Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D05G352126 Gossypium hirsutum HOM05D007305 ORTHO05D009886 4.9e-45 184.1 94 100.0
Gorai.009G383800 Gossypium raimondii HOM05D007305 ORTHO05D009886 4.9e-45 184.1 94 100.0
Gohir.A04G032550 Gossypium hirsutum HOM05D007305 ORTHO05D009886 1.4e-44 182.6 94 98.9
Gorai.009G450700 Gossypium raimondii HOM05D007305 ORTHO05D009886 2.4e-39 165.2 83 100.0
Gohir.D03G068902 Gossypium hirsutum HOM05D007305 ORTHO05D009886 3.7e-32 141.4 76 90.8
Gorai.003G091400 Gossypium raimondii HOM05D007305 ORTHO05D009886 5.3e-31 137.5 69 94.2
Thecc.04G308500 Theobroma cacao HOM05D007305 ORTHO05D009886 1.6e-24 115.9 82 64.6
Cc04_g16800 Coffea canephora HOM05D007305 ORTHO05D009886 4.0e-23 111.3 77 67.5
CANSAT35G1669 Cannabis sativa HOM05D007305 ORTHO05D009886 9.0e-23 110.2 88 59.1
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 2.0e-22 109.0 80 62.5
Manes.06G030066 Manihot esculenta HOM05D007305 ORTHO05D009886 2.9e-21 105.1 80 60.0
Sabra06G0016700 Salix brachista HOM05D000027 ORTHO05D000066 3.8e-21 104.8 77 61.0
Sabra16G0035300 Salix brachista HOM05D007305 ORTHO05D009886 3.8e-21 104.8 77 61.0
Sabra17G0125400 Salix brachista HOM05D007305 ORTHO05D009886 3.8e-21 104.8 77 61.0
Sabra04G0080000 Salix brachista HOM05D007305 ORTHO05D009886 4.9e-21 104.4 77 59.7
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 8.4e-21 103.6 77 61.0
Manes.09G001301 Manihot esculenta HOM05D007305 ORTHO05D009886 1.4e-20 102.8 80 61.2
Sabra11G0081600 Salix brachista HOM05D007305 ORTHO05D009886 4.2e-20 101.3 81 56.8
Manes.13G089260 Manihot esculenta HOM05D007305 ORTHO05D009886 5.5e-20 100.9 70 65.7
Thecc.07G142000 Theobroma cacao HOM05D007305 ORTHO05D009886 3.5e-19 98.2 70 60.0
Thecc.02G280700 Theobroma cacao HOM05D007305 ORTHO05D009886 6.0e-19 97.4 68 63.2
Gohir.A05G322708 Gossypium hirsutum HOM05D007305 ORTHO05D009886 1.5e-17 92.8 86 48.8
SHI11625 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-16 89.7 91 44.0
Manes.07G072314 Manihot esculenta HOM05D007305 ORTHO05D009886 1.1e-15 86.7 80 52.5
SHI35106 Sapria himalayana HOM05D007305 ORTHO05D009886 1.1e-15 86.7 82 48.8
Cpa.g.sc74.28 Carica papaya HOM05D007305 ORTHO05D009886 2.4e-15 85.5 53 69.8
SHI27057 Sapria himalayana HOM05D007305 ORTHO05D009886 3.1e-15 85.1 75 49.3
SHI31578 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-14 83.2 82 45.1
Thecc.05G175600 Theobroma cacao HOM05D007305 ORTHO05D009886 1.2e-14 83.2 57 63.2
SHI17822 Sapria himalayana HOM05D000002 ORTHO05D009886 2.0e-14 82.4 91 40.7
Manes.09G019650 Manihot esculenta HOM05D007305 ORTHO05D009886 3.8e-13 78.2 80 51.2
SHI37667 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-13 77.4 75 44.0
SHI30681 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-12 75.5 59 50.8
Cpa.g.sc114.45 Carica papaya HOM05D007305 ORTHO05D009886 3.2e-12 75.1 48 70.8
SHI12340 Sapria himalayana HOM05D000002 ORTHO05D009886 2.1e-11 72.4 81 43.2
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 5.1e-10 67.8 64 51.6
SHI14995 Sapria himalayana HOM05D007305 ORTHO05D009886 8.8e-10 67.0 66 43.9
SHI03731 Sapria himalayana HOM05D007305 ORTHO05D009886 4.3e-09 64.7 76 40.8
TWI79G0335 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 2.4e-07 58.9 85 30.6
SHI36811 Sapria himalayana HOM05D007305 ORTHO05D009886 3.4e-06 55.1 43 48.8
SHI36830 Sapria himalayana HOM05D007305 ORTHO05D009886 3.4e-06 55.1 43 48.8
Manes.02G211261 Manihot esculenta HOM05D007305 ORTHO05D009886 5.9e-06 54.3 40 55.0
SHI27171 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-06 54.3 50 42.0
Cpa.g.sc11.108 Carica papaya HOM05D000002 ORTHO05D000047 7.7e-06 53.9 62 40.3


User provided reference genes

Program Settings