Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.3e-111 405.6 205 100.0
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.6e-110 401.0 205 99.5
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.2e-107 393.3 205 98.5
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.0e-71 273.9 210 70.0
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 2.4e-68 262.7 210 67.6
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 2.6e-67 259.2 208 66.3
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 3.2e-65 252.3 207 67.1
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 1.0e-58 230.7 209 64.1
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 3.2e-49 199.1 212 56.1
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 6.7e-47 191.4 211 53.1
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.8e-44 183.3 211 57.8
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 5.3e-44 181.8 213 54.5
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 2.0e-43 179.9 189 56.1
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.0e-42 177.6 210 52.4
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.9e-42 176.0 206 51.0
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.0e-42 175.3 213 53.1
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.0e-42 175.3 207 53.1
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 8.5e-42 174.5 213 53.1
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.1e-41 174.1 214 50.9
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.0e-39 167.5 217 47.9
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 1.8e-39 166.8 196 52.6
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 1.8e-39 166.8 196 52.6
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 3.0e-39 166.0 202 49.0
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.5e-38 163.7 218 50.0
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 7.4e-38 161.4 206 49.0
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 1.8e-36 156.8 203 47.3
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 3.5e-35 152.5 215 49.8
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 4.5e-35 152.1 225 41.8
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 1.0e-34 151.0 223 47.1
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 1.0e-34 151.0 215 48.4
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 8.5e-34 147.9 205 47.3
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 2.5e-33 146.4 225 42.2
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 3.2e-33 146.0 222 46.8
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 4.2e-33 145.6 200 48.0
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 4.2e-33 145.6 214 47.7
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 5.5e-33 145.2 213 46.9
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 9.4e-33 144.4 224 45.5
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 3.6e-32 142.5 230 40.9
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 8.0e-32 141.4 216 45.8
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 8.0e-32 141.4 224 45.5
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 5.2e-31 138.7 206 45.6
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 6.7e-31 138.3 199 47.7
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 3.3e-30 136.0 197 43.1
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 4.4e-30 135.6 199 40.7
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 5.7e-30 135.2 200 45.0
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 2.2e-29 133.3 201 41.8
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.8e-29 132.9 191 42.9
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.8e-29 132.9 201 42.8
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.7e-29 132.5 201 41.8
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 4.8e-29 132.1 190 47.4
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.4e-28 130.6 201 41.3
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 2.4e-28 129.8 201 41.3
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 5.9e-27 125.2 208 41.8
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 1.7e-26 123.6 176 46.0
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.7e-26 123.6 171 44.4
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.7e-26 123.6 196 42.3
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 1.7e-26 123.6 223 42.6
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.7e-26 123.6 186 42.5
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 2.9e-26 122.9 176 45.5
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 5.0e-26 122.1 258 37.2
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 1.5e-25 120.6 212 41.0
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 3.2e-25 119.4 190 43.2
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 7.2e-25 118.2 214 40.2
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 9.4e-25 117.9 218 43.6
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.2e-24 117.5 202 43.6
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 1.6e-24 117.1 239 34.7
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 8.0e-24 114.8 198 37.4
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 4.0e-23 112.5 213 40.4
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 6.8e-23 111.7 228 36.0
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 8.8e-23 111.3 188 41.0
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 1.5e-22 110.5 224 37.1
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 3.4e-22 109.4 184 41.8
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 1.3e-21 107.5 186 43.5
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 1.3e-21 107.5 186 43.5
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.8e-21 106.3 192 41.1
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.8e-21 106.3 194 38.7
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 3.7e-21 105.9 186 41.9
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 8.3e-21 104.8 193 42.0
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 1.1e-20 104.4 180 40.6
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.1e-20 104.4 201 35.3
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 1.4e-20 104.0 190 38.4
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 1.4e-20 104.0 190 38.4
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 5.4e-20 102.1 214 35.0
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 9.1e-20 101.3 200 36.0
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.2e-19 100.9 203 34.5
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 1.2e-19 100.9 144 43.8
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 1.6e-19 100.5 219 34.7
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 2.0e-19 100.1 203 36.9
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.7e-19 99.8 174 43.1
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 1.0e-18 97.8 198 36.4
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 2.9e-18 96.3 224 34.4
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.4e-15 87.4 187 38.5
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 1.1e-12 77.8 191 31.4
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 1.4e-12 77.4 198 31.8
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 1.8e-12 77.0 187 35.3
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 9.2e-12 74.7 166 33.1
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 2.0e-11 73.6 152 37.5
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 4.5e-11 72.4 227 29.1
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 4.5e-11 72.4 214 32.2
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 9.5e-09 64.7 130 38.5
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 1.2e-08 64.3 183 31.1
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 1.4e-07 60.8 201 29.9
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 5.2e-07 58.9 188 27.1
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 5.2e-07 58.9 188 27.1
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 1.2e-06 57.8 191 31.4
Lj7P307T15 Lonicera japonica HOM05D007182 ORTHO05D008919 4.4e-06 55.8 119 34.5


User provided reference genes

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