103 63.1
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 2.1e-26 122.5 99 70.7
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 2.1e-26 122.5 100 68.0
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 3.7e-26 121.7 102 67.6
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 4.8e-26 121.3 103 66.0
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 4.8e-26 121.3 93 71.0
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 6.3e-26 120.9 82 79.3
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 6.3e-26 120.9 94 70.2
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 8.2e-26 120.6 103 65.0
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 1.4e-25 119.8 103 64.1
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 1.8e-25 119.4 101 63.4
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 1.8e-25 119.4 101 63.4
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.8e-25 119.4 103 64.1
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 4.1e-25 118.2 101 62.4
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 6.9e-25 117.5 101 62.4
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 9.0e-25 117.1 162 48.1
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 1.2e-24 116.7 103 59.2
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 3.4e-24 115.2 94 66.0
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 3.4e-24 115.2 112 58.0
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 4.5e-24 114.8 94 66.0
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 7.6e-24 114.0 100 61.0
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 1.7e-23 112.8 104 59.6
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 3.8e-23 111.7 101 62.4
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 6.5e-23 110.9 110 56.4
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 1.1e-22 110.2 129 51.2
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 4.2e-22 108.2 80 71.2
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 9.3e-22 107.1 119 52.9
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 4.6e-21 104.8 105 56.2
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 3.0e-20 102.1 95 54.7
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 1.5e-19 99.8 80 70.0
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 1.9e-19 99.4 106 52.8
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 4.3e-19 98.2 69 76.8
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 1.3e-18 96.7 82 62.2
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 1.6e-18 96.3 76 68.4
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 4.8e-18 94.7 71 74.6
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 4.8e-18 94.7 101 52.5
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 6.3e-18 94.4 82 65.9
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 1.4e-17 93.2 96 54.2
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 3.1e-17 92.0 80 66.2
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 5.5e-14 81.3 99 48.5
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 4.6e-13 78.2 97 46.4
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 6.7e-12 74.3 96 50.0
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 1.1e-09 67.0 55 61.8
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 7.7e-08 60.8 95 41.1
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 3.2e-06 55.5 81 42.0


User provided reference genes

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