Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.009G328900 Gossypium raimondii HOM05D000445 ORTHO05D000314 1.4e-41 172.6 86 100.0
Nitab4.5_0027450g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.2e-23 112.1 71 80.3
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 2.4e-22 108.6 75 78.7
Solyc00g500148.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.3e-22 107.5 71 77.5
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 7.0e-22 107.1 82 69.5
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 7.0e-22 107.1 73 75.3
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 7.0e-22 107.1 73 75.3
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 2.0e-21 105.5 76 75.0
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 4.5e-21 104.4 82 68.3
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 4.5e-21 104.4 82 68.3
Nn070s42380 Nelumbo nucifera HOM05D000445 ORTHO05D000314 5.9e-21 104.0 72 75.0
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 5.9e-21 104.0 72 75.0
Eucgr.G01321 Eucalyptus grandis HOM05D000445 ORTHO05D000314 7.7e-21 103.6 74 73.0
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 7.7e-21 103.6 72 75.0
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 1.7e-20 102.4 74 75.7
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 1.7e-20 102.4 74 75.7
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 2.2e-20 102.1 72 73.6
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 3.8e-20 101.3 75 73.3
BolSC49t61128H Brassica oleracea HOM05D000445 ORTHO05D000314 3.8e-20 101.3 75 73.3
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 3.8e-20 101.3 75 73.3
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 3.8e-20 101.3 75 73.3
BraSC143t45643Z Brassica rapa HOM05D000445 ORTHO05D000314 3.8e-20 101.3 75 73.3
BraSC179t45786Z Brassica rapa HOM05D000445 ORTHO05D000314 3.8e-20 101.3 75 73.3
BraSC59t46524Z Brassica rapa HOM05D000445 ORTHO05D000314 3.8e-20 101.3 75 73.3
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 3.8e-20 101.3 72 73.6
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 5.0e-20 100.9 73 72.6
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 5.0e-20 100.9 73 72.6
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 6.5e-20 100.5 75 72.0
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 1.5e-19 99.4 73 71.2
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 1.5e-19 99.4 73 71.2
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQChr00c0434g0574681 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQChr00c0585g0576241 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
Lsat_1_v5_gn_3_105620 Lactuca sativa HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
Lsat_1_v5_gn_9_18701 Lactuca sativa HOM05D000445 ORTHO05D000314 1.9e-19 99.0 72 72.2
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 3.2e-19 98.2 72 72.2
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 1.2e-18 96.3 72 70.8
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 1.6e-18 95.9 72 70.8
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 2.7e-18 95.1 81 65.4
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 3.6e-18 94.7 71 71.8
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 3.6e-18 94.7 72 68.1
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 4.7e-18 94.4 77 70.1
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 4.7e-18 94.4 77 70.1
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 4.7e-18 94.4 77 70.1
Gorai.011G141200 Gossypium raimondii HOM05D000445 ORTHO05D000314 4.7e-18 94.4 72 69.4
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 4.7e-18 94.4 72 69.4
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 4.7e-18 94.4 72 69.4
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 4.7e-18 94.4 72 69.4
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 6.1e-18 94.0 70 71.4
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 6.1e-18 94.0 70 71.4
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.0e-18 93.6 71 70.4
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.0e-18 93.6 71 70.4
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.0e-18 93.6 71 70.4
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.0e-18 93.6 71 70.4
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.0e-18 93.6 71 70.4
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.0e-18 93.6 71 70.4
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.4e-17 92.8 81 64.2
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.4e-17 92.8 81 64.2
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.4e-17 92.8 81 64.2
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.4e-17 92.8 81 64.2
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.4e-17 92.8 81 64.2
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.4e-17 92.8 81 64.2
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 1.8e-17 92.4 75 69.3
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 5.2e-17 90.9 73 68.5
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 8.8e-17 90.1 73 69.9
EL10Ac1g00652 Beta vulgaris HOM05D000445 ORTHO05D000314 1.5e-16 89.4 67 71.6
HanXRQChr11g0336101 Helianthus annuus HOM05D000445 ORTHO05D000314 1.5e-16 89.4 72 68.1
HanXRQChr11g0336121 Helianthus annuus HOM05D000445 ORTHO05D000314 1.5e-16 89.4 72 68.1
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-16 88.2 72 66.7
Nitab4.5_0023562g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 7.5e-16 87.0 50 86.0
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 9.8e-16 86.7 71 69.0
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-15 85.9 81 61.7
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-15 85.9 81 61.7
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-15 85.9 81 61.7
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-15 85.9 81 61.7
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.7e-15 85.9 81 61.7
Nitab4.5_0001761g0270 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.7e-15 85.9 71 66.2
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 2.8e-15 85.1 67 65.7
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.1e-14 80.1 81 58.0
Lsat_1_v5_gn_9_42020 Lactuca sativa HOM05D000445 ORTHO05D000314 3.5e-13 78.2 71 60.6
HanXRQChr00c0533g0575561 Helianthus annuus HOM05D000445 ORTHO05D000314 5.9e-13 77.4 47 85.1
HanXRQChr11g0326541 Helianthus annuus HOM05D000445 ORTHO05D000314 5.9e-13 77.4 47 85.1
arahy.Tifrunner.gnm1.ann1.R6YYA0 Arachis hypogaea HOM05D000445 ORTHO05D000314 1.7e-12 75.9 84 52.4
BolSC37t60781H Brassica oleracea HOM05D000445 ORTHO05D000314 1.1e-11 73.2 56 71.4
RcHm_v2.0_Chr2g0118441 Rosa chinensis HOM05D000445 ORTHO05D000314 1.1e-11 73.2 47 83.0
Nitab4.5_0000223g0170 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.5e-11 72.8 80 52.5
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 1.9e-11 72.4 77 57.1
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 3.3e-11 71.6 60 68.3
Oeu062847.1 Olea europaea HOM05D000445 ORTHO05D000314 3.3e-11 71.6 50 72.0
Gorai.007G214200 Gossypium raimondii HOM05D000445 ORTHO05D000314 7.2e-11 70.5 57 70.2
unitig_91.g26515 Utricularia gibba HOM05D000445 ORTHO05D000314 1.2e-10 69.7 39 87.2
Lsat_1_v5_gn_7_67161 Lactuca sativa HOM05D000445 ORTHO05D000314 8.0e-10 67.0 35 91.4
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.0e-09 66.6 48 77.1
Eucgr.G00737 Eucalyptus grandis HOM05D000445 ORTHO05D000314 1.4e-09 66.2 42 78.6
Oeu062872.1 Olea europaea HOM05D000445 ORTHO05D000314 1.4e-09 66.2 39 82.1
Aqoxy3G01862 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 3.0e-09 65.1 70 58.6
TPR.G25940 Trifolium pratense HOM05D000445 ORTHO05D000314 3.0e-09 65.1 72 54.2
Oeu062827.1 Olea europaea HOM05D000445 ORTHO05D000314 1.2e-08 63.2 47 74.5
Solyc10g018980.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.5e-08 62.8 39 82.1
Solyc12g035960.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.6e-08 62.0 54 66.7
Oeu012817.1 Olea europaea HOM05D000445 ORTHO05D000314 3.4e-08 61.6 71 52.1
Lalb_Chr25g0281941 Lupinus albus HOM05D000445 ORTHO05D000314 3.7e-07 58.2 32 87.5
Nn020s41480 Nelumbo nucifera HOM05D000445 ORTHO05D000314 8.3e-07 57.0 47 63.8
Nitab4.5_0020349g0060 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.1e-06 56.6 54 59.3
Nitab4.5_0005831g0050 Nicotiana tabacum HOM05D002660 ORTHO05D000314 3.1e-06 55.1 39 71.8
Nitab4.5_0007104g0120 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.1e-06 54.7 31 80.6
HanXRQChr11g0333811 Helianthus annuus HOM05D000445 ORTHO05D000314 7.0e-06 53.9 80 47.5
Migut.D01323 Erythranthe guttata HOM05D000445 ORTHO05D000314 9.2e-06 53.5 29 89.7
Gorai.011G122200 Gossypium raimondii HOM05D000445 ORTHO05D000314 9.2e-06 53.5 73 46.6


User provided reference genes

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