Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D05G276800 Gossypium hirsutum HOM05D022057 ORTHO05D019046 1.6e-40 169.1 91 100.0
Gohir.D05G276900 Gossypium hirsutum HOM05D022057 ORTHO05D019046 1.6e-40 169.1 91 100.0
Gorai.009G289800 Gossypium raimondii HOM05D022057 ORTHO05D019046 1.6e-40 169.1 91 100.0
Gorai.009G289900 Gossypium raimondii HOM05D022057 ORTHO05D019046 1.6e-40 169.1 91 100.0
Gohir.A05G274600 Gossypium hirsutum HOM05D022057 ORTHO05D019046 4.6e-40 167.5 91 92.3
Duzib177G0644 Durio zibethinus HOM05D000270 ORTHO05D019046 3.0e-23 111.7 96 62.5
Duzib116G0570 Durio zibethinus HOM05D000270 ORTHO05D016962 3.7e-21 104.8 96 59.4
Duzib177G0388 Durio zibethinus HOM05D000270 ORTHO05D016962 1.2e-19 99.8 104 59.6
Thecc.08G182500 Theobroma cacao HOM05D000270 ORTHO05D019046 1.2e-19 99.8 96 58.3
Gohir.D02G065800 Gossypium hirsutum HOM05D020119 ORTHO05D016962 2.2e-13 79.0 97 47.4
Gorai.005G074600 Gossypium raimondii HOM05D020119 ORTHO05D016962 2.2e-13 79.0 97 47.4
Gohir.A02G060300 Gossypium hirsutum HOM05D020119 ORTHO05D016962 8.2e-13 77.0 99 45.5
Lalb_Chr03g0036191 Lupinus albus HOM05D000270 ORTHO05D000163 1.5e-11 72.8 98 42.9
Eucgr.F04125 Eucalyptus grandis HOM05D000270 ORTHO05D000163 2.2e-10 68.9 98 39.8
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 3.8e-10 68.2 95 42.1
Aqoxy5G02596 Aquilegia oxysepala HOM05D000270 ORTHO05D000163 6.5e-10 67.4 96 44.8
Glyma.10G216100 Glycine max HOM05D000270 ORTHO05D000163 1.1e-09 66.6 98 36.7
Potri.013G113400 Populus trichocarpa HOM05D000270 ORTHO05D000163 1.1e-09 66.6 95 41.1
Lalb_Chr06g0162061 Lupinus albus HOM05D000270 ORTHO05D000163 1.4e-09 66.2 99 39.4
Medtr1g096370 Medicago truncatula HOM05D000270 ORTHO05D000163 2.5e-09 65.5 100 39.0
TPR.G8828 Trifolium pratense HOM05D000270 ORTHO05D000163 3.2e-09 65.1 100 42.0
CSS0043248 Camellia sinensis var. sinensis HOM05D000270 ORTHO05D000163 4.2e-09 64.7 96 39.6
Glyma.10G216000 Glycine max HOM05D000270 ORTHO05D000163 4.2e-09 64.7 98 37.8
arahy.Tifrunner.gnm1.ann1.6NEU1T Arachis hypogaea HOM05D000270 ORTHO05D000163 1.2e-08 63.2 105 38.1
MSTRG.25439 Avicennia marina HOM05D000270 ORTHO05D000163 1.2e-08 63.2 96 41.7
Lj5g0019014 Lotus japonicus HOM05D000270 ORTHO05D000163 1.2e-08 63.2 104 40.4
Glyma.20G175800 Glycine max HOM05D000270 ORTHO05D000163 1.6e-08 62.8 100 39.0
Os05g0432200 Oryza sativa ssp. japonica HOM05D000270 ORTHO05D000163 2.7e-08 62.0 90 44.4
Atru.chr13.1785 Acer truncatum HOM05D000270 ORTHO05D000163 3.6e-08 61.6 95 38.9
arahy.Tifrunner.gnm1.ann1.IN1Z0G Arachis hypogaea HOM05D000270 ORTHO05D000163 3.6e-08 61.6 105 37.1
Phvul.007G089800 Phaseolus vulgaris HOM05D000270 ORTHO05D000163 3.6e-08 61.6 100 37.0
Psat6g187360 Pisum sativum HOM05D000270 ORTHO05D000163 3.6e-08 61.6 100 40.0
arahy.Tifrunner.gnm1.ann1.50JJZL Arachis hypogaea HOM05D000270 ORTHO05D000163 4.7e-08 61.2 105 37.1
arahy.Tifrunner.gnm1.ann1.GQW4DS Arachis hypogaea HOM05D000270 ORTHO05D000163 4.7e-08 61.2 105 37.1
arahy.Tifrunner.gnm1.ann1.PX38R1 Arachis hypogaea HOM05D000270 ORTHO05D000163 4.7e-08 61.2 105 37.1
arahy.Tifrunner.gnm1.ann1.RF89RI Arachis hypogaea HOM05D000270 ORTHO05D000163 4.7e-08 61.2 103 35.9
Ca_10613_v3 Cicer arietinum L. HOM05D000270 ORTHO05D000163 4.7e-08 61.2 100 37.0
arahy.Tifrunner.gnm1.ann1.I1ZCNY Arachis hypogaea HOM05D000270 ORTHO05D000163 6.1e-08 60.8 99 37.4
Nn5g27723 Nelumbo nucifera HOM05D000270 ORTHO05D000163 1.0e-07 60.1 98 38.8
Cc00_g32380 Coffea canephora HOM05D000270 ORTHO05D000163 1.8e-07 59.3 97 42.3
SMO239G0050 Selaginella moellendorffii HOM05D000270 ORTHO05D000163 1.8e-07 59.3 62 59.7
TAR624G1343 Trochodendron aralioides HOM05D000270 ORTHO05D000163 1.8e-07 59.3 98 34.7
Zm00001eb348690 Zea mays HOM05D000270 ORTHO05D000163 1.8e-07 59.3 94 38.3
arahy.Tifrunner.gnm1.ann1.M8TEG5 Arachis hypogaea HOM05D000270 ORTHO05D000163 3.0e-07 58.5 105 36.2
Lsat_1_v5_gn_2_84540 Lactuca sativa HOM05D000270 ORTHO05D000163 1.1e-06 56.6 61 44.3
Aa31LG9G14910 Aethionema arabicum HOM05D000270 ORTHO05D000163 1.5e-06 56.2 101 40.6
HanXRQChr12g0373281 Helianthus annuus HOM05D000270 ORTHO05D000163 1.5e-06 56.2 62 50.0
arahy.Tifrunner.gnm1.ann1.FBS0NK Arachis hypogaea HOM05D000270 ORTHO05D000163 2.0e-06 55.8 106 34.9
EL10Ac5g11014 Beta vulgaris HOM05D000270 ORTHO05D000163 2.0e-06 55.8 96 40.6
CARHR273430 Cardamine hirsuta HOM05D000270 ORTHO05D000163 2.0e-06 55.8 72 37.5
Lsat_1_v5_gn_4_162220 Lactuca sativa HOM05D000270 ORTHO05D000163 2.0e-06 55.8 61 60.7
Sopen11g009390 Solanum pennellii HOM05D000270 ORTHO05D000163 2.0e-06 55.8 66 54.5
PGSC0003DMG400009244 Solanum tuberosum HOM05D000270 ORTHO05D000163 2.0e-06 55.8 66 54.5
GSVIVG01034476001 Vitis vinifera HOM05D000270 ORTHO05D000163 2.0e-06 55.8 62 45.2
BcaB05g22592 Brassica carinata HOM05D000270 ORTHO05D000163 2.6e-06 55.5 61 42.6
BcaC07g38576 Brassica carinata HOM05D000270 ORTHO05D000163 2.6e-06 55.5 61 44.3
A08p33880 Brassica napus HOM05D000270 ORTHO05D000163 2.6e-06 55.5 61 44.3
C08p13820 Brassica napus HOM05D000270 ORTHO05D000163 2.6e-06 55.5 61 44.3
BolC8t49017H Brassica oleracea HOM05D000270 ORTHO05D000163 2.6e-06 55.5 61 44.3
BraA08t35302Z Brassica rapa HOM05D000270 ORTHO05D000163 2.6e-06 55.5 61 44.3
Thhalv10009615m.g Eutrema salsugineum HOM05D000270 ORTHO05D000163 2.6e-06 55.5 61 44.3
Glyma.17G258200 Glycine max HOM05D000270 ORTHO05D000163 2.6e-06 55.5 66 40.9
ECA238G3488 Erigeron canadensis HOM05D000270 ORTHO05D000163 3.3e-06 55.1 62 45.2
CSS0009594 Camellia sinensis var. sinensis HOM05D000270 ORTHO05D000163 4.4e-06 54.7 61 45.9
CSS0015778 Camellia sinensis var. sinensis HOM05D000270 ORTHO05D000163 4.4e-06 54.7 61 45.9
PSO063G2937 Papaver somniferum HOM05D000270 ORTHO05D000163 4.4e-06 54.7 102 39.2
Sp6g21530 Schrenkiella parvula HOM05D000270 ORTHO05D000163 4.4e-06 54.7 61 42.6
Solyc11g017440.3 Solanum lycopersicum HOM05D000270 ORTHO05D000163 4.4e-06 54.7 66 53.0
THA.LOC104826948 Tarenaya hassleriana HOM05D000270 ORTHO05D000163 4.4e-06 54.7 69 40.6
TPR.G18323 Trifolium pratense HOM05D000270 ORTHO05D000163 4.4e-06 54.7 66 43.9
MSTRG.1194 Avicennia marina HOM05D000270 ORTHO05D000163 5.7e-06 54.3 68 39.7
BcaC01g04712 Brassica carinata HOM05D000270 ORTHO05D000163 5.7e-06 54.3 62 43.5
BolC3t15772H Brassica oleracea HOM05D000270 ORTHO05D000163 5.7e-06 54.3 62 43.5
MELO3C011008.2 Cucumis melo HOM05D000270 ORTHO05D000163 5.7e-06 54.3 89 36.0
Glyma.14G219100 Glycine max HOM05D000270 ORTHO05D000163 5.7e-06 54.3 92 38.0
Lalb_Chr02g0156431 Lupinus albus HOM05D000270 ORTHO05D000163 5.7e-06 54.3 71 40.8
Psat0s2968g0040 Pisum sativum HOM05D000270 ORTHO05D000163 5.7e-06 54.3 69 42.0
arahy.Tifrunner.gnm1.ann1.6KJ02L Arachis hypogaea HOM05D000270 ORTHO05D000163 7.4e-06 53.9 72 44.4
arahy.Tifrunner.gnm1.ann1.RM9G1V Arachis hypogaea HOM05D000270 ORTHO05D000163 7.4e-06 53.9 72 44.4
C03p13250 Brassica napus HOM05D000270 ORTHO05D000163 7.4e-06 53.9 72 38.9
Lalb_Chr20g0110271 Lupinus albus HOM05D000270 ORTHO05D000163 7.4e-06 53.9 71 39.4
SMO351G0340 Selaginella moellendorffii HOM05D000270 ORTHO05D000163 7.4e-06 53.9 62 43.5
Hund07452 Selenicereus undatus HOM05D000270 ORTHO05D000163 7.4e-06 53.9 71 39.4
SEGI_00279 Sequoiadendron giganteum HOM05D000270 ORTHO05D000163 7.4e-06 53.9 79 38.0
SEGI_23311 Sequoiadendron giganteum HOM05D000270 ORTHO05D000163 7.4e-06 53.9 62 43.5
TPR.G27664 Trifolium pratense HOM05D000270 ORTHO05D000163 7.4e-06 53.9 65 40.0
Glyma.02G191950 Glycine max HOM05D000270 ORTHO05D000163 9.7e-06 53.5 69 42.0
Lalb_Chr22g0354331 Lupinus albus HOM05D000270 ORTHO05D000163 9.7e-06 53.5 66 39.4
MBI09_g08435_MAGBIO Magnolia biondii HOM05D000270 ORTHO05D000163 9.7e-06 53.5 68 41.2
Medtr1g025220 Medicago truncatula HOM05D000270 ORTHO05D000163 9.7e-06 53.5 66 39.4


User provided reference genes

Program Settings