Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D06G040500 Gossypium hirsutum HOM05D011493 ORTHO05D013109 3.4e-39 164.5 79 100.0
Gorai.010G045300 Gossypium raimondii HOM05D011493 ORTHO05D013109 3.4e-39 164.5 79 100.0
Gohir.A06G039600 Gossypium hirsutum HOM05D011493 ORTHO05D013109 4.9e-38 160.6 79 97.5
Ciclev10003034m.g Citrus clementina HOM05D011493 ORTHO05D013109 1.3e-11 72.8 63 61.9
Manes.02G157200 Manihot esculenta HOM05D011493 ORTHO05D013109 3.9e-11 71.2 75 53.3
QL12p035663 Quercus lobata HOM05D011493 ORTHO05D013109 1.1e-10 69.7 74 55.4
QL12p035652 Quercus lobata HOM05D011493 ORTHO05D014644 7.4e-10 67.0 61 59.0
Sabra05G0127700 Salix brachista HOM05D011493 ORTHO05D013109 7.4e-10 67.0 64 57.8
CSS0035553 Camellia sinensis var. sinensis HOM05D011493 ORTHO05D013109 1.3e-09 66.2 56 60.7
Potri.005G170200 Populus trichocarpa HOM05D011493 ORTHO05D013109 6.2e-09 63.9 71 50.7
TWI12G1189 Tripterygium wilfordii HOM05D011493 ORTHO05D013109 1.5e-07 59.3 73 46.6
CAN.G535.10 Capsicum annuum HOM05D013119 ORTHO05D016173 4.5e-07 57.8 70 48.6
Atru.chr13.1282 Acer truncatum HOM05D028174 ORTHO05D013109 7.6e-07 57.0 67 47.8
Atru.chr13.1284 Acer truncatum HOM05D028174 ORTHO05D013109 9.9e-07 56.6 65 44.6
Cfa015935 Carpinus fangiana HOM05D011493 ORTHO05D013109 1.3e-06 56.2 77 49.4
Atru.chr13.1283 Acer truncatum HOM05D028174 ORTHO05D013109 1.7e-06 55.8 68 45.6
Haze_00556 Corylus avellana HOM05D011493 ORTHO05D013109 2.2e-06 55.5 61 54.1
CAN.G1853.1 Capsicum annuum HOM05D013119 ORTHO05D016173 4.9e-06 54.3 70 45.7
CAN.G535.9 Capsicum annuum HOM05D013119 ORTHO05D016173 4.9e-06 54.3 76 43.4
Peaxi162Scf00168g00086 Petunia axillaris HOM05D041953 ORTHO05D020918 6.4e-06 53.9 62 50.0


User provided reference genes

Program Settings