Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 0.0e+00 1303.1 687 100.0
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 0.0e+00 1119.4 598 97.7
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.7e-307 1058.9 593 93.9
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 3.1e-173 612.8 653 57.6
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 9.1e-173 611.3 666 56.0
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.5e-151 540.8 697 50.1
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 2.7e-100 370.5 348 62.9
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.1e-80 303.9 362 51.4
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.2e-79 302.0 362 51.1
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.2e-79 302.0 362 51.1
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 1.4e-77 295.0 610 38.0
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 1.2e-71 275.4 630 36.5
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 2.1e-68 264.6 654 35.8
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 8.8e-67 259.2 604 35.8
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.5e-66 258.5 606 36.3
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.9e-61 241.5 596 36.7
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.5e-61 241.1 467 38.3
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.6e-60 238.4 650 35.4
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.8e-59 235.0 710 31.3
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 3.0e-59 234.2 548 36.7
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 3.1e-56 224.2 636 32.7
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.0e-54 219.2 635 34.2
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 4.2e-53 213.8 623 34.2
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.6e-52 210.7 617 33.9
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 4.7e-52 210.3 650 31.1
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.1e-52 209.9 622 33.4
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 3.0e-51 207.6 619 33.1
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 7.5e-50 203.0 612 30.7
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 1.3e-49 202.2 600 32.8
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.2e-49 201.4 619 32.3
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 6.3e-49 199.9 645 31.6
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.1e-48 197.2 642 31.5
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 7.0e-48 196.4 592 31.9
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.2e-47 195.7 713 29.7
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.1e-45 189.1 607 30.5
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 4.2e-45 187.2 628 29.9
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.6e-44 185.3 621 30.1
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 8.0e-44 183.0 553 33.1
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 6.8e-43 179.9 544 32.9
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 8.8e-43 179.5 620 30.8
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 7.5e-42 176.4 605 28.8
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 5.4e-40 170.2 382 34.3
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 1.2e-39 169.1 363 36.9
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 5.9e-39 166.8 363 37.2
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.3e-38 165.6 325 38.8
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.1e-37 162.5 628 28.2
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.1e-37 162.5 733 28.8
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 5.6e-37 160.2 347 35.4
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 5.6e-37 160.2 322 37.0
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 7.3e-37 159.8 220 45.0
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 9.5e-37 159.5 639 28.3
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.6e-36 158.7 629 28.9
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 2.1e-36 158.3 357 37.5
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 2.1e-36 158.3 362 35.9
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 2.1e-36 158.3 628 28.2
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.8e-36 157.9 700 27.9
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 1.0e-35 156.0 624 30.9
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.4e-35 155.6 133 62.4
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.8e-35 155.2 228 43.9
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 3.0e-35 154.5 133 56.4
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 5.2e-35 153.7 636 27.4
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 6.8e-35 153.3 153 52.9
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.2e-34 152.5 256 41.8
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 5.7e-34 150.2 645 27.4
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 9.8e-34 149.4 378 33.6
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.3e-33 149.1 485 30.7
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.3e-33 149.1 771 27.8
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 3.7e-33 147.5 461 30.6
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 4.9e-33 147.1 634 28.1
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.4e-32 145.6 304 38.2
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 5.4e-32 143.7 118 59.3
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 5.4e-32 143.7 611 29.0
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 1.2e-31 142.5 178 46.6
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 2.3e-30 138.3 593 27.3
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 8.6e-30 136.3 204 42.6
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.0e-27 129.4 596 27.7
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 1.8e-27 128.6 317 34.4
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 2.3e-27 128.3 594 26.3
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 6.8e-27 126.7 595 27.9
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.2e-26 125.9 620 26.8
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.5e-26 125.6 406 31.8
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 5.8e-26 123.6 467 28.1
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.4e-24 119.0 467 27.2
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.2e-24 117.9 511 29.2
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.6e-23 115.5 448 28.8
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 2.7e-23 114.8 158 41.8
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 2.7e-23 114.8 385 30.1
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 4.6e-23 114.0 482 27.4
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 1.0e-22 112.8 621 26.6
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.0e-22 112.8 208 38.5
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.3e-22 112.5 438 27.9
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 8.6e-22 109.8 607 26.2
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.5e-21 109.0 222 35.6
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 9.5e-21 106.3 617 24.6
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.8e-19 102.1 457 29.5
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.2e-18 99.4 521 23.4
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.1e-16 92.8 266 31.2
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 2.4e-16 91.7 69 63.8
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 2.7e-15 88.2 97 44.3
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 3.9e-14 84.3 131 35.9
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.9e-14 84.3 194 30.4
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 5.1e-14 84.0 144 36.8
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 5.1e-14 84.0 144 36.8
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.6e-12 79.0 278 27.7
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 7.6e-10 70.1 131 31.3
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 9.9e-10 69.7 290 27.6
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 2.9e-09 68.2 251 25.9
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 3.2e-08 64.7 165 33.9
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.1e-07 62.0 654 23.4
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 7.8e-07 60.1 126 34.9
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 6.6e-06 57.0 91 33.0


User provided reference genes

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