Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 1.9e-250 868.6 423 100.0
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 2.8e-249 864.8 423 99.5
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 2.3e-243 845.1 423 97.9
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 2.3e-195 685.6 421 78.9
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 2.6e-178 629.0 420 75.0
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 5.8e-162 574.7 420 66.0
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 9.3e-160 567.4 408 68.9
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 2.1e-159 566.2 428 65.2
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 7.4e-157 557.8 420 66.7
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 2.8e-156 555.8 417 66.7
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 6.9e-155 551.2 420 64.5
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 2.0e-154 549.7 418 65.6
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 5.8e-154 548.1 414 64.7
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 7.6e-154 547.7 415 67.0
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 9.9e-154 547.4 411 64.7
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 9.3e-152 540.8 419 63.2
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.1e-149 533.9 420 61.9
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 1.9e-149 533.1 416 63.5
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 6.2e-148 528.1 419 61.8
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 8.2e-148 527.7 417 61.9
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 1.5e-146 523.5 423 59.3
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 1.0e-145 520.8 538 52.8
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 2.2e-145 519.6 421 62.5
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 2.9e-145 519.2 441 58.7
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 3.8e-145 518.8 419 63.5
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 1.2e-143 513.8 424 61.8
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 1.6e-143 513.5 417 62.6
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 2.7e-143 512.7 478 57.1
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 2.7e-143 512.7 418 61.5
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 3.5e-143 512.3 423 60.8
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 6.0e-143 511.5 421 62.7
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 1.3e-142 510.4 426 59.9
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 6.7e-142 508.1 411 63.0
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 1.5e-141 506.9 411 63.5
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 3.3e-141 505.8 416 60.8
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 4.3e-141 505.4 419 59.7
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 5.7e-141 505.0 416 61.3
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 5.7e-141 505.0 420 58.8
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 1.6e-140 503.4 419 58.0
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 2.2e-140 503.1 413 60.3
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 4.8e-140 501.9 416 61.1
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 6.3e-140 501.5 424 58.5
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 1.4e-139 500.4 417 61.6
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 1.8e-139 500.0 415 60.5
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 5.3e-139 498.4 417 60.9
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 6.9e-139 498.0 414 61.1
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 1.2e-138 497.3 417 60.7
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 1.2e-138 497.3 416 58.4
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 1.5e-138 496.9 424 58.7
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 4.5e-138 495.4 424 60.1
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.7e-137 493.4 423 58.4
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 3.8e-137 492.3 431 58.2
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 6.5e-137 491.5 412 60.7
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 1.4e-136 490.3 402 60.2
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 1.4e-136 490.3 433 58.4
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 1.9e-136 490.0 420 57.6
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 2.5e-136 489.6 410 60.2
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 3.2e-136 489.2 419 58.2
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 5.5e-136 488.4 419 58.7
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 2.7e-135 486.1 442 57.7
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 2.7e-135 486.1 442 57.7
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 6.1e-135 485.0 422 57.8
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 1.4e-134 483.8 419 58.2
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 1.5e-133 480.3 419 59.9
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 7.4e-133 478.0 372 66.1
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 9.7e-133 477.6 410 58.5
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 3.7e-132 475.7 416 58.9
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 4.8e-132 475.3 435 56.8
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.4e-131 473.8 453 55.0
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 1.8e-131 473.4 430 57.4
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 4.1e-131 472.2 419 57.0
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 1.7e-129 466.8 421 54.6
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 1.4e-128 463.8 439 53.3
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 4.2e-128 462.2 326 68.1
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 2.6e-125 453.0 412 55.6
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 3.7e-124 449.1 423 54.6
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.4e-123 447.2 372 59.1
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 8.8e-118 427.9 366 60.4
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 1.2e-114 417.5 382 56.3
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 8.5e-113 411.4 377 56.5
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 8.5e-113 411.4 401 53.6
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 1.1e-112 411.0 433 52.0
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.9e-112 410.2 431 50.6
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 4.2e-112 409.1 418 48.3
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 3.6e-111 406.0 434 49.3
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 7.5e-109 398.3 339 59.9
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 2.9e-105 386.3 416 46.6
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 4.2e-104 382.5 389 52.7
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 6.1e-103 378.6 351 57.3
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 4.0e-102 375.9 350 54.9
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 2.0e-90 337.0 426 43.2
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 3.5e-90 336.3 431 43.4
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 3.3e-88 329.7 226 75.2
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 4.3e-88 329.3 400 45.2
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 7.5e-85 318.5 353 48.7
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.2e-84 317.0 337 52.2
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 6.6e-81 305.4 288 51.4
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 4.3e-80 302.8 347 46.4
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.3e-68 264.6 290 47.2
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 1.1e-64 251.5 161 72.0
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 3.9e-57 226.5 188 54.3
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 2.0e-53 214.2 391 33.5
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.3e-49 201.4 166 68.1
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 2.5e-48 197.2 224 52.2
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 9.9e-45 185.3 223 42.2
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.4e-35 154.8 187 48.7
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 3.4e-29 133.7 159 50.3
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 2.7e-26 124.0 82 68.3
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 7.4e-16 89.4 62 62.9
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 4.1e-14 83.6 92 55.4
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 3.4e-13 80.5 196 30.6
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 1.8e-09 68.2 62 59.7


User provided reference genes

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