Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 4.7e-88 327.8 160 100.0
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 1.7e-77 292.7 153 94.8
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 2.0e-75 285.8 153 92.8
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 3.9e-58 228.4 156 74.4
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 8.6e-58 227.3 156 74.4
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 6.2e-48 194.5 156 61.5
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 1.1e-47 193.7 156 59.0
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 1.4e-47 193.4 156 60.9
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 6.8e-47 191.0 149 64.4
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 6.8e-47 191.0 147 64.6
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 6.8e-47 191.0 156 59.0
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 6.8e-47 191.0 157 62.4
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 6.8e-47 191.0 151 62.9
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 8.9e-47 190.7 148 62.8
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 1.2e-46 190.3 149 63.1
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 2.6e-46 189.1 152 63.2
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 3.4e-46 188.7 155 60.0
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 5.8e-46 188.0 138 72.5
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 7.6e-46 187.6 149 61.1
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 7.6e-46 187.6 158 59.5
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 9.9e-46 187.2 156 60.9
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 9.9e-46 187.2 154 63.0
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 1.7e-45 186.4 153 61.4
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 2.9e-45 185.7 154 62.3
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 2.9e-45 185.7 154 59.7
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 3.8e-45 185.3 156 60.3
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 4.9e-45 184.9 157 62.4
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 6.4e-45 184.5 151 60.9
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 8.4e-45 184.1 146 62.3
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 1.9e-44 183.0 148 64.2
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 4.2e-44 181.8 154 61.7
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 5.4e-44 181.4 155 58.1
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 7.1e-44 181.0 157 59.9
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 7.1e-44 181.0 157 58.0
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 3.5e-43 178.7 156 59.0
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 6.0e-43 177.9 139 61.2
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 1.3e-42 176.8 144 59.7
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 1.7e-42 176.4 144 60.4
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 2.3e-42 176.0 158 60.1
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 2.3e-42 176.0 139 61.9
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 3.0e-42 175.6 146 61.0
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 3.0e-42 175.6 156 61.5
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 3.9e-42 175.3 157 56.7
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 5.1e-42 174.9 144 59.7
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 1.1e-41 173.7 138 63.0
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 1.1e-41 173.7 145 58.6
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 1.1e-41 173.7 155 58.1
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 1.5e-41 173.3 138 63.8
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 1.5e-41 173.3 138 63.8
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 1.5e-41 173.3 157 56.1
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 2.5e-41 172.6 138 62.3
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 2.5e-41 172.6 149 59.7
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 4.3e-41 171.8 154 57.8
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 9.6e-41 170.6 142 62.7
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 1.6e-40 169.9 137 62.8
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 2.8e-40 169.1 152 58.6
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 2.8e-40 169.1 157 58.6
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 2.8e-40 169.1 157 58.6
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 3.6e-40 168.7 150 60.0
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 3.6e-40 168.7 160 56.2
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 4.7e-40 168.3 157 57.3
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 6.2e-40 167.9 157 57.3
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 2.4e-39 166.0 156 57.7
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 3.1e-39 165.6 155 54.8
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 4.0e-39 165.2 145 57.9
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 4.0e-39 165.2 156 58.3
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 6.9e-39 164.5 158 53.8
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 6.9e-39 164.5 155 57.4
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 9.0e-39 164.1 157 56.7
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 9.0e-39 164.1 164 54.3
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 1.2e-38 163.7 149 59.1
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 1.5e-38 163.3 160 53.8
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 3.4e-38 162.2 118 73.7
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 5.8e-38 161.4 156 53.2
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 5.8e-38 161.4 165 50.9
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 7.6e-38 161.0 146 56.2
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 7.6e-38 161.0 154 54.5
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 3.8e-37 158.7 156 53.8
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 4.9e-37 158.3 144 56.2
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 4.9e-37 158.3 158 55.1
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 8.4e-37 157.5 172 49.4
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 1.1e-36 157.1 144 54.9
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 1.1e-36 157.1 168 53.0
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 1.4e-36 156.8 158 51.3
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 1.9e-36 156.4 159 55.3
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 2.4e-36 156.0 146 54.1
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 3.2e-36 155.6 149 57.0
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 5.4e-36 154.8 162 53.1
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 7.1e-36 154.5 172 48.8
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 9.3e-36 154.1 144 54.2
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 2.7e-35 152.5 146 54.8
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 6.0e-35 151.4 145 54.5
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 1.0e-34 150.6 148 52.7
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 1.0e-34 150.6 137 56.9
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 1.7e-34 149.8 148 52.7
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 2.3e-34 149.4 164 50.6
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 3.3e-33 145.6 149 50.3
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 3.6e-32 142.1 153 49.7
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 8.1e-32 141.0 152 50.0
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 2.4e-31 139.4 121 57.0
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 2.6e-30 136.0 143 50.3
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 9.9e-30 134.0 116 58.6
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 6.0e-27 124.8 167 43.7
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 2.3e-26 122.9 152 44.7
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 2.5e-25 119.4 125 53.6
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 4.8e-24 115.2 117 57.3
Phvul.004G112200 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 9.9e-22 107.5 116 51.7
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 2.2e-21 106.3 73 65.8
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 8.4e-21 104.4 119 52.1
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 1.9e-20 103.2 193 36.3
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 1.9e-20 103.2 76 69.7
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 2.7e-19 99.4 144 38.9
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 4.6e-19 98.6 152 39.5
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 4.0e-15 85.5 59 71.2
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 2.6e-14 82.8 146 35.6
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 1.0e-13 80.9 58 70.7
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 1.2e-11 73.9 125 35.2
Os11g0597500 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 6.1e-11 71.6 147 33.3


User provided reference genes

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