Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.009G227900 Gossypium raimondii HOM05D007802 ORTHO05D009879 1.8e-45 185.7 101 100.0
Gohir.D05G220800 Gossypium hirsutum HOM05D007802 ORTHO05D009879 2.4e-45 185.3 101 99.0
Gohir.A05G216600 Gossypium hirsutum HOM05D007802 ORTHO05D009879 4.8e-38 161.0 94 92.6
COL.COLO4_35287 Corchorus olitorius HOM05D007802 ORTHO05D009879 7.2e-18 94.0 100 59.0
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 9.4e-18 93.6 104 56.7
Thecc.08G074100 Theobroma cacao HOM05D007802 ORTHO05D009879 5.1e-16 87.8 69 69.6
GSVIVG01009214001 Vitis vinifera HOM05D007802 ORTHO05D009879 2.6e-15 85.5 84 59.5
RcHm_v2.0_Chr7g0233751 Rosa chinensis HOM05D007802 ORTHO05D009879 1.3e-14 83.2 80 61.2
QL09p018673 Quercus lobata HOM05D007802 ORTHO05D009879 1.7e-14 82.8 99 54.5
TAR628G0546 Trochodendron aralioides HOM05D007802 ORTHO05D009879 2.2e-14 82.4 67 64.2
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 2.8e-14 82.0 69 65.2
CiPaw.08G057300 Carya illinoinensis HOM05D007802 ORTHO05D009879 4.8e-14 81.3 73 58.9
Nn5g29812 Nelumbo nucifera HOM05D007802 ORTHO05D009879 4.8e-14 81.3 85 56.5
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 6.3e-14 80.9 98 50.0
Cfa013816 Carpinus fangiana HOM05D007802 ORTHO05D009879 6.3e-14 80.9 77 62.3
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 6.3e-14 80.9 77 58.4
FvH4_5g34160 Fragaria vesca HOM05D007802 ORTHO05D009879 6.3e-14 80.9 80 60.0
Prupe.1G536500 Prunus persica HOM05D007802 ORTHO05D009879 6.3e-14 80.9 95 54.7
Ciclev10002961m.g Citrus clementina HOM05D007802 ORTHO05D009879 1.4e-13 79.7 99 55.6
Haze_22490 Corylus avellana HOM05D007802 ORTHO05D009879 1.4e-13 79.7 99 52.5
Dinv42589 Davidia involucrata HOM05D007802 ORTHO05D009879 1.4e-13 79.7 93 52.7
MD08G1204300 Malus domestica HOM05D007802 ORTHO05D009879 1.8e-13 79.3 65 66.2
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 9.1e-13 77.0 67 59.7
FvH4_4g29130 Fragaria vesca HOM05D007802 ORTHO05D009879 1.6e-12 76.3 80 60.0
FAN12G4209 Fragaria x ananassa HOM05D007802 ORTHO05D009879 1.6e-12 76.3 80 60.0
Lalb_Chr17g0344631 Lupinus albus HOM05D007802 ORTHO05D009879 1.6e-12 76.3 73 58.9
MBI16_g07278_MAGBIO Magnolia biondii HOM05D007802 ORTHO05D009879 2.0e-12 75.9 83 54.2
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 2.0e-12 75.9 72 56.9
SalBow7G0598 Salvia bowleyana HOM05D007802 ORTHO05D009879 2.6e-12 75.5 67 61.2
Sabra02G0086800 Salix brachista HOM05D007802 ORTHO05D009879 5.9e-12 74.3 71 57.7
arahy.Tifrunner.gnm1.ann1.6VNW8E Arachis hypogaea HOM05D007802 ORTHO05D009879 7.7e-12 73.9 89 47.2
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 1.7e-11 72.8 95 46.3
Glyma.02G216200 Glycine max HOM05D007802 ORTHO05D009879 2.2e-11 72.4 89 48.3
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 1.1e-10 70.1 83 47.0
Ca_05474_v3 Cicer arietinum L. HOM05D007802 ORTHO05D009879 1.1e-10 70.1 84 50.0
Atru.chr13.972 Acer truncatum HOM05D007802 ORTHO05D009879 1.5e-10 69.7 71 52.1
FAN07G2104 Fragaria x ananassa HOM05D007802 ORTHO05D009879 1.9e-10 69.3 66 59.1
Oeu040885.1 Olea europaea HOM05D007802 ORTHO05D009879 2.5e-10 68.9 92 50.0
ATR0767G120 Amborella trichopoda HOM05D007802 ORTHO05D009879 7.2e-10 67.4 72 48.6
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 9.4e-10 67.0 83 44.6
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 9.4e-10 67.0 83 44.6
Rhsim07G0213800 Rhododendron simsii HOM05D007802 ORTHO05D009879 9.4e-10 67.0 89 48.3
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 1.6e-09 66.2 78 47.4
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 1.6e-09 66.2 83 44.6
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 2.1e-09 65.9 83 44.6
CANSAT78G0113 Cannabis sativa HOM05D007802 ORTHO05D009879 2.7e-09 65.5 67 56.7
ClCG08G011540 Citrullus lanatus HOM05D007802 ORTHO05D009879 2.7e-09 65.5 95 42.1
FAN08G3003 Fragaria x ananassa HOM05D007802 ORTHO05D009879 2.7e-09 65.5 109 44.0
FAN18G1081 Fragaria x ananassa HOM05D007802 ORTHO05D009879 2.7e-09 65.5 109 44.0
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 3.6e-09 65.1 77 48.1
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 3.6e-09 65.1 83 43.4
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 3.6e-09 65.1 71 50.7
Psat2g064360 Pisum sativum HOM05D007802 ORTHO05D009879 3.6e-09 65.1 82 43.9
PGR042G2061 Punica granatum HOM05D007802 ORTHO05D009879 3.6e-09 65.1 74 55.4
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 4.7e-09 64.7 83 47.0
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 6.1e-09 64.3 75 46.7
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 6.1e-09 64.3 83 47.0
DCAR_019323 Daucus carota HOM05D007802 ORTHO05D009879 8.0e-09 63.9 65 56.9
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 8.0e-09 63.9 88 44.3
TWI56G1155 Tripterygium wilfordii HOM05D007802 ORTHO05D009879 8.0e-09 63.9 77 49.4
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 3.0e-08 62.0 71 45.1
arahy.Tifrunner.gnm1.ann1.J1FBU0 Arachis hypogaea HOM05D007802 ORTHO05D009879 4.0e-08 61.6 75 42.7
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 4.0e-08 61.6 83 45.8
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 4.0e-08 61.6 71 47.9
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 5.2e-08 61.2 71 47.9
Medtr5g066760 Medicago truncatula HOM05D007802 ORTHO05D009879 6.7e-08 60.8 87 42.5
Sed0007651 Sechium edule HOM05D007802 ORTHO05D009879 6.7e-08 60.8 94 40.4
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 6.7e-08 60.8 95 43.2
Aa31LG1G14150 Aethionema arabicum HOM05D007802 ORTHO05D009879 8.8e-08 60.5 78 43.6
AUR62019113 Chenopodium quinoa HOM05D007802 ORTHO05D009879 1.5e-07 59.7 78 48.7
AUR62014370 Chenopodium quinoa HOM05D007802 ORTHO05D009879 5.7e-07 57.8 88 43.2
Os06g0651200 Oryza sativa ssp. japonica HOM05D007802 ORTHO05D009879 5.7e-07 57.8 76 43.4
Nitab4.5_0001601g0070 Nicotiana tabacum HOM05D007802 ORTHO05D009879 7.5e-07 57.4 78 46.2
MELO3C011071.2 Cucumis melo HOM05D007802 ORTHO05D009879 9.7e-07 57.0 93 40.9
Sp4g20790 Schrenkiella parvula HOM05D007802 ORTHO05D009879 1.3e-06 56.6 83 44.6
Solyc08g016415.1 Solanum lycopersicum HOM05D007802 ORTHO05D009879 1.3e-06 56.6 71 45.1
Nitab4.5_0003852g0060 Nicotiana tabacum HOM05D007802 ORTHO05D009879 3.7e-06 55.1 78 44.9
Zm00001eb388760 Zea mays HOM05D007802 ORTHO05D009879 4.8e-06 54.7 56 57.1
Sopen08g006790 Solanum pennellii HOM05D007802 ORTHO05D009879 6.3e-06 54.3 71 45.1
SEGI_04889 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 8.2e-06 53.9 73 43.8


User provided reference genes

Program Settings