Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.009G366800 Gossypium raimondii HOM05D002452 ORTHO05D006766 8.6e-288 993.0 534 100.0
Gohir.D05G340400 Gossypium hirsutum HOM05D002452 ORTHO05D006766 9.6e-279 963.0 534 98.1
Gohir.A04G043100 Gossypium hirsutum HOM05D002452 ORTHO05D006766 5.3e-269 930.6 534 94.0
Thecc.07G126400 Theobroma cacao HOM05D002452 ORTHO05D006766 1.2e-212 743.4 539 76.3
COL.COLO4_17511 Corchorus olitorius HOM05D002452 ORTHO05D006766 8.3e-206 720.7 554 72.2
Duzib213G0380 Durio zibethinus HOM05D002452 ORTHO05D006766 1.1e-205 720.3 542 74.2
Gohir.D01G040900 Gossypium hirsutum HOM05D002452 ORTHO05D006766 6.6e-203 711.1 540 73.9
Gorai.002G051000 Gossypium raimondii HOM05D002452 ORTHO05D006766 6.6e-203 711.1 540 74.3
Gohir.A01G051100 Gossypium hirsutum HOM05D002452 ORTHO05D006766 9.9e-159 564.3 438 72.6
Cfa019543 Carpinus fangiana HOM05D002452 ORTHO05D006766 7.1e-157 558.1 541 59.1
Ciclev10019497m.g Citrus clementina HOM05D002452 ORTHO05D006766 9.6e-154 547.7 537 58.7
QL08p025729 Quercus lobata HOM05D002452 ORTHO05D006766 6.2e-153 545.0 548 57.3
Actinidia12591 Actinidia chinensis HOM05D002452 ORTHO05D006766 1.1e-152 544.3 548 58.9
vmacro11955 Vaccinium macrocarpon HOM05D002452 ORTHO05D006766 3.1e-152 542.7 550 58.0
CiPaw.12G112400 Carya illinoinensis HOM05D002452 ORTHO05D006766 4.0e-152 542.3 545 59.8
Potri.001G387300 Populus trichocarpa HOM05D002452 ORTHO05D006766 1.6e-148 530.4 537 59.6
Atru.chr2.2062 Acer truncatum HOM05D002452 ORTHO05D006766 2.3e-147 526.6 541 58.2
Rhsim06G0210300 Rhododendron simsii HOM05D002452 ORTHO05D006766 1.5e-146 523.9 595 53.8
TWI39G0752 Tripterygium wilfordii HOM05D002452 ORTHO05D006766 3.1e-144 516.2 536 56.7
CSS0001384 Camellia sinensis var. sinensis HOM05D002452 ORTHO05D006766 4.0e-144 515.8 546 57.0
Lj8C147T4 Lonicera japonica HOM05D002452 ORTHO05D006766 7.1e-141 505.0 583 53.9
Prupe.4G160000 Prunus persica HOM05D002452 ORTHO05D006766 3.5e-140 502.7 556 55.4
Dinv18382 Davidia involucrata HOM05D002452 ORTHO05D006766 7.9e-140 501.5 539 56.4
TAR626G0804 Trochodendron aralioides HOM05D002452 ORTHO05D006766 6.7e-139 498.4 548 54.9
TAR627G0084 Trochodendron aralioides HOM05D002452 ORTHO05D006766 1.3e-137 494.2 545 54.5
GSVIVG01014168001 Vitis vinifera HOM05D002452 ORTHO05D006766 2.2e-137 493.4 541 56.0
Eucgr.F01252 Eucalyptus grandis HOM05D002452 ORTHO05D006766 2.5e-133 479.9 538 53.5
Glyma.12G231200 Glycine max HOM05D002452 ORTHO05D006766 4.2e-133 479.2 542 54.4
Cc05_g10930 Coffea canephora HOM05D002452 ORTHO05D006766 3.6e-132 476.1 537 54.4
CANSAT35G1635 Cannabis sativa HOM05D002452 ORTHO05D006766 6.1e-132 475.3 582 52.6
Nn3g21096 Nelumbo nucifera HOM05D002452 ORTHO05D006766 8.8e-131 471.5 574 51.6
Manes.03G099700 Manihot esculenta HOM05D002452 ORTHO05D006766 9.7e-130 468.0 542 53.7
Atru.chr10.1169 Acer truncatum HOM05D002452 ORTHO05D006766 1.8e-128 463.8 500 56.4
arahy.Tifrunner.gnm1.ann1.69X35Q Arachis hypogaea HOM05D002452 ORTHO05D006766 2.2e-126 456.8 543 52.9
Nitab4.5_0000383g0070 Nicotiana tabacum HOM05D002452 ORTHO05D006766 1.4e-125 454.1 536 53.5
Psat0s2485g0160 Pisum sativum HOM05D002452 ORTHO05D006766 1.9e-125 453.8 547 51.9
SalBow8G0660 Salvia bowleyana HOM05D002452 ORTHO05D006766 1.9e-125 453.8 540 52.6
TPR.G16056 Trifolium pratense HOM05D002452 ORTHO05D006766 5.5e-125 452.2 554 52.2
CsaV3_4G033030 Cucumis sativus L. HOM05D002452 ORTHO05D006766 4.7e-124 449.1 544 52.4
SalBow1G0777 Salvia bowleyana HOM05D002452 ORTHO05D006766 7.9e-124 448.4 540 52.2
Sopen10g003230 Solanum pennellii HOM05D002452 ORTHO05D006766 7.9e-124 448.4 557 52.1
arahy.Tifrunner.gnm1.ann1.T9SFGX Arachis hypogaea HOM05D002452 ORTHO05D006766 1.0e-123 448.0 546 51.1
Peaxi162Scf00692g00318 Petunia axillaris HOM05D002452 ORTHO05D006766 3.9e-123 446.0 536 52.6
Solyc10g007400.4 Solanum lycopersicum HOM05D002452 ORTHO05D006766 3.9e-123 446.0 559 51.7
MD11G1266100 Malus domestica HOM05D002452 ORTHO05D006766 3.3e-122 443.0 546 52.4
RcHm_v2.0_Chr5g0030441 Rosa chinensis HOM05D002452 ORTHO05D006766 5.7e-122 442.2 575 49.7
Medtr2g075820 Medicago truncatula HOM05D002452 ORTHO05D006766 7.4e-122 441.8 546 52.2
Lalb_Chr20g0109181 Lupinus albus HOM05D002452 ORTHO05D006766 1.3e-121 441.0 542 51.5
MELO3C025646.2 Cucumis melo HOM05D002452 ORTHO05D006766 2.8e-121 439.9 544 51.8
PGR083G1533 Punica granatum HOM05D002452 ORTHO05D006766 4.8e-121 439.1 536 50.0
AUR62019605 Chenopodium quinoa HOM05D002452 ORTHO05D006766 8.2e-121 438.3 548 51.1
MSTRG.14972 Avicennia marina HOM05D002452 ORTHO05D006766 3.1e-120 436.4 546 51.8
Sc03g0010610 Simmondsia chinensis HOM05D002452 ORTHO05D006766 4.1e-120 436.0 551 51.4
Lj3g0025969 Lotus japonicus HOM05D002452 ORTHO05D006766 7.0e-120 435.3 545 50.3
SGA_v2.0_scaffold73G24396 Striga asiatica HOM05D002452 ORTHO05D006766 1.2e-119 434.5 545 51.0
Aqoxy1G01990 Aquilegia oxysepala HOM05D002452 ORTHO05D006766 2.0e-119 433.7 550 53.1
CAN.G904.34 Capsicum annuum HOM05D002452 ORTHO05D006766 2.6e-119 433.3 547 53.0
Haze_09304 Corylus avellana HOM05D002452 ORTHO05D006766 1.0e-118 431.4 458 55.9
ClCG11G017390 Citrullus lanatus HOM05D002452 ORTHO05D006766 1.3e-118 431.0 558 50.2
Sed0025986 Sechium edule HOM05D002452 ORTHO05D006766 1.3e-118 431.0 543 49.7
EL10Ac4g08382 Beta vulgaris HOM05D002452 ORTHO05D006766 2.9e-118 429.9 557 49.4
TAR636G0392 Trochodendron aralioides HOM05D001914 ORTHO05D006766 5.0e-118 429.1 561 49.6
Ca_03951_v3 Cicer arietinum L. HOM05D002452 ORTHO05D006766 1.1e-117 427.9 542 51.1
DCAR_013269 Daucus carota HOM05D002452 ORTHO05D006766 2.5e-117 426.8 587 48.4
HanXRQChr15g0495181 Helianthus annuus HOM05D002452 ORTHO05D006766 3.6e-116 422.9 538 51.3
VMungo1080G0044 Vigna mungo HOM05D002452 ORTHO05D006766 1.0e-115 421.4 540 51.7
THA.LOC104808089 Tarenaya hassleriana HOM05D002452 ORTHO05D006766 1.4e-115 421.0 539 50.6
Oeu025328.2 Olea europaea HOM05D002452 ORTHO05D006766 3.9e-115 419.5 546 51.3
SGA_v2.0_scaffold181G39753 Striga asiatica HOM05D002452 ORTHO05D006766 3.9e-115 419.5 545 49.4
PGSC0003DMG400021257 Solanum tuberosum HOM05D002452 ORTHO05D006766 2.2e-113 413.7 639 46.2
Phvul.005G080800 Phaseolus vulgaris HOM05D002452 ORTHO05D006766 6.3e-113 412.1 541 50.3
FvH4_3g18120 Fragaria vesca HOM05D002452 ORTHO05D006766 3.1e-112 409.8 589 47.4
Thhalv10018425m.g Eutrema salsugineum HOM05D002452 ORTHO05D006766 4.1e-112 409.5 536 47.0
Migut.M00711 Erythranthe guttata HOM05D002452 ORTHO05D006766 9.4e-109 398.3 565 47.6
AUR62037577 Chenopodium quinoa HOM05D002452 ORTHO05D006766 2.3e-107 393.7 525 48.6
CARHR072180 Cardamine hirsuta HOM05D002452 ORTHO05D006766 2.6e-106 390.2 535 46.0
Lalb_Chr25g0285731 Lupinus albus HOM05D002452 ORTHO05D006766 1.3e-105 387.9 541 45.8
PSO541G2585 Papaver somniferum HOM05D002452 ORTHO05D006766 8.3e-105 385.2 540 46.3
Sp5g33730 Schrenkiella parvula HOM05D002452 ORTHO05D006766 1.4e-104 384.4 545 47.0
Actinidia07509 Actinidia chinensis HOM05D002452 ORTHO05D006766 3.1e-104 383.3 336 61.3
AL2G39060 Arabidopsis lyrata HOM05D002452 ORTHO05D006766 4.1e-104 382.9 535 45.6
RcHm_v2.0_Chr5g0030521 Rosa chinensis HOM05D002452 ORTHO05D006766 4.1e-104 382.9 564 45.7
ECA236G2857 Erigeron canadensis HOM05D002452 ORTHO05D006766 5.3e-104 382.5 538 46.7
Lsat_1_v5_gn_7_102200 Lactuca sativa HOM05D002452 ORTHO05D006766 5.3e-104 382.5 541 48.8
FAN11G1668 Fragaria x ananassa HOM05D003130 ORTHO05D003547 9.1e-104 381.7 566 46.5
PSO675G8136 Papaver somniferum HOM05D002452 ORTHO05D006766 2.2e-102 377.1 538 45.5
Carub.0002s2550 Capsella rubella HOM05D002452 ORTHO05D006766 8.3e-97 358.6 540 43.1
Aa31LG4G2320 Aethionema arabicum HOM05D002452 ORTHO05D006766 5.4e-96 355.9 585 42.9
AT1G78650 Arabidopsis thaliana HOM05D002452 ORTHO05D006766 1.0e-94 351.7 465 46.5
A07p43910 Brassica napus HOM05D002452 ORTHO05D006766 5.0e-94 349.4 538 44.4
BraA07t31897Z Brassica rapa HOM05D002452 ORTHO05D006766 5.0e-94 349.4 538 44.2
Ah.04g164150 Amaranthus hybridus HOM05D003130 ORTHO05D003547 8.6e-94 348.6 564 44.1
BcaC08g47423 Brassica carinata HOM05D002452 ORTHO05D006766 1.4e-91 341.3 538 43.9
BcaC08g47422 Brassica carinata HOM05D002452 ORTHO05D006766 8.9e-91 338.6 539 43.2
Zm00001eb120810 Zea mays HOM05D002452 ORTHO05D006766 7.5e-90 335.5 542 41.7
CDE04G3284 Ceratophyllum demersum HOM05D002452 ORTHO05D006766 6.3e-89 332.4 557 40.6
FAN16G1664 Fragaria x ananassa HOM05D002452 ORTHO05D006766 6.3e-89 332.4 464 47.4
FAN25G3870 Fragaria x ananassa HOM05D003130 ORTHO05D003547 5.4e-88 329.3 535 43.7
Zm00001eb338160 Zea mays HOM05D002452 ORTHO05D006766 2.7e-87 327.0 531 41.1
Eucgr.F01259 Eucalyptus grandis HOM05D002452 ORTHO05D006766 1.0e-86 325.1 484 44.8
Eucgr.F01317 Eucalyptus grandis HOM05D002452 ORTHO05D006766 1.2e-82 311.6 295 56.6
MD03G1244600 Malus domestica HOM05D002452 ORTHO05D006766 3.4e-82 310.1 319 56.1
HPP92_024061 Vanilla planifolia HOM05D002452 ORTHO05D006766 5.4e-80 302.8 544 41.4
Os01g0204000 Oryza sativa ssp. japonica HOM05D002452 ORTHO05D006766 1.2e-79 301.6 535 40.0
Cpa.g.sc77.52 Carica papaya HOM05D002452 ORTHO05D006766 2.3e-78 297.4 377 50.7
C06p52530 Brassica napus HOM05D002452 ORTHO05D006585 1.2e-74 285.0 498 41.6
BolC6t40272H Brassica oleracea HOM05D002452 ORTHO05D006585 1.2e-74 285.0 498 41.6
Glyma.13G268300 Glycine max HOM05D002452 ORTHO05D006766 4.4e-74 283.1 298 54.0
ATR0012G041 Amborella trichopoda HOM05D002452 ORTHO05D006766 6.4e-73 279.3 540 38.5
SEGI_19501 Sequoiadendron giganteum HOM05D002452 ORTHO05D006766 2.4e-72 277.3 569 37.1
RcHm_v2.0_Chr5g0030351 Rosa chinensis HOM05D002452 ORTHO05D006766 6.6e-62 242.7 440 43.2
Pp3c27_7450 Physcomitrium patens HOM05D002452 ORTHO05D006766 7.3e-61 239.2 484 40.1
RcHm_v2.0_Chr5g0030181 Rosa chinensis HOM05D002452 ORTHO05D006766 2.1e-60 237.7 441 43.1
PSO541G6050 Papaver somniferum HOM05D002452 ORTHO05D006766 7.1e-56 222.6 324 42.3
Hund10543 Selenicereus undatus HOM05D002452 ORTHO05D006766 9.3e-56 222.2 398 41.2
AagrBONN_evm.TU.Sc2ySwM_368.2647 Anthoceros agrestis HOM05D002452 ORTHO05D006766 1.7e-46 191.4 580 32.8
Eucgr.F01264 Eucalyptus grandis HOM05D002452 ORTHO05D006766 3.9e-46 190.3 379 39.3
Mapoly0011s0137 Marchantia polymorpha HOM05D002452 ORTHO05D006766 2.4e-43 181.0 574 31.2
SMO172G0197 Selaginella moellendorffii HOM05D000586 ORTHO05D003356 3.4e-42 177.2 527 31.9
Zm00001eb317290 Zea mays HOM05D002452 ORTHO05D006766 6.7e-38 162.9 261 39.1
SpUn0074_0010 Schrenkiella parvula HOM05D002452 ORTHO05D006766 8.4e-33 146.0 252 46.0
Gohir.A01G051000 Gossypium hirsutum HOM05D002452 ORTHO05D006766 2.5e-32 144.4 100 75.0
CBR_g36415 Chara braunii HOM05D002452 ORTHO05D006766 7.9e-31 139.4 181 41.4
MD03G1244500 Malus domestica HOM05D002452 ORTHO05D006766 1.1e-27 129.0 181 49.2
Zm00001eb370750 Zea mays HOM05D002452 ORTHO05D006766 8.4e-25 119.4 247 36.0
RcHm_v2.0_Chr5g0030251 Rosa chinensis HOM05D002452 ORTHO05D006766 7.4e-21 106.3 129 51.2
Zm00001eb002150 Zea mays HOM05D002452 ORTHO05D006766 1.3e-17 95.5 199 34.2
Cre03.g202250 Chlamydomonas reinhardtii HOM05D002452 ORTHO05D006766 4.2e-16 90.5 165 30.9
Zm00001eb309500 Zea mays HOM05D002452 ORTHO05D006766 7.2e-16 89.7 53 71.7
Zm00001eb137460 Zea mays HOM05D002452 ORTHO05D006766 7.9e-15 86.3 211 33.6
Zm00001eb409150 Zea mays HOM05D002452 ORTHO05D006766 1.5e-13 82.0 199 34.7
unitig_746.g26692 Utricularia gibba HOM05D002418 ORTHO05D002572 1.1e-11 75.9 88 58.0
MCO14G309 Micromonas commoda HOM05D002452 ORTHO05D006766 2.4e-11 74.7 159 31.4
Zm00001eb024250 Zea mays HOM05D002452 ORTHO05D006766 2.4e-11 74.7 184 34.2
Zm00001eb017750 Zea mays HOM05D002452 ORTHO05D006766 1.7e-09 68.6 117 41.0
Zm00001eb038850 Zea mays HOM05D002452 ORTHO05D006766 1.7e-09 68.6 117 41.0
Zm00001eb100520 Zea mays HOM05D002452 ORTHO05D006766 1.7e-09 68.6 117 41.0
Zm00001eb188790 Zea mays HOM05D002452 ORTHO05D006766 1.7e-09 68.6 117 41.0
Zm00001eb319080 Zea mays HOM05D002452 ORTHO05D006766 1.7e-09 68.6 117 41.0
Zm00001eb343810 Zea mays HOM05D002452 ORTHO05D006766 1.7e-09 68.6 117 41.0
Zm00001eb309510 Zea mays HOM05D002452 ORTHO05D006766 9.4e-08 62.8 94 42.6
Haze_09303 Corylus avellana HOM05D000808 ORTHO05D000863 1.6e-07 62.0 37 78.4
DCAR_032089 Daucus carota HOM05D002452 ORTHO05D006766 2.3e-06 58.2 55 61.8
Hma1.2p1_0081F.1_g042300 Hydrangea macrophylla HOM05D002452 ORTHO05D006766 2.3e-06 58.2 62 56.5


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