Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 9.1e-145 518.1 595 100.0
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 2.6e-144 516.5 595 99.8
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 1.8e-129 467.2 602 95.5
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 9.2e-113 411.8 602 90.5
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 2.6e-107 393.7 598 88.1
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 1.9e-102 377.5 602 87.4
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 3.3e-86 323.6 619 80.0
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 2.1e-85 320.9 602 81.4
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 9.9e-83 312.0 612 80.7
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 1.3e-82 311.6 604 81.5
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 7.1e-81 305.8 592 80.6
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 6.0e-80 302.8 618 79.6
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 1.7e-79 301.2 609 79.5
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 3.3e-78 297.0 610 80.0
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 3.3e-78 297.0 610 80.0
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 3.6e-77 293.5 609 79.8
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 1.3e-74 285.0 620 78.7
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 1.7e-74 284.6 597 77.6
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 2.2e-74 284.3 610 75.9
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 4.9e-74 283.1 610 75.9
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 4.9e-74 283.1 617 76.3
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 1.9e-73 281.2 579 62.0
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 3.2e-73 280.4 584 80.1
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 5.4e-73 279.6 642 65.7
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 9.3e-73 278.9 558 82.3
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.7e-72 277.3 604 77.5
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 3.0e-71 273.9 603 79.6
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 1.9e-70 271.2 618 77.3
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 4.3e-70 270.0 609 77.7
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 7.4e-70 269.2 609 75.9
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 9.6e-70 268.9 612 76.6
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 2.1e-69 267.7 613 76.5
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 1.1e-68 265.4 613 76.5
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 6.9e-68 262.7 621 76.3
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 6.9e-68 262.7 615 75.8
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 4.5e-67 260.0 603 76.0
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 4.9e-66 256.5 553 81.6
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 8.4e-66 255.8 603 76.8
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.4e-65 255.0 618 67.3
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 1.9e-65 254.6 598 77.1
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 7.1e-65 252.7 596 77.3
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 9.3e-65 252.3 604 76.5
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.6e-64 251.5 606 71.8
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 3.0e-63 247.3 636 70.9
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 1.1e-62 245.4 559 81.2
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 1.5e-62 245.0 610 76.2
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 2.5e-62 244.2 554 81.4
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 3.3e-62 243.8 598 76.8
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 5.6e-62 243.0 564 79.1
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 1.6e-61 241.5 597 76.7
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 1.6e-61 241.5 560 78.9
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 4.8e-61 240.0 534 81.3
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 8.1e-61 239.2 560 78.8
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 1.4e-60 238.4 603 76.9
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 1.8e-60 238.0 581 78.0
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 1.8e-60 238.0 626 72.8
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 6.9e-60 236.1 555 80.4
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 9.0e-60 235.7 581 64.2
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 1.5e-59 235.0 614 75.4
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.5e-59 235.0 415 72.8
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 2.0e-59 234.6 560 79.6
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 5.8e-59 233.0 606 74.9
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 3.8e-58 230.3 604 75.8
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 1.1e-57 228.8 560 71.1
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 1.6e-56 224.9 555 79.8
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 7.9e-56 222.6 607 76.1
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 1.3e-55 221.9 627 72.6
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 1.8e-55 221.5 627 72.4
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 1.8e-55 221.5 553 79.0
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 6.7e-55 219.5 225 60.4
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 1.1e-54 218.8 590 75.1
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 1.5e-54 218.4 558 78.7
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 4.3e-54 216.9 608 74.8
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 5.7e-54 216.5 664 69.6
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 9.6e-54 215.7 596 74.8
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 9.6e-54 215.7 596 74.8
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 3.7e-53 213.8 553 79.6
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 3.7e-53 213.8 553 79.7
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 3.7e-53 213.8 553 79.7
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 4.8e-53 213.4 229 56.8
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 9.0e-52 209.1 566 66.8
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 1.5e-51 208.4 225 52.9
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 3.4e-51 207.2 174 63.2
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 4.5e-51 206.8 556 78.4
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 4.5e-51 206.8 575 76.5
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 1.3e-50 205.3 176 62.5
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 5.0e-50 203.4 221 51.1
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 1.1e-49 202.2 556 77.9
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 1.4e-49 201.8 168 63.1
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 7.2e-49 199.5 162 63.6
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 2.7e-48 197.6 542 76.2
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 3.6e-48 197.2 242 51.7
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 1.3e-47 195.3 214 53.7
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 1.8e-47 194.9 596 59.7
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 5.1e-47 193.4 226 51.8
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 9.7e-46 189.1 258 46.9
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 9.7e-46 189.1 489 84.3
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 1.3e-45 188.7 471 88.1
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 2.8e-45 187.6 607 72.3
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 6.3e-45 186.4 501 80.8
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 7.7e-43 179.5 216 51.4
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 2.1e-40 171.4 213 50.2
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 2.6e-38 164.5 204 49.0
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 2.6e-38 164.5 579 72.9
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.7e-38 163.3 183 54.6
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.7e-38 163.3 183 54.6
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 9.7e-38 162.5 543 71.1
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 3.7e-37 160.6 118 66.1
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 4.1e-36 157.1 549 74.5
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 4.5e-35 153.7 118 65.3
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 1.0e-31 142.5 182 47.3
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 2.4e-28 131.3 561 72.2
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.9e-25 121.7 238 90.3
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 1.6e-24 118.6 230 39.1
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 1.1e-20 105.9 174 42.5
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 6.5e-18 96.7 213 36.6
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 7.2e-17 93.2 405 66.2
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 5.2e-15 87.0 227 85.0
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 3.4e-14 84.3 170 37.1
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 9.8e-14 82.8 57 64.9
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 2.0e-11 75.1 560 66.2
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 2.0e-11 75.1 560 66.2
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 3.2e-09 67.8 64 51.6
CBR_g61650 Chara braunii HOM05D006250 ORTHO05D007107 2.1e-08 65.1 240 77.9
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 4.7e-08 63.9 148 33.1


User provided reference genes

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