Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 4.3e-280 967.2 457 100.0
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 9.4e-275 949.5 457 98.5
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 6.3e-271 936.8 457 96.3
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 2.2e-223 778.9 448 82.1
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 9.5e-219 763.5 460 79.3
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 6.3e-154 548.1 469 59.9
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 1.1e-153 547.4 454 60.4
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 1.2e-152 543.9 469 59.9
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 4.5e-152 542.0 458 59.6
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 2.2e-151 539.7 456 58.8
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.5e-150 537.0 461 59.4
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.5e-150 537.0 455 59.8
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 2.5e-150 536.2 464 60.3
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 2.5e-150 536.2 456 58.6
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.2e-150 535.4 455 59.6
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 5.5e-150 535.0 447 59.1
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 7.2e-150 534.6 469 59.1
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 9.4e-150 534.3 447 58.8
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.6e-149 533.5 461 59.2
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 1.5e-147 526.9 470 57.7
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 7.5e-147 524.6 458 59.4
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 7.0e-145 518.1 470 57.0
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 1.0e-143 514.2 464 56.7
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 5.0e-143 511.9 460 56.5
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 8.5e-143 511.1 470 56.6
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.8e-140 503.4 477 56.4
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.5e-139 500.4 475 56.4
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 2.0e-139 500.0 474 56.5
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 9.8e-139 497.7 452 56.4
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.2e-138 496.5 452 56.2
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 6.3e-138 495.0 472 54.7
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 3.1e-137 492.7 473 52.6
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 9.1e-137 491.1 457 56.2
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 2.0e-136 490.0 458 54.8
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 1.0e-135 487.6 461 54.4
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 4.2e-134 482.3 474 53.0
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 5.5e-134 481.9 448 55.6
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.2e-133 480.7 463 54.4
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.1e-133 479.9 448 55.6
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 6.1e-133 478.4 454 55.3
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 6.1e-133 478.4 448 55.8
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.4e-132 477.2 448 55.6
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.8e-132 476.9 448 57.1
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 2.6e-131 473.0 450 54.7
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 4.9e-130 468.8 464 53.0
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 8.3e-130 468.0 471 54.6
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 1.8e-129 466.8 469 51.8
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 3.1e-129 466.1 478 52.3
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 9.2e-129 464.5 464 51.3
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 1.7e-127 460.3 466 52.1
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 2.3e-127 459.9 459 51.9
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 2.3e-127 459.9 443 53.5
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 2.9e-127 459.5 449 55.5
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 5.0e-127 458.8 465 52.0
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 1.1e-126 457.6 456 51.8
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 1.1e-126 457.6 462 51.3
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 1.9e-126 456.8 464 51.5
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 5.6e-126 455.3 465 51.8
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 5.2e-124 448.7 464 49.8
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 2.6e-123 446.4 464 50.2
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 5.7e-123 445.3 463 52.1
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.3e-122 444.1 467 51.2
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 7.8e-120 434.9 445 50.3
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 7.8e-120 434.9 446 49.8
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 1.1e-118 431.0 467 50.5
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 1.5e-118 430.6 461 49.7
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 1.9e-118 430.3 476 47.5
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 7.3e-118 428.3 445 51.9
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 2.3e-116 423.3 442 52.9
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 3.1e-116 422.9 426 49.8
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 6.8e-116 421.8 441 52.8
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 2.6e-115 419.9 451 49.7
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 9.8e-115 417.9 457 48.1
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 1.7e-114 417.2 454 49.1
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 8.3e-114 414.8 460 48.0
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.1e-113 414.5 467 48.0
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 5.4e-113 412.1 467 48.4
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 7.8e-112 408.3 460 49.6
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 5.0e-111 405.6 445 51.9
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 5.0e-111 405.6 457 47.5
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 6.6e-111 405.2 444 50.9
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 1.1e-110 404.4 440 51.6
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 3.3e-110 402.9 443 49.9
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 3.3e-110 402.9 443 49.9
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 1.1e-108 397.9 492 46.5
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.3e-108 396.7 473 46.3
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 4.0e-108 396.0 439 50.6
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 5.8e-107 392.1 443 49.4
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 1.9e-105 387.1 443 49.2
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 2.4e-105 386.7 250 71.6
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 5.1e-103 379.0 443 47.9
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 9.5e-102 374.8 315 61.3
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.6e-101 374.0 439 46.5
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 3.6e-101 372.9 409 46.0
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 2.0e-99 367.1 445 45.2
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 1.6e-96 357.5 443 47.2
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 1.5e-91 340.9 460 42.6
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 4.8e-85 319.3 324 55.2
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.6e-83 313.5 452 40.9
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.1e-78 298.1 358 44.7
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.0e-72 275.8 287 50.5
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 1.3e-66 258.1 488 34.6
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 2.1e-64 250.8 272 50.7
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 4.8e-61 239.6 321 47.0
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 3.1e-60 236.9 331 40.8
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.4e-52 211.5 518 30.9
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 6.7e-47 192.6 459 30.1
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 5.7e-46 189.5 235 45.5
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 2.4e-44 184.1 384 34.1
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 5.9e-43 179.5 133 63.9
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 6.1e-32 142.9 150 52.0
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 8.8e-31 139.0 548 24.5
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 2.6e-30 137.5 191 40.8
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 2.4e-28 131.0 90 65.6
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.5e-26 122.9 99 55.6
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 2.6e-22 110.9 118 51.7
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.1e-20 105.5 92 60.9
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 5.4e-20 103.2 86 61.6
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.7e-18 98.2 161 37.9
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 2.9e-18 97.4 106 46.2
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 1.5e-17 95.1 93 50.5
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 1.9e-17 94.7 239 31.0
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.1e-16 91.3 91 51.6
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 7.5e-14 82.8 65 56.9


User provided reference genes

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