Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 3.8e-171 604.7 303 100.0
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 4.5e-92 342.0 297 64.3
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 1.6e-84 317.0 290 62.1
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 7.5e-79 298.1 422 43.8
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 2.4e-77 293.1 264 62.1
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 6.0e-76 288.5 301 56.1
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 6.6e-75 285.0 290 58.3
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.9e-74 283.5 257 60.3
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.3e-74 282.3 303 55.1
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 9.5e-74 281.2 295 55.9
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 9.5e-74 281.2 295 55.9
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.4e-72 277.3 178 80.9
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 2.5e-66 256.5 423 39.7
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.8e-65 253.1 274 55.1
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 1.8e-64 250.4 283 50.5
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.6e-60 237.3 284 49.3
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 1.3e-59 234.2 351 42.5
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 3.9e-59 232.6 210 59.5
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 1.1e-58 231.1 210 59.0
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.6e-57 227.3 364 40.7
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 4.6e-52 209.1 256 46.9
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 2.4e-48 196.8 295 42.0
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 6.9e-48 195.3 316 38.9
Gohir.D11G334350 Gossypium hirsutum HOM05D001070 ORTHO05D010233 4.2e-45 186.0 163 65.6
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 5.4e-45 185.7 126 71.4
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 1.2e-44 184.5 261 42.9
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 1.2e-44 184.5 286 38.8
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 1.2e-44 184.5 286 38.8
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 1.2e-44 184.5 286 38.8
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 1.2e-44 184.5 286 38.8
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 1.8e-43 180.6 289 38.1
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 1.1e-42 177.9 266 40.2
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 4.8e-41 172.6 126 73.8
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 3.1e-40 169.9 163 60.1
Gohir.A11G193450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 3.8e-38 162.9 75 97.3
QL93p0141_0004 Quercus lobata HOM05D001070 ORTHO05D010233 3.8e-38 162.9 116 70.7
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 4.9e-38 162.5 381 33.6
Gorai.006G095000 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.1e-37 161.4 118 72.0
ClCG11G009260 Citrullus lanatus HOM05D001070 ORTHO05D010233 6.0e-36 155.6 109 71.6
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 6.0e-36 155.6 179 53.6
Gohir.D04G101450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.5e-34 151.0 79 87.3
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 1.9e-34 150.6 126 62.7
PSO357G0427 Papaver somniferum HOM05D001070 ORTHO05D010233 1.9e-34 150.6 215 45.1
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 8.2e-33 145.2 211 41.2
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 1.8e-32 144.1 191 41.4
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 6.5e-30 135.6 120 59.2
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 8.4e-30 135.2 120 57.5
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 9.3e-29 131.7 160 45.0
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 9.3e-29 131.7 126 52.4
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 2.1e-28 130.6 149 46.3
Nn6g34149 Nelumbo nucifera HOM05D001070 ORTHO05D010233 2.1e-28 130.6 159 50.9
Lju5009P0T46 Lonicera japonica HOM05D001070 ORTHO05D010233 1.5e-26 124.4 251 33.9
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.3e-26 122.9 115 60.0
Oeu058851.1 Olea europaea HOM05D001070 ORTHO05D010233 5.7e-26 122.5 77 76.6
Migut.G00823 Erythranthe guttata HOM05D001070 ORTHO05D010233 1.1e-24 118.2 164 47.6
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.5e-23 114.4 156 46.8
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 2.0e-23 114.0 120 56.7
SEGI_15283 Sequoiadendron giganteum HOM05D009451 ORTHO05D000681 4.5e-23 112.8 260 33.1
Gorai.012G102000 Gossypium raimondii HOM05D001070 ORTHO05D010233 7.6e-23 112.1 63 87.3
SEGI_13637 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 7.6e-23 112.1 236 33.9
SEGI_17643 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 7.6e-23 112.1 236 33.9
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 7.6e-23 112.1 236 33.9
SEGI_41003 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 7.6e-23 112.1 236 33.9
Migut.G01153 Erythranthe guttata HOM05D001070 ORTHO05D010233 1.0e-22 111.7 164 46.3
SEGI_27541 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 1.0e-22 111.7 288 31.6
Sed0027483 Sechium edule HOM05D001070 ORTHO05D010233 1.3e-22 111.3 102 56.9
GSVIVG01009552001 Vitis vinifera HOM05D001070 ORTHO05D010233 3.8e-22 109.8 98 64.3
Psat5g037720 Pisum sativum HOM05D001070 ORTHO05D010233 2.5e-21 107.1 299 29.4
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 9.4e-21 105.1 96 57.3
SEGI_28780 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 2.7e-20 103.6 191 36.6
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 1.8e-19 100.9 106 51.9
SEGI_40582 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 3.0e-19 100.1 130 43.8
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 5.1e-19 99.4 116 45.7
SEGI_31203 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 5.1e-19 99.4 148 40.5
Eucgr.I00434 Eucalyptus grandis HOM05D001070 ORTHO05D010233 1.5e-18 97.8 97 56.7
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 1.3e-17 94.7 88 58.0
Nn029s41578 Nelumbo nucifera HOM05D001070 ORTHO05D010233 3.1e-16 90.1 63 69.8
CsaV3_1G025490 Cucumis sativus L. HOM05D001070 ORTHO05D013014 9.1e-16 88.6 69 55.1
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 9.1e-16 88.6 191 32.5
HPP92_028417 Vanilla planifolia HOM05D001070 ORTHO05D010233 1.0e-14 85.1 107 43.0
Solyc11g021280.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.3e-14 84.7 49 75.5
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.4e-13 81.3 59 71.2
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 1.2e-12 78.2 68 52.9
ClCG02G009780 Citrullus lanatus HOM05D000445 ORTHO05D010658 1.4e-11 74.7 53 69.8
Psat0s1160g0280 Pisum sativum HOM05D001070 ORTHO05D002096 1.8e-11 74.3 189 32.8
Solyc10g049470.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 8.8e-11 72.0 147 36.1
CsaV3_1G025500 Cucumis sativus L. HOM05D001070 ORTHO05D010233 2.0e-10 70.9 104 44.2
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 9.7e-10 68.6 123 35.8
Nn1g08628 Nelumbo nucifera HOM05D001070 ORTHO05D002096 8.2e-09 65.5 49 67.3
LjContig00318g0026726 Lotus japonicus HOM05D000445 ORTHO05D000314 1.1e-08 65.1 67 50.7
SGA_v2.0_scaffold893G53699 Striga asiatica HOM05D001070 ORTHO05D010233 1.8e-08 64.3 142 32.4
Solyc00g500279.1 Solanum lycopersicum HOM05D001070 ORTHO05D022991 7.0e-08 62.4 137 36.5
Peaxi162Scf01305g00039 Petunia axillaris HOM05D001070 ORTHO05D010233 1.2e-07 61.6 46 63.0


User provided reference genes

Program Settings